Dbfetch
ID AF345524; SV 1; linear; genomic DNA; STD; VRL; 3193 BP. XX AC AF345524; XX DT 22-FEB-2001 (Rel. 66, Created) DT 31-OCT-2009 (Rel. 102, Last updated, Version 3) XX DE Torque teno virus 11 isolate TCHN-D1 Orf2 and Orf1 genes, complete cds. XX KW . XX OS Torque teno virus 11 OC Viruses; Anelloviridae; Alphatorquevirus. XX RN [1] RP 1-3193 RX DOI; 10.1002/jmv.2200. RX PUBMED; 11920826. RA Luo K., He H., Liu Z., Liu D., Xiao H., Jiang X., Liang W., Zhang L.; RT "Novel variants related to TT virus distributed widely in China"; RL J. Med. Virol. 67(1):118-126(2002). XX RN [2] RP 1-3193 RA Luo K.-X., He H.-T., Liu D.-X., Liu Z.-H., Xao H., Jiang X.-J., RA Liang W.-F., Zhang L.; RT ; RL Submitted (30-JAN-2001) to the INSDC. RL Infectious Disease, Nanfang Hospital, Tonghe, Guangzhou, Guangdong 510515, RL China XX DR MD5; beae7d7e7d6aa38e4a8b4b57af94f5c0. DR EuropePMC; PMC434092; 15220423. XX FH Key Location/Qualifiers FH FT source 1..3193 FT /organism="Torque teno virus 11" FT /isolate="TCHN-D1" FT /mol_type="genomic DNA" FT /db_xref="taxon:687350" FT CDS 136..600 FT /codon_start=1 FT /product="Orf2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:Q99AR0" FT /protein_id="AAK11703.1" FT /translation="MGKCLKKNMFLGKIYRQKRALSLHSVRASKKKPPTAMSHWSRPVH FT HATGIEHLWYQSVINSHSACCGCGDPVRHFTNLAERYGFAPTPRAPPVAPTPTIRRARP FT LPVAPEPRALPWHGDGGEERGTGGGDGASPEADFADDGLDDLVAALDEER" FT CDS 480..2708 FT /codon_start=1 FT /product="Orf1" FT /db_xref="GOA:Q99AQ9" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/TrEMBL:Q99AQ9" FT /protein_id="AAK11702.1" FT /translation="MAWGWWRRKRHWWWRRRFARSRLRRRRIRRPRRRTRRRTVRRRRQ FT WRRGRPRRRLFKRKRRFWRRRRKAKIKITQWQPSRVKRCFMIGYFPAIICGQGRWSENF FT TSHIEDKTPKGPFGGGHSTARLSLKVLYEENQKHHNFWTASNKELELARFFGSTWTLYR FT HEEVDYICTFNRKSPLGGNLLTGPSLHPGAAMLSKHKILVPSFKTRPGGKPTVKFRIKP FT PTTLIDKWYFQKDICDTTLLNINFVACDLRFPFCSPQTDNVCVTFQVLSAVYNDFLSIT FT NSKLQATNWTDEYTNFLNKAFPSDRSINKLNTFSTEGAFSHPKVEKFKPKIPLPDGEYF FT QEKDALWGDPIHITTSQTRQAIIQKIVKNATNYLKKYTDEFKQFPNIAQFHHGFFTQWT FT GIYSAAFLNYHRISPEVPGLYVDTIYNPLTDKGIGNHIWIDYLSKADPNLDPVKSKCHI FT ADLPLWMATFGLVDWCKKETGNWGIPAWARVLLICPYTFPPMYDQKNPNRGFIPIGYNF FT SQGLMPDGSKYIPMQMRAKWYPNLLNQQAVLEDISQSGPFAFREKKPSASITAKYKFRW FT HFGGNPVSEQVIADPCQQPTFEMPGTGSLPRRLQVTDPKLLGPHYTFHSWDWRRDYFNR FT KTLKRMSEQQETSEFLFPGPKKPRVDLGVVQAVEKVSFQAEREQKPWEDSDQPSETEAL FT SEEEEEGSIHQQLRQQLQQQKQLRRGINCLFEQLVKTQQGVHLDPSLL" XX SQ Sequence 3193 BP; 975 A; 842 C; 748 G; 628 T; 0 other; gaatggctga gttttccacg cccgtccgca gcggcagcac cacggagggt gatccccgcg 60 tcccgagggc gggtgccgga ggtgagttta cacaccggag tcaaggggca attcgggctc 120 gggactggcc gggctatggg caagtgtctt aaaaagaaca tgtttctcgg taaaatttac 180 aggcagaaaa gggcactgtc actgcacagc gtgcgagctt caaagaagaa accacctact 240 gcgatgagcc actggtccag gcccgtccac catgcaacgg ggatcgaaca cctctggtat 300 cagtctgtta ttaacagcca ttctgcttgc tgcggctgtg gcgatcctgt acgccacttt 360 actaatcttg ctgagaggta tggctttgcc ccaactcccc gggccccgcc agtagccccc 420 acacccacca tccgtagagc caggcccttg cctgtggctc cggagccccg cgccctgcca 480 tggcatgggg atggtggaga agaaagaggc actggtggtg gagacggcgc ttcgcccgaa 540 gcagacttcg cagacgacgg attagacgac