ID AF326766; SV 2; linear; genomic RNA; STD; VRL; 7351 BP. XX AC AF326766; XX DT 04-FEB-2002 (Rel. 70, Created) DT 09-JAN-2022 (Rel. 144, Last updated, Version 9) XX DE Enterovirus J1 strain 1631 isolate Simian enterovirus SV6, complete genome. XX KW . XX OS enterovirus J1 OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; OC Picornavirales; Picornaviridae; Enterovirus; Enterovirus J. XX RN [1] RP 1-7351 RX PUBMED; 11773400. RA Oberste M.S., Maher K., Pallansch M.A.; RT "Molecular phylogeny and proposed classification of the simian RT picornaviruses"; RL J. Virol. 76(3):1244-1251(2002). XX RN [2] RP 1-7351 RX PUBMED; 18024906. RA Oberste M.S., Maher K., Pallansch M.A.; RT "Complete genome sequences for nine simian enteroviruses"; RL J. Gen. Virol. 88(PT 12):3360-3372(2007). XX RN [3] RP 1-7351 RA Oberste M.S., Maher K., Pallansch M.A.; RT ; RL Submitted (06-DEC-2000) to the INSDC. RL Respiratory and Enteric Virus Branch, Centers for Disease Control and RL Prevention, 1600 Clifton Rd NE, Mailstop G-17, Atlanta, GA 30333, USA XX RN [4] RC Sequence update by submitter RP 1-7351 RA Oberste M.S., Maher K., Pallansch M.A.; RT ; RL Submitted (27-FEB-2007) to the INSDC. RL Respiratory and Enteric Virus Branch, Centers for Disease Control and RL Prevention, 1600 Clifton Rd. NE, Mailstop G-17, Atlanta, GA 30333, USA XX DR MD5; ed2e9efe89c2b6798a8913dfa8937051. DR EuropePMC; PMC135860; 11773400. DR EuropePMC; PMC5728361; 29211985. DR EuropePMC; PMC6443042; 30478287. DR RFAM; RF00048; Entero_CRE. DR RFAM; RF00229; IRES_Picorna. DR RFAM; RF00386; Entero_5_CRE. XX CC On Feb 19, 2008 this sequence version replaced AF326766.1. XX FH Key Location/Qualifiers FH FT source 1..7351 FT /organism="enterovirus J1" FT /strain="1631" FT /isolate="Simian enterovirus SV6" FT /mol_type="genomic RNA" FT /clone="SV6" FT /note="synonym: simian virus 6" FT /db_xref="taxon:2847791" FT 5'UTR 1..699 FT CDS 700..7245 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q8V5Z9" FT /db_xref="InterPro:IPR000081" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR002527" FT /db_xref="InterPro:IPR003138" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR014838" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="InterPro:IPR036203" FT /db_xref="UniProtKB/TrEMBL:Q8V5Z9" FT /protein_id="AAL69638.2" FT /translation="MGAQVSRQQTGSHETSNIATNGSTLHYTNINYYNDSYAASAAKQD FT FTQDPGKFTQPVADVLKQTAVPLKSPSAEACGYSDRVAQLKLGNTSITTQEAANITVGY FT GEWPTFLSNVDANAVDAPTHPDVSVNRFYTLKAVXWEKTSTGWYWKLPDCLNQLGVFGQ FT NAQYHYLYRSGFAVHVQCNASKFHQGALLVVAIPEWTQGRGLTSSTNTYMEYSQTNPGK FT NGGTFNHPYLLDNGTAVSMALIYPHQWINLRTNNCATIVLPYVNNVPSDCALKHNNWTL FT AVIPISPLNYDAGATPLVPITITIAPMACEFSGLRKAISQGLPAQLTPGSTQFVTTDND FT SSQPLIPNFDETTPIHIPGEVRNMLEICQVESILEVNNVTGVNGMSRLLIPISVQSDLD FT QQIASFRVDPGADGPWQSTLLGNICRYYNQWSGSLEITFMFTGSFMATGKILIGYSPPG