ID AF337175; SV 1; linear; genomic RNA; STD; VRL; 5133 BP. XX AC AF337175; XX DT 22-FEB-2001 (Rel. 66, Created) DT 04-DEC-2003 (Rel. 78, Last updated, Version 2) XX DE Gremmeniella abietina RNA virus L1 putative coat protein and putative RNA DE dependent RNA polymerase genes, complete cds. XX KW . XX OS Gremmeniella abietina RNA virus L1 OC Viruses; Riboviria; Totiviridae; Victorivirus. XX RN [1] RP 1-5133 RX DOI; 10.1007/s00705-003-0194-6. RX PUBMED; 14648287. RA Tuomivirta T.T., Hantula J.; RT "Two unrelated double-stranded RNA molecule patterns in Gremmeniella RT abietina type A code for putative viruses of the families Totiviridae and RT Partitiviridae"; RL Arch. Virol. 148(12):2293-2305(2003). XX RN [2] RP 1-5133 RA Tuomivirta T.T., Hantula J.I.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Finnish Forest Research Institute, Vantaa Research Centre, Jokiniemenkuja RL 1, P.O.B. 18, Vantaa 01301, Finland XX DR MD5; 16edf4273fab34b31766fd48acd96c02. DR EuropePMC; PMC3393542; 22496220. DR EuropePMC; PMC3597494; 23516364. DR EuropePMC; PMC3659425; 20976609. XX FH Key Location/Qualifiers FH FT source 1..5133 FT /organism="Gremmeniella abietina RNA virus L1" FT /host="Gremmeniella abietina" FT /serotype="type A, HR2" FT /mol_type="genomic RNA" FT /db_xref="taxon:152217" FT CDS 276..2606 FT /codon_start=1 FT /product="putative coat protein" FT /db_xref="GOA:Q99AT4" FT /db_xref="InterPro:IPR008871" FT /db_xref="UniProtKB/TrEMBL:Q99AT4" FT /protein_id="AAK11655.1" FT /translation="MANAYETNFQTANASPLTGTLADPVGGTIQADHYRRYRAGVFMSV FT PDMGHVSNVGRSIFYEVGRHHGRARDLLAAPHAEAIPIDCSVDINAAEAANFEGMARRF FT SNFSPQWVKMDLAGMVERLAKGVTAAGVFGGIDTGTLRGGQAIRVTALGTLDSPQTASI FT NSVFIPRTVDTVGNDHVFAVLVSAANGEGAAVTTDVVRLDANTNQPMIPAVAGASFATA FT CVEALRILGANMEASGAGDVFAYAVTRGVHAGVSVVAHTDEGGWFRNVLRHDRFRVPYG FT GINQGLRQYPALPALASTSPSSIAAWADAIALKTAAAVAHCDPLVPGEGGWYPSVFTAG FT QNGTSAPGSSESAEVGDQEARSIGRQIASDIGRFAPAYCRALGTLFGLHTSSGVAESHL FT STVAMRALTQDVNTDRHLRHETVAPYFWIEPTSLIAVNAFGTPAEAEGYGSKVTPGDTR FT SEPCFERFRLLQKGSTANHMTVAFKMRTARTSALVSAYAAAPAPLADLKLYQFDESSVV FT LPGDQLPTQGDVAHKHAAADPLSSYLWKRGQSCFPAPAEFINTNSNYGAKVRLVTWDDD FT FNASLSDLPNDEEMATGVVTFRVTVPTGLASAGSNAENREAKRARTRGAIALAQAVLRA FT RATGLAVSPSMEISDVPPTFDTPPLLPAPTYSDTQSASGPRDPGPVPVLAVGGGLDVGR FT VARGAPLPPTAHHMPQRAPRIAGAVVPPGGPVAGPPAATGGPAAPNVPPPPPAGPLDSQ FT DPLPAPPAHLPAEATAAEAVPAQ" FT CDS 2603..5080 FT /codon_start=1 FT /product="putative RNA