ctcgtcgccg cactcgacga agaacggtaa 600 ggaggcgcag acaatggagg agggggcgac ccagacggag actgtttaag agaaagagac 660 gcttttggcg acgcagacga aaagctaaga taaagataac ccagtggcag cccagtagag 720 taaagagatg ctttatgata gggtacttcc cagcaataat atgcggacag gggagatggt 780 cagagaactt taccagccac atagaggaca aaacccctaa gggacccttt ggagggggac 840 acagtacagc taggctctct ttaaaagtgc tatacgaaga gaaccagaag caccacaact 900 tctggacagc cagcaacaaa gagctagagc tggccaggtt ctttggcagc acctggacac 960 tgtacagaca cgaggaggta gactacatat gcacctttaa cagaaaaagc cccctggggg 1020 gcaaccttct tacaggaccc agtctacacc cgggagccgc catgctatca aaacataaga 1080 tactggtacc cagttttaag accagacctg gtggaaaacc cactgtaaaa tttaggataa 1140 aacctccaac aacactaata gacaaatggt actttcaaaa agatatttgt gacactacac 1200 tgctcaacat taactttgtt gcatgtgact tgcggtttcc gttctgctca ccacaaactg 1260 acaacgtttg tgtaacattt caagttcttt ccgcggttta taacgacttc ctctctataa 1320 ccaacagcaa gttacaggca acaaattgga cggatgaata cactaacttc ttaaacaaag 1380 cattcccctc tgacagaagc attaataaat taaacacatt cagtacagaa ggagcattta 1440 gtcacccaaa agtagaaaag tttaaaccaa agattcccct tccagacggc gaatactttc 1500 aggaaaaaga tgccctatgg ggagacccaa tacacattac aacatcacaa actagacagg 1560 ctataataca aaaaattgtt aaaaatgcaa caaactatct aaaaaaatac acagacgaat 1620 ttaaacaatt tccaaacatt gcccagtttc accacggatt ttttacacag tggacaggca 1680 tatacagtgc tgctttttta aactaccata gaatatctcc agaagtacca ggtctatatg 1740 tagacaccat ctacaaccca ctaacagaca aaggcatagg aaaccacata tggatagact 1800 acctcagcaa ggcagacccc aatctagacc cggtaaagag caaatgccac atagcagacc 1860 tgccactatg gatggcaaca tttggcctag tagactggtg caaaaaagaa acaggcaact 1920 ggggaatacc tgcatgggct agagtactgc taatatgccc atacactttc ccacctatgt 1980 atgaccagaa gaatcccaat aggggattca tacccatagg ttacaacttc tcacaaggac 2040 taatgccaga cggcagcaaa tacattccta tgcaaatgag agctaaatgg taccctaacc 2100 tgttaaacca acaggcagta cttgaagaca taagtcaatc aggacccttt gcatttagag 2160 aaaaaaaacc tagcgccagc ataacagcaa agtacaaatt tagatggcac tttgggggca 2220 accctgtatc tgaacaggtt attgcagacc cctgccaaca accaaccttt gaaatgcccg 2280 gaaccggttc gctgcctcgc agactacaag tcacggaccc gaaactcctc gggccacact 2340 acacattcca cagctgggac tggagacgtg actactttaa cagaaagact cttaaaagaa 2400 tgtcagaaca acaagaaact tctgagtttt tattcccagg cccaaaaaaa ccccgagtgg 2460 atctcggggt cgtccaagct gtcgaaaaag tctctttcca agcagaaaga gaacaaaaac 2520 cgtgggagga cagcgaccag ccgtcagaga cagaagccct ctcggaggaa gaagaagagg 2580 gctcgataca ccagcagctc cggcagcaac tgcagcagca aaagcagctc aggagaggaa 2640 tcaactgcct cttcgagcag ctagtgaaaa cccagcaggg ggtccaccta gatccttccc 2700 tcttgtaggc cccagacagt ggctgtttcc agaaagaaag ccagccccgg ctccgagcag 2760 cggagactgg gccacagagt acctagcagc tagagtgttt gatagacccc cgaggagcaa 2820 ccttaaagat acaccctact acccctacgt aaaaaaccag tacaatgtat actttgacct 2880 aacctttgaa taaagtgcaa cctcaaactt gcaaggccgt gggagtttca ctggtcggtg 2940 tctacctcta aaggtcacca agcactccga gcgttagcga ggagtgcgac ccttccccct 3000 gactcaactt cttcggagcc gcgcgctacg ccttcggctg cgcgcggcac ctcagacccc 3060 cgctcgtgct gacacgctcg cgcgtgtcag accacttcgg gctcgcgggg gtcgggaatt 3120 ttgttaaaca gactccgagt tgccattgga cactggagct gtgaatcagt aacgaaagtg 3180 agtggggcca gac 3193 //