ID AF363011; SV 1; circular; genomic DNA; STD; VRL; 2754 BP. XX AC AF363011; AF329671; AF337533-AF337534; AF339845; AF363010; XX DT 20-JUN-2001 (Rel. 68, Created) DT 14-JUL-2023 (Rel. 144, Last updated, Version 6) XX DE Cotton leaf curl Multan virus segment A, complete sequence. XX KW . XX OS Cotton leaf curl Multan virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2754 RA Radhakrishnan G., Malathi V.G., Varma A., ?; RT "Fulfilling Koch's postulates and molecular characterization of cotton leaf RT curl Rajasthan virus (CLCuRV)"; RL (in) RL INTERNATIONAL SYMPOSIUM ON MANAGEMENT OF VECTOR-BORNE PLANT VIRUSES:50-0; RL ICRISAT, India (2006) XX RN [2] RP 1-2754 RA Radhakrishnan G., Malathi V.G., Varma A.; RT ; RL Submitted (22-MAR-2001) to the INSDC. RL Advanced Center For Plant Virology, Division of Plant Pathology, Indian RL Agricultural Research Institute, Pusa Road, New Delhi, Delhi 110012, India XX DR MD5; 08d267d18d23149c16771966f1954bd4. DR EuropePMC; PMC3550763; 23637479. XX CC On or before Jun 20, 2001 this sequence version replaced CC AF363010.1, AF329671.1, AF337533.1, AF337534.1, AF339845.1. XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Cotton leaf curl Multan virus" FT /segment="A" FT /isolate="CLCuV-G" FT /mol_type="genomic DNA" FT /country="India: Rajasthan, Sriganganagar" FT /note="isolated from infected cotton plants; Whitefly FT transmissible to Malvaceous and Solanaceous hosts" FT /db_xref="taxon:223252" FT gene 132..488 FT /gene="AV2" FT CDS 132..488 FT /codon_start=1 FT /gene="AV2" FT /product="movement/pre-coat protein" FT /db_xref="GOA:Q77I53" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q77I53" FT /protein_id="AAK64240.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRSYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT EAQDVQDVQKSRCS" FT gene 292..1062 FT /gene="AV1" FT CDS 292..1062 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q99BB3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q99BB3" FT /protein_id="AAG49532.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1065..1469) FT /gene="AC3" FT CDS complement(1065..1469) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q99AS6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q99AS6" FT /protein_id="AAK12947.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNYNTRKALGLHKCFLTFRIWTTLQPQTGLFLRVFKNQVLKYLNNLGVISINL FT VIKAVEHVLYNVIQQTMYVDQYSEIKFKLY" FT gene complement(1162..1614) FT /gene="AC2" FT CDS complement(1162..1614) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:Q99AT1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q99AT1" FT /protein_id="AAK64241.1" FT /translation="MRSSSHLIDPCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSIN FT CHNHGFTHRGTHHCSSSREWRIYLGGSKSPLFQDHQPRQPSIHDEYGHTHDQDPVQLQH FT AESSGTAQVFSNLPNLDDLTASDWSFLKGIQKPSPQISEQSRCNFN" FT gene complement(1511..2599) FT /gene="AC1" FT CDS complement(1511..2599) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiator protein" FT /db_xref="GOA:Q98XR3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q98XR3" FT /protein_id="AAK35221.1" FT /translation="MPPKRNGIYSKNYFITYPKCSLTKEEALSQLLNIQTPTSKKYIRI FT CRELHEDGTPHLHVLIQFEGNFKCQNMRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYTE FT KDGDILDWGQFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHN FT LNANLDRIFQEPPAPYVSPFSSSSFDQVPEELEVWAAENVVSAAARANRPISVVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPRVYSNDAWFNVIDDVNPHYLKHFKEFMGAQKDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWALKNAIFITLDRPMY FT SGTNQSTAQGSEEAQQEEESRS" FT gene complement(2143..2445) FT /gene="AC4" FT CDS complement(2143..2445) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q99AT2" FT /protein_id="AAK64242.1" FT /translation="MGLLTCMFSSSSKGISSARICDSSTWSPQAGQHISIRTYRELNPA FT PTSNPTPRRTGTFSTGGNFRSTEGQQEEGNRQPMTLTPQHLTREVSRRLLESLRN" XX SQ Sequence 2754 BP; 734 A; 556 C; 630 G; 834 T; 0 other; accggatggc cgcgcgattt ttttggtggg ccttaccatt aacacttgtc ggccaatcat 60 atgactccct caaagctaaa taacgctccc gcacactata agtacttgcg cactaagttt 120 caaattcaaa catgtgggat ccactattaa acgaattccc tgatacggtt cacgggtttc 180 ggtgtatgct ttctgtgaaa tatttgcaac ttttgtcgca ggattattca ccggatacgc 240 ttgggtacga gttaatacgg gatttaattt gtattttacg ctcccgtagt tatgtcgaag 300 cgagctgccg atatcgtcat ttctacgccc gcgtcgaaag tacgccggcg tctgaacttc 360 ggcagcccat acaccagccg tgctgctgcc cccattgtcc gcgtcacaaa acaacaggca 420 tggacaaaca ggcctatgaa caggaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt 540 cagcatatag gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat 600 agagttggta agagattttg tgtcaagtct gtttatgtgt tgggtaagat atggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtacggcga ctgtgaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacagg ctttggtcaa gaagtttgtc 900 agagttaaca attatgttgt ttacaatcaa caggaagcag gaaaatacga gaatcatacg 960 gaaaatgcgt taatgcttta tatggcttgt actcacgcta gcaaccctgt ttatgctacg 1020 ttgaagatta ggatatattt ttatgactct gtaacgaatt gatattaata aagtttaaat 1080 tttatttctg aatattgatc tacatacata gtttgttgga ttacattgta caatacatgt 1140 tctacagctt taataactaa attaattgaa attacaccga gattgttcag atatttgagg 1200 acttggtttt tgaataccct taagaaaaga ccagtctgag gctgtaaggt cgtccagatt 1260 cggaaggtta gaaaacactt gtgcagtccc agagctttcc gcgtgttgta gttgaactgg 1320 atcctgatcg tgagtatgtc catattcgtc gtgaatggac ggttgacgtg gctgatgatc 1380 ttgaaataaa ggggatttgg aacctcccag atatatgcgc cattccctgc ttgagctgca 1440 gtgatgggtt cccctgtgcg tgaatccatg gttgtggcag ttgattgaca gataataaga 1500 acacccgcat tcaagatcta ctctcctcct cctgttgcgc ctcttcgctt ccctgtgctg 1560 tactttgatt ggtacctgag tacatgggtc tatcaagtgt gatgaagatc gcattcttta 1620 aagcccaatt ttttagtgca gaattcttct cttcatccaa aaactcttta tagctagaat 1680 tgggtcctgg attgcagagg aagatggtgg gaattccgcc tttaatttga actggcttcc 1740 cgtattttgt atttgattgc cagtcctttt gggcccccat gaactcctta aagtgcttta 1800 ggtaatgtgg gttgacgtca tcaatgacgt taaaccaggc gtcattactg tatacccttg 1860 ggctcagatc tagatgtcca cacagataat tatgtggacc taatgatctg gcccacatcg 1920 tcttccccgt cctactgtca ccctcaatca ctacacttat tggtctattg gcccgcgcag 1980 cggcactgac gacgttctcg gcagcccaca cttcaagttc ttctggaact tgatcgaaag 2040 aagaagagga aaaaggagaa acataaggag ctggtggctc ctgaaagatt ctgtctagat 2100 ttgcatttaa attatgaaat tgcagtacaa aatccttagg agctagttcc ttaatgactc 2160 taagagcctc cgacttactt cccgcgttaa gtgctgcggc gtaagcgtca ttggctgtct 2220 gttgccctcc tcttgctgac cttccgtcga tctgaaattg cccccagtcg agaatgtccc 2280 cgtccttctc ggtgtaggat ttgacgtcgg agctggattt agctccctgt atgttcggat 2340 ggaaatgtgc tgacctgctt ggggagacca agtcgaagaa tcgcatattc tggcacttga 2400 aattcccttc gaactggatg agaacatgca agtgaggagt cccatcttcg tgaagctctc 2460 tgcagattct aatatatttt tttgaagttg gggtttgtat atttaataat tgggaaagtg 2520 cttcctcttt ggtgagagaa catttgggat aagtgatgaa atagtttttg gaataaatac 2580 cgttccgctt tggaggcatg ttgactaaaa ttgatcaccg attgaccgct cttgcaactc 2640 tccccggtat atcggtgatc aatatatagt gatcaccaaa tggcataatg gtaataaaaa 2700 aactttaatt tgaaattcaa accaaaaggc taaagcggcc atccgtttaa tatt 2754 //