dependent RNA polymerase" FT /function="dsRNA replication" FT /db_xref="GOA:Q99AT3" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:Q99AT3" FT /protein_id="AAK11656.1" FT /translation="MIESPVSVRANEAGIVGQYLKGLLNMEWASGVMVLSFSQQISEVY FT KPTFNGLRPTDLQRAAAAYLVPDFPVQVRIERGSVLSLLSQVIDPPARVTDRCSFRWLC FT DPKASYAAFPPKQHPGAMNKVNVYLNEVASSLLSLDPAAYSSASQALWPHKGKIANDQA FT SAIILYGYGLRAQAVPDAMHVAATLATTPDLAKALTNFLKATGANGSRLGALLCESNVL FT LGRAAGPADLSEEARYRTSSDVESHLAIFSDADLGAAIDAILDEEIKRVEGSQHIEFDS FT YQEHWNDRWAWAVNGAHSGHVSRLYPRVPKPPGMLREHRRAWLESVTEDPRTDWDGKTF FT VSASPKLEAGKTRAIFACDTVNYLAFEHLLAPVEKRWRNSKVILDPGRGGHLGMIFRTT FT AARARAGVSMMLDYDDFNSHHSTRAMQMLFQRLGDRVGYPADKLAKLVASFEKMYIYNG FT MEQVGRVKGTLMSGHRGTTFINSVLNKAYLLIVLGEDLFERSVALHVGDDVYFGVRTYA FT EAGEVVTRIKNSPLRMNRMKQSVGHVSTEFLRNATSGRSTYGYFARAVASTVSGNWVNE FT MALSPSEALSSIIGAARTLVNRSGAVNLPLLLHPSLVRMTGLPREDHKKLRELLLGTTA FT LDNGPQYSLGGYYTSVSSLITTTASDRHGYTPLPREATTAYLSCAADPLEVNVLTQAGV FT SVVSAMEEASFRKSLPARYTGYETLRLGPKSLIRSIGTASVVDLISASPPRGVLERYPL FT LTLAKRRLPEYLVRWAVSIAGGNPSAPDIGMEAWGEFKHGCMIATPMSYSDAATFGKRT FT VSTVLTCPLDAHV" XX SQ Sequence 5133 BP; 1058 A; 1547 C; 1372 G; 1155 T; 1 other; gcagtgataa gacgccagtc gataccgaaa ggttcccgct tgcgtgcgtt ccctactact 60 gggagtgcgg gattccgagt gtccttttat ctattactcg tgttgtgaga tatggcgaaa 120 gccccctatc tcgctgtgtg ccccatggtc ccctggaccg cgcaaccgtg acctgaaaag 180 actcttggta gcatcgggct ttgttatagt ggttgggcga gggttccgaa gacccctaaa 240 ctacaacaat tgcacactta cacaacttct caactatggc caacgcctac gagaccaatt 300 tccagactgc caatgctagc ccacttactg ggaccctagc tgacccggtc ggtggcacta 360 tccaagccga ccactaccgc cgctatcgcg ccggtgtctt catgtccgtc ccggatatgg 420 gccatgtgag caacgtggga cgcagcatct tctatgaagt tgggcgtcat cacggccgtg 480 ctcgcgacct cctagccgcg cctcacgcgg aagccattcc tatcgactgc agtgtcgata 540 tcaatgctgc tgaagcagca aattttgaag ggatggctcg ccgtttctcg aattttagcc 600 ctcagtgggt taaaatggac ttggctggca tggtcgaacg ccttgctaag ggtgttactg 660 ccgccggtgt tttcggtggt atcgacactg gcactctacg gggtggccag gcaatccggg 720 ttaccgcact cggtaccctg gattcgcccc agacggcgtc tatcaacagt gtcttcatcc 780 cccgcactgt tgacaccgtc ggcaacgacc acgtttttgc cgtccttgta tccgccgcaa 840 acggggaagg ggctgctgtc actaccgacg tggtccggct ggatgccaac actaaccagc 900 ctatgatccc agcagtggca ggcgcctcct ttgccactgc ttgtgttgaa gccctccgta 960 tcctcggggc taacatggag gcatcaggcg caggcgatgt cttcgcttac gctgtaactc 1020 gcggcgtcca cgccggtgtg tcagtggtcg cccatactga cgaaggcggc tggttccgca 1080 