FT GSQPATREDAMLGTYVVWDFGLQSSVTLAIPWISNVMFRNLQSIAGQPYFYAGIVTMWY FT QTNFVVPDGAPTSADIIALGSAQSNFSLRLLKDSPDISQTAVLNGPNPVGQALDKMVTN FT KIEGLSNTSASDAVIETANTPALQAAETGATSNADDAGLIETRDVINTQRPTETTVQAF FT YARAGLVGMVDIIHSDSNSPKFASWTIDTMAFVQQRRKLEMFTYMRFAAEFTFVVSTES FT TTKIPNTMIQYMYVPPGAPIPTTSNGYEWQSGTNPSVIVRMNEAPARVRVPFISPAGAY FT AWFYDGYTDFGTHPSPNGKGDANYGLNPANQFGTFATRIIGNGAISAIRIRIYMKPTQV FT RCWIPRAIRTCPYIEKNRPSYNPNKTAIAKNRQSITTTGKFGQQSGAVYVGNYRIVNRH FT LANEFDAQSMVWESYERDLLVSTTTAHGCDVIARCNCNTGVYFCRSKGKHYPVCFQGPG FT LTWIEANEYYPARYQSHVLLAPGPAEPGDCGGILRCQHGVIGLVTAGGNGIVAFADLRD FT LLWLEDDAMEQGITDYVAQLGQAFGSGFTQEIADKTQQLKDMLIGQDSILEKCLKALIK FT IVSALVIIVRNHEDLITVTATLALIGCSGSPWQWLKTKVCQYLQIPVVEKQGDSWLKKF FT TEATNAAKGLEWIAQKISKFIDWLKTKIVPEVKEKVEFLGKLKQLPLLESQITSIEHSA FT PSQDDQERLFGNVQYLAHYCRRYAPLYAAEARRVFTLEKKMSNYMQFKTKSRIEPVCLL FT IHGTPGAGKSVASSLIGRAIAEKLNSCVYSLPPDPDHFDGYKQQAVVIMDDLCQNPDGK FT DVSLLCQMVSTVDFIPPMASLEEKGILYTSPFMIASTNHGSITAPTISDSRALNRRFYL FT DVDIAINDEYKVNNKVDMQRACQHCHNCDPANFKRCCPLICGRAIQFIDKRSGVRYTLD FT MLVTEMFREYTRRNSIGNVLEALFQGPPIYRDIKISVAPETPAPPAIADLLKSVDSEEV FT RQYCQEKGWIIPVTECQTERHLSRALTILQAVSTFVAVAGCIYIVYKLFAGFQGAYTGL FT PFNKPKVPTIRQAKVQGPSFEFAVAMMKRNSAIIKTGQGEFTMLGIWDKWAVVPRHAKP FT GDTVIVDDKELRVLDAKELVDAEGVNLELTMIKLDRNEKFRDIRGFIPKESGELSEAVL FT AINTSKFPNMFIPVGAVKEYGFLNLSGTPTHRMLMYNFPTKSGQCGGVLMATGKVIGIH FT VGGNGHQGFAATLLRDYFNEEQGEIEWMETNKESGYPIINAPTKTKLEPSVFHDIFPGV FT KEPAVLNKNDPRLKVDFEEAIFSKYVGNVNTHVDEYMQEAIDHYAGQLMTLDIDISEMC FT LEDAVYGTEGLEALDLTTSAGYPYVTMGIKKRDILSKKTRDLSKLKECMDKYGLNLPMV FT TYVKDELRSREKVEQGKSRLIEASSLNDSVAMRQCFGNLYKTFHRNPGTVTGSAVGCNP FT DTFWSKIPVMLDGELFAFDYTGYDASLSPVWFACLSRVLEKLGYDYKAGRYISYLCHSY FT HLYKNKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLLLKTYKNIDLDKFKMIAYGDDVI FT ASYPYPIDAGLLAKAGKEYGLTMTPADKSKEFNNVTWENVTFLKRYFRADEQYPFLVHP FT VMPMKEIHESIRWTKDAKNTQEHVRSLCELAWHNGQEVYEEFLSKIRSVPVGRCLLLPA FT YTTLRRKWLDQF" FT mat_peptide 700..906 FT /product="1A (VP4)" FT mat_peptide 907..1662 FT /product="1B (VP2)" FT mat_peptide 1663..2382 FT /product="1C (VP3)" FT mat_peptide 2383..3249 FT /product="1D (VP1)" FT mat_peptide 3250..3699 FT /product="2A" FT mat_peptide 3700..3996 FT /product="2B" FT mat_peptide 3997..4980 FT /product="2C" FT mat_peptide 4981..5241 FT /product="3A" FT mat_peptide 5242..5307 FT /product="3B (VPg)" FT mat_peptide 5308..5856 FT /product="3C" FT mat_peptide 5857..7242 FT /product="3D" FT 3'UTR 7246..7351 XX SQ Sequence 7351 BP; 2175 A; 1603 C; 1726 G; 1845 T; 2 other; ttaaaatagc ctcagggttg ttcccaccct gagggcccac gtggcgtagt actctggtat 60 caaggtacct ttgtacgcct attttatttc ccttccccca cagtaactta gaagcttatc 120 tcatagttca acagtagggt cactaaccaa gtggctcagc gaacaagcac ttctgtttcc 180 ccggtcctag tacctgtgaa gctgtaccca cggcggaagg ggaaaaagat cgttatccgg 240 ccccctactt cggaaagcct agtaacacca