ID AF354652; SV 1; linear; genomic RNA; STD; VRL; 2658 BP. XX AC AF354652; XX DT 28-APR-2001 (Rel. 67, Created) DT 28-APR-2001 (Rel. 67, Last updated, Version 1) XX DE Pea streak virus replicase (rdrP) gene, partial cds; and Tgb1 (tgb1), Tgb2 DE (tgb2), Tgb3 (tgb3), and coat protein (cp) genes, complete cds. XX KW . XX OS Pea streak virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus. XX RN [1] RP 1-2658 RA Cavileer T.D., Berger P.H.; RT "Molecular evidence establishing the relationship between pea streak virus RT and alfalfa latent virus"; RL Unpublished. XX RN [2] RP 1-2658 RA Cavileer T.D., Berger P.H.; RT ; RL Submitted (27-FEB-2001) to the INSDC. RL PSES, University of Idaho, AgSci, Rm. 242, Moscow, ID 83844-2339, USA XX DR MD5; 865f1097014283953102b67fe2ce950a. DR EuropePMC; PMC3689765; 23805334. DR EuropePMC; PMC4400424; 25883281. XX FH Key Location/Qualifiers FH FT source 1..2658 FT /organism="Pea streak virus" FT /host="Pisum sativum" FT /strain="ATCCPV-87" FT /mol_type="genomic RNA" FT /note="synonym: PeSV" FT /db_xref="taxon:157777" FT CDS <1..410 FT /codon_start=3 FT /gene="rdrP" FT /product="replicase" FT /note="contains GDD motif" FT /db_xref="GOA:Q91SI3" FT /db_xref="InterPro:IPR001788" FT /db_xref="UniProtKB/TrEMBL:Q91SI3" FT /protein_id="AAK40105.1" FT /translation="FAGDDMCASKHLKVSDKFEDFLSKLKLKAKVQFTKNPTFCGWSLL FT PFGIFKKPQLVYERICIAREKKNLHNCIDNYAIELSYAYKRGEQAVNAMNEEETDAFYN FT CVRVIIKRSHLLRSDVKTVFLNAKSLMESLH" FT CDS 442..1176 FT /codon_start=1 FT /gene="tgb1" FT /product="Tgb1" FT /note="membrane binding; contains ATP/GTP binding motif FT GAGKTS; associated with cell-to-cell movement" FT /db_xref="GOA:Q91SI2" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q91SI2" FT /protein_id="AAK40106.1" FT /translation="MDVFINNLLECGFRRNKIVFDLPIVVLAVPGAGKTSSIRRLLRQG FT SRFEAWTFGVADHHNCSGRFIKGISEESKPDPSKFILIDEFQRGDWEKLKPFAIFGDIA FT QLMLKSSAAFETVFSKCSSHRVPLPIVKLLQELDFEITSEREGVLEIRTLLGSEPEGVV FT TCFESEVCEFLDYNQINHKSPADIIGLEFPTVSLVISGKYAVGVHRAEFYICCTRATEK FT LLIITPEPEGFHNCSNAIDSTS" FT CDS 1154..1468 FT /codon_start=1 FT /gene="tgb2" FT /product="Tgb2" FT /note="membrane binding; associated with cell-to-cell FT movement" FT /db_xref="GOA:Q91SI1" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q91SI1" FT /protein_id="AAK40107.1" FT /translation="MPLIAPPDNSRSFLALAIGAGIAIIIFTLRSNQLPHVGDNIHSLP FT HGGFYKDGTKTIQYHSPARVSNNWFKGPNNIQALALVLLIIGLIHASSLRTSKGCNCHK FT " FT CDS 1450..1650 FT /codon_start=1 FT /gene="tgb3" FT /product="Tgb3" FT /note="membrane binding; associated with cell-to-cell FT movement; contains conserved TGES nucleic acid binding FT domain" FT /db_xref="GOA:Q91SI0" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q91SI0" FT /protein_id="AAK40108.1" FT /translation="MQLSQIIVGLISCCVVLLSLHVIEFYLKNTQNSCTIILTGESVKI FT LGCDFSSEFIEYAKTLKVQAI" FT CDS 1687..2571 FT /codon_start=1 FT /gene="cp" FT /product="coat protein" FT /note="capsid protein; contains conserved TGG motif" FT /db_xref="GOA:Q91SH9" FT /db_xref="InterPro:IPR000052" FT /db_xref="InterPro:IPR013569" FT /db_xref="UniProtKB/TrEMBL:Q91SH9" FT /protein_id="AAK40109.1" FT /translation="MAEQQKAAEEKARVEARLKQQLEQQSSKLGSEKEFIRDAEGLQKS FT LLERFQALQDLTAKSIAGSSIVNGGWEADRKRLKVSDKMKLDGSNIFTRPTLDDLQKLG FT WNPEANQVATAENLAKISAKLKELGVPPEHMARTFWDVAMYCTAVGASRYTNPQGSINY FT