atgtcttaag acatgaccgt ttccgcgtcc cgtatggcgg cataaaccaa gggctgcgtc 1140 agtaccccgc cctcccggcc ttggcatcga cttcaccttc gtcgatagca gcatgggcag 1200 acgctatcgc cctgaagacc gccgctgctg tcgcccactg tgaccctctc gttcctggtg 1260 aaggtggatg gtatccgtca gtcttcacgg ctggacaaaa cggaacttct gctcccgggt 1320 ctagtgagag cgctgaagtc ggagaccagg aagcccgttc gatcggtagg cagattgcct 1380 ctgatatcgg gcgtttcgcg cctgcgtact gccgtgcgct gggtacactc ttcgggctgc 1440 acacatcaag cggtgtcgca gaaagccacc tttcaacggt cgctatgcgt gctctgaccc 1500 aggacgtgaa cacagaccgt catctgcgac acgaaaccgt cgccccctac ttctggattg 1560 agcccacttc gctcatagct gtcaacgcgt ttggtacccc tgccgaagca gaggggtacg 1620 gatcaaaagt cactccgggc gatacacgaa gtgaaccatg cttcgaacgt ttcaggctgt 1680 tgcagaaagg ttctactgcc aaccacatga cagtagcgtt caagatgcgt acggcccgga 1740 cttcggctct ggtcagcgcg tacgctgcag cacctgctcc cctagcagac ctcaagctgt 1800 accagttcga tgagtcttct gtwgtgttgc ccggcgacca gctacccact cagggtgacg 1860 tagctcacaa acacgccgct gccgacccac tctcttcata cctatggaag agaggccagt 1920 cgtgtttccc tgcgcccgcg gagttcatta atacgaactc taattacggc gctaaagtta 1980 ggttagttac gtgggacgat gatttcaacg cttccctgtc tgacctccct aacgatgagg 2040 agatggcgac tggtgttgtc acgttccgcg tgacagtccc gaccggcctc gcgagtgctg 2100 gtagcaacgc tgaaaaccgc gaggctaaac gtgcgcgtac gcgtggagct atcgctctag 2160 cccaggcagt cttgcgtgcc agggccactg ggctggctgt ttctccttca atggagatca 2220 gtgacgtgcc gcctacgttc gacacgcccc ccctactccc ggctccaacg tatagcgaca 2280 cccagtctgc ttccggaccg cgtgaccctg ggccggtgcc agtactcgct gttggtggtg 2340 gcctggacgt cggtagagta gcgcgtggtg cgcctttacc ccctacagcg catcacatgc 2400 cgcaacgcgc gcccaggatt gccggtgcgg tcgtaccacc cggtggacct gtcgctggcc 2460 ctccagccgc taccggcggc cctgcagctc ccaacgtccc cccgccccct cctgctggtc 2520 ccctcgattc tcaggaccct ctccctgccc ctcccgccca cctgccagcc gaagctactg 2580 ctgctgaagc agtgcccgct caatgattga gtcccccgtg tccgtacgag ctaatgaagc 2640 cggcatcgta ggacaatacc tgaaagggct tctcaacatg gagtgggcgt ctggcgttat 2700 ggtgttatct ttttcccagc agatctcgga ggtctacaaa ccaacattca acggtttgag 2760 gccgacagac ttacaaagag cggctgctgc gtaccttgtt cccgattttc ctgtgcaggt 2820 ccgcatcgag cgtggatctg tactctcttt actatctcaa gtcatcgacc ccccggctag 2880 agtgaccgac cgctgttcgt tccggtggtt gtgtgatcca aaggcgtcct atgctgcgtt 2940 cccaccaaag caacatccgg gcgctatgaa taaagtgaac gtatacctca acgaggtggc 3000 atcctctctc ctctccctgg atccagccgc ctactcttct gctagccaag ccctctggcc 3060 acacaaaggg aagatagcca acgaccaagc aagtgccatt attctatacg