ttgaagcaat cgagtgttgc gctcagcaca 300 gtaacccctg tgtagctttg gttgatgagt ctgggcactc cccactggcg acagcggccc 360 aggctgcgtt ggcggccaac cgactcgggc aaccgggtcg gacgctcgtt tgtggacatg 420 gtgtgaagag cctactgagc tagagggtag tcctccggcc cctgaatgcg gataatccta 480 accccggagc acccacactc aatccagagt gcaggatgtc gtaacgcgta agtctgggac 540 ggaaccgact actttgggtg tccgtgtttc ctgttttact tactttggct gcttatggtg 600 acaatctagt gttgttacca tatagctatt ggattggcca tccggtgttt tgaattgtgt 660 gtttatacta attcttttac atatcacaga caaccaaata tgggagctca agtatcaaga 720 caacaaactg gctcacatga gacaagtaat attgcaacca atggtagtac actacattat 780 acaaacatca actactataa tgattcatat gcggctagtg cagcaaaaca ggatttcact 840 caagatcccg gcaagttcac acaacctgtc gcagatgttt taaagcaaac cgctgttcca 900 ttaaagtcac ccagtgctga agcttgcggt tatagtgaca gggtggcgca gctaaaactg 960 ggcaatacct ccataaccac tcaagaagct gcaaatatca ctgtaggata tggtgagtgg 1020 cctacttttc tcagtaacgt tgatgccaat gcagtagatg caccaacaca ccccgatgtg 1080 tcagtaaatc gcttttacac cttgaaagct gtaargtggg agaaaacctc cacaggatgg 1140 tattggaagt taccagactg tttgaatcaa cttggtgtgt ttggccaaaa tgctcaatat 1200 cactacctgt ataggtcagg gtttgccgta catgtgcagt gcaatgccag caagtttcac 1260 cagggggctt tattagtggt agctatacct gaatggaccc aaggacgcgg actaacgagc 1320 agcaccaaca cttacatgga gtactcacag accaaccctg gaaagaatgg tggcacgttc 1380 aatcaccctt atttattgga taacggtact gcagtatcaa tggcattgat atacccacac 1440 caatggataa atttaaggac caacaactgt gctaccatag tgctgccgta cgttaataac 1500 gtcccaagtg attgtgcctt gaagcacaat aattggacat tagctgtcat accaattagc 1560 ccattaaatt atgatgcagg ggccactcct cttgttccaa ttaccatcac catcgctccc 1620 atggcatgcg agttttcagg tctacgaaag gcaatctccc aagggttgcc agcccaactg 1680 accccaggtt ccactcagtt tgtaacaacg gacaatgaca gttcccagcc attaatccca 1740 aactttgatg agaccacacc aatccacata cctggagaag tgagaaacat gctggagata 1800 tgtcaggtgg agagcatcct tgaggtaaat aatgttactg gtgtaaatgg catgagcagg 1860 ttactaatac ccatcagcgt gcaaagtgat ctagatcagc aaatagctag tttcagagtt 1920 gatcctggcg ctgacgggcc ctggcaaagt acactactag ggaacatatg taggtattac 1980 aaccaatggt ctggtagcct agaaataaca ttcatgttca ctggatcctt catggcaaca 2040 ggaaagatac ttattggtta ctcaccaccc gggggatctc aacccgcaac tcgtgaagat 2100 gccatgttgg gcacgtatgt tgtttgggac tttggactcc aatcttcagt gactctggcg 2160 atcccatgga ttagtaacgt aatgtttaga aacctccaat ccattgctgg ccaaccatac 2220 ttctatgcag gaattgtgac catgtggtac cagacaaatt ttgtagtccc agacggggcc 2280 cccacaagtg ctgacatcat cgcactcggt agtgcccagt ccaacttcag ccttaggctg 2340 ttaaaagata gcccagatat ttcacaaact gcagtgctca atggcccaaa tccagtggga 2400 caggctctag ataagatggt gaccaataaa attgaaggct taagcaacac atcagcatct 2460 gatgcagtca ttgagactgc caacacacca gcattgcagg cagccgaaac aggagccacg 2520 tcaaacgcag atgatgcagg gctgatcgaa accagggatg tcattaacac acaacgccca 2580 actgaaacaa ctgtgcaggc gttctatgct agggctggtt tagttggaat ggtagatatc 2640 