PEGSITRDAIFGVIREQCTLRQVCRSFAPIIWNYMHVNNMPPTNWAEKGFNNDVKFAAF FT DFFDFVECPASIQPADGLIRRPTSDEYIAFNTHKKNALARADRNSRYASNDASVTGGMF FT GCGAKENWRNNAC" XX SQ Sequence 2658 BP; 746 A; 506 C; 640 G; 766 T; 0 other; gtttcgcggg ggatgatatg tgtgcttcaa aacatttgaa agttagtgac aaatttgaag 60 atttcttatc caagttgaag ttgaaagcca aagtgcagtt cactaagaac cccacttttt 120 gtggttggtc tttgctgcca ttcggtattt tcaagaagcc tcaattggtg tatgaaagaa 180 tctgtattgc cagggagaag aagaacttgc ataattgcat tgataattat gccattgagt 240 tgtcttacgc ttacaagcgc ggggagcaag cagttaatgc tatgaatgag gaggaaactg 300 atgcttttta caattgtgta agggtcatta tcaaaagaag tcacttacta cggagcgatg 360 ttaagactgt gttcttgaac gccaaatctc tgatggaaag tttgcattaa gcttagatta 420 tcgctaatat agtttgatta gatggatgtg ttcataaaca atttgttaga gtgtggtttt 480 aggagaaata aaattgtgtt tgatttgccc atagtagttt tagctgttcc cggcgctggt 540 aaaacttcaa gtattaggcg tttgttgcgt cagggttcaa ggtttgaggc ctggactttt 600 ggggtagcgg accatcataa ctgttctggc cgttttatca aaggaatctc tgaggaatcc 660 aaacctgatc ctagcaagtt tattctgata gacgaattcc agagaggtga ttgggaaaag 720 ctcaaacctt ttgccatttt tggcgacatc gctcagttaa tgctaaagag ttctgctgct 780 tttgagaccg tattctcgaa gtgttcttcc catcgagtcc ctctacccat cgtcaaactc 840 ttgcaagagc tggatttcga gatcacgagt gagcgtgagg gcgtactaga aatcaggacc 900 ctgctcggat ctgaaccaga gggtgttgtg acctgtttcg aatctgaagt ctgcgagttc 960 ctcgattaca atcagatcaa ccataagagt cccgcggaca ttattggtct ggaattccca 1020 accgtctctc tagtcatatc tggcaagtac gctgtagggg ttcacagagc tgaattttac 1080 atctgctgta ctagggctac agagaaactc ttaattataa caccggagcc agaggggttt 1140 cacaattgtt caaatgccat tgatagcacc tcctgataat tcaagatcat tccttgcttt 1200 ggcaattgga gcgggcattg cgattattat attcactctg aggtccaacc aattgcctca 1260 cgttggagac aatattcact cattgccgca cggaggtttt tataaggacg gaacaaaaac 1320 catacagtac cactcccccg cgagagtctc gaacaattgg ttcaagggcc caaacaacat 1380 acaggcttta gctttggttc tgctgatcat tggtctgatt cacgcctcat ccttaagaac 1440 aagcaaggga tgcaactgtc acaaataatt gttggtttga tttcctgctg tgtagtacta 1500 cttagtttgc atgttattga attttatctt aaaaataccc aaaatagttg taccattatc 1560 cttactggtg agagtgtcaa aatacttggt tgtgatttct cgagtgaatt cattgaatac 1620 gcaaaaacct tgaaagtgca agctatttga gaatctttaa gtttgcagaa gaagaatttg 1680 ataaagatgg cggagcaaca gaaagctgct gaagagaagg ctcgtgttga ggctaggttg 1740 aaacaacagc ttgagcagca aagttcgaag ctggggagcg agaaagagtt tattcgggat 1800 gctgaggggt tgcagaaatc tctattggag cgttttcagg ccctgcagga cctaactgca 1860 aagagtattg caggctcatc catagttaat ggaggttggg aggcggacag aaaaaggttg 1920 aaggtgtctg acaaaatgaa gcttgatggt tcaaacatct ttacccgacc cacgctcgat 1980 gatcttcaaa agctgggttg gaaccctgaa gccaatcaag tggcaactgc tgaaaatctg 2040 gcaaaaataa gtgccaaact gaaagagctg ggcgttccac cggagcatat ggccaggaca 2100 ttctgggatg tggccatgta ctgcacggca gtcggtgcgt ccaggtatac taatccccaa 2160 ggttctatca attaccctga aggttccatc actagagatg caatctttgg tgtcataagg 2220 gaacagtgta ccctgaggca agtttgcagg agttttgctc ctatcatttg gaactatatg 2280 catgtaaata acatgccccc aactaattgg gcggagaagg gtttcaacaa tgatgtcaaa 2340 tttgctgcat tcgatttctt tgatttcgtg gagtgtcctg cttctattca gcccgcggac 2400 ggtttgatca gacgacctac atcggatgag tacatcgcct tcaacactca taagaagaat 2460 gctctggcta gagctgacag aaatagccga tacgcgagta atgatgcgtc tgttaccggt 2520 ggtatgttcg gttgtggagc caaggaaaat tggcgtaata atgcgtgcta agtgtgtgcg 2580 gttgctagta aaacctaaat aatgtataag ctagaaccta taaaatcaag tgtgttttaa 2640 tatattttta atgcttgt 2658 //