gctacggtct 3120 gcgtgcacag gccgtacctg acgccatgca tgtggctgct acgctcgcga ccacccccga 3180 cctggcgaag gccctcacta acttcctcaa agcaacaggc gccaacggtt cgcgtctggg 3240 tgctctcctg tgcgagagca atgtccttct aggccgagcc gctgggcctg ctgacctctc 3300 tgaggaggct cggtatcgta cgagtagcga tgtcgagagt cacctggcta tctttagtga 3360 tgctgactta ggtgcagcta tcgacgccat cttggacgag gagatcaaac gagttgaagg 3420 ctcacagcac attgagtttg actcatacca agagcattgg aatgatcggt gggcttgggc 3480 agtcaacgga gcccattcag gccacgtctc aaggttgtac ccccgtgtcc caaagccacc 3540 aggtatgctc cgcgaacaca gacgcgcctg gctcgaaagt gtgactgaag atcctcgcac 3600 cgactgggac ggcaagacat tcgtgtccgc atccccgaag ctggaagccg ggaagactcg 3660 agcaatcttt gcttgtgata ccgtaaatta ccttgctttc gagcacttgc tcgcaccggt 3720 agagaaacgt tggcggaatt ctaaagtgat tctagatccc ggacgtggcg gtcatctcgg 3780 catgattttc cgcactacgg ccgctcgcgc ccgtgccggt gtctccatga tgttggatta 3840 cgacgatttc aattcgcacc attctacacg agcaatgcag atgctgttcc aacgtttagg 3900 agaccgcgtt ggttacccag ctgacaaact ggctaaactt gtcgcttcat tcgagaagat 3960 gtatatatac aatggaatgg agcaagttgg tcgtgtgaag ggtacactga tgagtggcca 4020 tcgaggcacg actttcatca attccgtctt gaacaaggcg tatctcctta tcgtattagg 4080 agaagatttg ttcgagcgca gcgtggcctt gcacgtgggt gatgatgtat acttcggcgt 4140 acgtacgtac gctgaagcgg gcgaggtcgt cacccggatt aagaactcgc ccttgcgtat 4200 gaaccgaatg aagcaatcgg taggtcatgt atctactgag ttcttacgta acgccacctc 4260 aggccggtct acctacggat atttcgctcg tgctgttgcc agcaccgtat ccggaaactg 4320 ggtgaatgag atggctctca gtccaagcga ggcgctcagc tctataatcg gggctgcgcg 4380 cacactcgtg aaccgatccg gcgcagtaaa cttgccactg ctcctccacc caagtcttgt 4440 tcgcatgacg ggtttaccaa gggaggacca caagaagctg cgcgaattgc tgttggggac 4500 aacagctttg gataatggcc cccaatacag cctggggggc tactacacat ccgtcagcag 4560 cctaatcact actaccgcta gtgaccgtca cggctacact ccactccccc gtgaggcaac 4620 aacagcatat ttaagttgtg ccgcggaccc gctcgaagtg aacgtgttga cccaagctgg 4680 tgtcagcgtt gtcagcgcaa tggaagaggc gagtttcagg aagtcgcttc cagctcgcta 4740 tactggctac gagacattac ggctaggccc taagtcattg atcaggtcta taggcacagc 4800 atccgttgtt gacctcatct ccgcttcccc tccccgcgga gttctagaac gctaccctct 4860 cctcaccctg gcaaaaagga gactcccaga gtacttagta cgctgggcag tttctatcgc 4920 cggtggcaac ccttctgctc ccgatatcgg catggaggcc tggggagagt ttaaacacgg 4980 ctgcatgatt gcgactccga tgtcgtattc agatgcagcc acctttggca agcgaacagt 5040 ttcgactgta ttaacttgcc cacttgacgc ccacgtgtaa gccaccccag cttacggtgt 5100 caagaaattc gaggccccaa ggggccaaat tgc 5133 //