attcatagtg acagcaactc acccaagttt gcatcgtgga ccatcgacac gatggctttt 2700 gtccaacaac ggcgaaagct cgaaatgttc acgtacatga ggtttgctgc ggagttcacc 2760 tttgtagtgt caactgaatc cacaacaaag atacctaaca ctatgattca gtatatgtac 2820 gtaccaccag gagcaccaat acccacgact agcaatgggt acgaatggca atctggcacc 2880 aacccatcag ttattgtacg tatgaatgag gcaccagcta gagtgcgagt tcccttcatt 2940 agcccagcag gtgcatatgc ctggttttat gatggctaca ctgattttgg tactcatccc 3000 tcaccaaatg gtaaaggaga tgcaaattat ggattgaatc cagccaatca gtttggcact 3060 tttgcaaccc gcattattgg aaacggggca atctccgcga ttaggattag aatttacatg 3120 aaaccaacgc aagtgaggtg ctggatacca agagctataa gaacatgccc atacattgaa 3180 aagaacagac ctagttacaa cccaaacaag actgcaattg cgaaaaacag gcaaagcatc 3240 accaccacag gtaaatttgg acagcaaagt ggggcagtct atgtaggcaa ctacaggatt 3300 gtaaatagac acttggctaa tgagtttgac gcccagtcaa tggtgtggga gagttatgag 3360 agagatcttc tagtgtccac cactacagcc catggttgtg acgtaattgc ccgatgcaat 3420 tgtaacactg gtgtgtattt ctgccgtagc aagggaaaac actacccagt ctgctttcaa 3480 ggaccaggac tgacttggat tgaggccaac gaatattacc cggctagata tcagagccat 3540 gtccttcttg cccctggacc agctgaacca ggtgattgtg gagggatcct taggtgccaa 3600 cacggtgtga ttggactggt aaccgctggt ggaaatggca ttgttgcatt tgctgatttg 3660 agagacctat tatggctcga ggatgatgcc atggaacaag ggataactga ttatgtcgct 3720 cagcttggtc aagcttttgg cagcggattc acacaagaga ttgctgacaa gacacaacaa 3780 ctaaaagata tgttaattgg acaggattcc atcttggaga agtgcctgaa agcgttaatc 3840 aagattgtaa gtgctcttgt gattatagtt aggaatcatg aagatctcat cacagtaacg 3900 gccactctag ccctcattgg atgttctggg tcaccatggc aatggttaaa gaccaaagta 3960 tgccagtact tgcaaatacc agtagtggaa aaacaaggag attcatggct gaagaaattt 4020 acagaagcca caaacgctgc aaaaggccta gaatggattg cccaaaagat tagtaaattc 4080 attgattggt tgaaaaccaa aatagtgcct gaggtgaagg aaaaagtcga attccttgga 4140 aaactcaaac aactacccct actcgaaagt cagattacca gcattgagca tagtgcaccc 4200 agtcaggatg atcaagaaag actttttgga aatgttcaat acctggctca ctactgtagg 4260 aggtacgcac cgctgtatgc ggcagaagca agaagggtgt tcactttgga aaagaagatg 4320 agcaattaca tgcagttcaa gaccaaatcc cgcattgaac ctgtatgttt gctgatacac 4380 ggaacccccg gagcaggaaa gtcagtggcc tcaagcctca ttgggcgtgc catcgctgag 4440 aaattgaata gctgtgtgta ttctctacca ccagaccctg accactttga tggttacaaa 4500 cagcaagctg tcgtcatcat ggacgattta tgtcagaacc cagatgggaa agatgtgagc 4560 ttgctatgtc agatggtttc cacagtggat tttattccac ctatggctag cttagaggaa 4620 aagggaattc tatatacttc ccctttcatg attgcatcta ctaaccatgg ttccatcact 4680 gctccaacca tctcggatag tagagcactt aacaggaggt tttatctaga tgtagacatt 4740 gctatcaatg atgagtacaa agtgaacaac aaagtggaca tgcagcgcgc gtgtcagcac 4800 tgtcayaact gtgacccagc aaatttcaaa cgctgttgcc cccttatttg tggtagggct 4860 atccagttca ttgacaaaag atcaggagtg aggtacacac tagacatgct tgtcacagaa 4920 atgttcagag agtacacccg taggaacagc attggcaacg tacttgaggc cttgtttcaa 4980 ggacccccaa tttacagaga catcaaaatt tcagtagcgc ccgagacacc agcacccccg 5040 gcaatagcag acttgttgaa gtcagttgat tctgaggaag tgagacaata ctgtcaagag 5100 aagggttgga taataccagt cactgagtgt cagacagaaa gacacctcag tagagctttg 5160 actattctcc aagctgtttc aacatttgtg gctgtagctg ggtgtatcta catagtgtac 5220 aagctgtttg ctggatttca aggggcatac actggattgc ctttcaacaa acccaaagtt 5280 ccaaccataa ggcaggcaaa ggtacaagga ccttctttcg aatttgcagt ggcaatgatg 5340 aagaggaatt cagccattat taaaacagga caaggtgagt tcaccatgct cggtatctgg 5400 gacaagtggg cagtggtccc gcgccacgct aaacctggag acactgtgat tgtcgatgac 5460 aaggagctca gagttcttga tgccaaagag ctggtggatg ctgaaggggt gaatttggag 5520 ctgacaatga ttaaattgga cagaaatgag aagttcaggg acatccgagg tttcattcct 5580 aaggagagtg gtgagctatc tgaagcagta ctggcaataa ataccagtaa gtttccaaac 5640 atgttcatac cagtgggtgc cgttaaggag tatggtttct tgaacctcag tggtactcca 5700 acccacagaa tgctcatgta taattttccc actaaatcag ggcaatgtgg tggagtgttg 5760 atggcaactg gtaaagtcat aggtattcac gttggtggta atggacatca aggatttgct 5820 gccacactac tcagagacta cttcaatgaa gaacaaggtg aaattgagtg gatggagaca 5880 aacaaagaat caggttaccc aattatcaat gcaccaacta aaacaaagtt agaacctagt 5940 gtgtttcatg acattttccc cggtgttaag gaaccagcag ttttaaacaa aaatgatccc 6000 agacttaagg ttgactttga ggaggcgatc ttttccaagt acgtgggtaa tgtgaacact 6060 catgtagatg aatacatgca ggaagctatt gaccactatg ctgggcaatt aatgaccctt 6120 gacattgaca ttagtgagat gtgccttgag gatgctgttt atgggactga agggcttgaa 6180 gcacttgacc tgacaactag tgcaggatac ccttatgtga caatgggaat caaaaagaga 6240 gacatattat caaagaaaac tagagactta tccaagttaa aagagtgcat ggataaatat 6300 ggtctcaacc taccaatggt gacatatgtg aaggatgagt tgagaagcag ggagaaagtt 6360 gagcaaggga aatctcgctt gattgaagct tccagtctca atgattctgt agcaatgaga 6420 caatgttttg ggaatcttta taagacattc caccggaacc caggaacggt tactggtagt 6480 gcagtgggct gcaacccaga cacattttgg agtaaaattc cagtgatgtt ggacggtgag 6540 ctctttgcat ttgattacac tggttatgat gctagcttga gccctgtttg gttcgcgtgt 6600 cttagccgtg tgcttgaaaa attaggttat gattacaagg ctggcaggta catttcgtac 6660 ttgtgtcact cataccacct ttacaaaaac aagcactatt ttgtgcgagg tggtatgcct 6720 tcagggtgtt ctggtacatc aatcttcaac tccatgataa acaacatcat aattcgaaca 6780 ttgttgttaa aaacttacaa aaacattgat ttggataagt tcaagatgat tgcatatgga 6840 gatgatgtga ttgctagcta cccctaccca attgatgcag gtctacttgc taaggcgggg 6900 aaggagtatg gcctgacaat gactcctgct gacaaatcta aggagtttaa caacgtgaca 6960 tgggagaatg tcactttcct taagcggtac tttcgtgccg atgaacagta ccccttcctg 7020 gtccaccctg tgatgccaat gaaggagata catgagtcca ttagatggac aaaagatgca 7080 aaaaacacac aggaacatgt aagatcactg tgcgaattgg catggcacaa tggtcaagag 7140 gtttatgaag aatttttgag taaaattagg agtgttcctg ttgggcgatg tctactgcta 7200 cctgcataca caacactcag gcgcaagtgg ctcgaccaat tctaaaatgg ttttcaattt 7260 gaccttaatt cggcctaatt ggaagaccct gtcacgtatc tggacgtgac aaaagcgtga 7320 caggggtaaa tttagcacaa ccagagtgct t 7351 //