ID AF318062; SV 1; linear; genomic RNA; STD; VRL; 3065 BP. XX AC AF318062; XX DT 11-JAN-2001 (Rel. 66, Created) DT 16-JAN-2002 (Rel. 70, Last updated, Version 2) XX DE Peach sooty ringspot virus RNA polymerase gene, partial cds; coat protein DE gene, complete cds; and unknown genes. XX KW . XX OS Peach sooty ringspot virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Foveavirus. XX RN [1] RP 1-3065 RX DOI; 10.1007/s007050170071. RX PUBMED; 11676410. RA Gentit P., Foissac X., Svanella-Dumas L., Peypelut M., Candresse T.; RT "Characterization of two different apricot latent virus variants associated RT with peach asteroid spot and peach sooty ringspot diseases"; RL Arch. Virol. 146(8):1453-1464(2001). XX RN [2] RP 1-3065 RA Gentit P., Foissac X., Svanella-Dumas L., Candresse T.; RT "Variants of apricot latent foveavirus (ALV) isolated from south European RT orchards associated with peach asteroid spot and peach sooty ringspot RT diseases"; RL Acta Hortic. 0:0(2001). XX RN [3] RP 1-3065 RA Gentit P., Foissac X., Svanella-Dumas L., Peypelut M., Candresse T.; RT ; RL Submitted (30-OCT-2000) to the INSDC. RL Fruit Tree Virology Laboratory, CTIFL, Lanxade BP21, La Force 24130, France XX DR MD5; f8b533da6a5ba1bc8453704be4754f02. XX FH Key Location/Qualifiers FH FT source 1..3065 FT /organism="Peach sooty ringspot virus" FT /isolate="Caserta12" FT /mol_type="genomic RNA" FT /country="Italy" FT /db_xref="taxon:145398" FT misc_feature 1..3065 FT /note="putative member of foveavirus group; similar to FT apricot latent foveavirus" FT CDS <1..376 FT /codon_start=2 FT /product="RNA polymerase" FT /note="ORF1; viral RNA-dependent" FT /db_xref="GOA:Q9DKZ2" FT /db_xref="InterPro:IPR001788" FT /db_xref="UniProtKB/TrEMBL:Q9DKZ2" FT /protein_id="AAG48310.1" FT /translation="ARLKVTNAHSKFLDKIKLKAKVQFTVTPTFCGWGLCEHGVFKKPD FT LVLERLQIARETRNLENCIDNYAIEVSCAYRMGENLNLYLSPNEMDAHYNCVRFIILHN FT HLLKSNIKDLFRGDQSNGLL" FT CDS 475..1146 FT /codon_start=1 FT /product="unknown" FT /note="ORF2; part of triple gene block" FT /db_xref="GOA:Q9DKZ1" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9DKZ1" FT /protein_id="AAG48311.1" FT /translation="METVLSLLNEFGFERTVEPLSDPIVVHAVPGSGKTTLIKQALIRN FT HNIEAVTFGVPEKANIHGTYIKKARQGQRGRGNFSILDEYLSGEYSTGFNCLFSDPYQN FT HGDCLRAHFIGRCSHRFGRQTVQVLRDLGYNIASSKEDLVERKNIFKLVEPEGVVICLE FT KEVENFLAWHRVEFKLLCQVRGATFDVVTFVHEKPLEELVGPDLFVALTRHRNKLVLVT FT N" FT CDS 1148..1507 FT /codon_start=1 FT /product="unknown" FT /note="ORF3; part of triple gene block" FT /db_xref="GOA:Q9DKZ0" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q9DKZ0" FT /protein_id="AAG48312.1" FT /translation="MPFSQPPDYPKSVFPVAIGIAVAVVLFVLTRSTLPQVGDNIHNLP FT HGGNYQDGTKRINYCGPKNSFPSSSLVSGSTPMIIVVILLVLAIYVSEKWSCFGVRRCN FT CCVPGAPACTATNHQ" FT CDS 1416..1628 FT /codon_start=1 FT /product="unknown" FT /note="ORF4; part of triple gene block" FT /db_xref="GOA:Q9DKY9" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q9DKY9" FT /protein_id="AAG48313.1" FT /translation="MYPKSGLALGFVVAIVAYLVLLLAQQLITSRSNQCTIIITGESVS FT IVGCVYSDSFIELVKGLKPYYHPLG" FT CDS 1715..2935 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q9DKY8" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q9DKY8" FT /protein_id="AAG48314.1" FT /translation="MSTSGVNSETIPPPASTTETPPPVSAAVTTQATEATFATTNVQST FT TSPLPANTSSFEFSFTPATSISATPLSFPEPVVSQVAPLQPLQTDDQLRLRQMEAANQG FT FREGLGSRPQLLSPSSMNPFSTGNAFTQPIFAGQGSNTSVATESGGEPSFQRTFQAPHG FT VNPSSHGTGPQQRNPEQARELITPFTLGNRAPRRAASSTGGTRRRLDSIGLKSIMYEPQ FT AGVVANDTKMRAIGRALIEMGIREDQLTEVGVYLARHCADVGASDKSTLLGTFPGSDIT FT LEEVGTRIKQTEGCTLRQYCAYYAKHVWNLMLQTQKPPANWVGKEFKFETRYAAFDFFF FT GVESSASLEPADGLIRLPTQAERVANNTSKEIQMYRIRSMEGTQAVNFGEVTGGKIGPK FT PVLSIKK" FT CDS 1836..2063 FT /codon_start=1 FT /product="unknown" FT /note="ORF5a" FT /db_xref="UniProtKB/TrEMBL:Q9DKY7" FT /protein_id="AAG48315.1" FT /translation="MFSQPPVHCLQTPRALSSASHLLPPSVQLHCPFQSQLCHKLRHFS FT LYRLMISYGYDRWKQQIKALGRGWDLVLNC" FT CDS 2499..2759 FT /codon_start=1 FT /product="unknown" FT /note="ORF5b" FT /db_xref="UniProtKB/TrEMBL:Q9DKY6" FT /protein_id="AAG48316.1" FT /translation="MLGRRTSQHFWEHFLVPTSLLRRWALGLNRLKVAPSDSTAPTMPS FT MFGTLCCKPKNHLQIGWVRSSNLKRDMQHLISSLAWKAQPP" XX SQ Sequence 3065 BP; 841 A; 630 C; 709 G; 885 T; 0 other; tgctaggcta aaggtgacga atgctcattc caaatttttg gataaaatca agcttaaggc 60 caaagttcaa ttcacagtga ctccaacatt ttgtggctgg ggactctgtg aacatggggt 120 atttaagaag cctgatttgg tgcttgaaag gttgcagata gccagggaga caagaaatct 180 ggagaactgt attgataatt atgcaattga ggtctcctgt gcatacagaa tgggtgaaaa 240 tctaaatctc tatctaagtc ctaatgaaat ggatgctcat tacaactgtg ttagattcat 300 aattcttcat aatcatctcc tgaaatccaa catcaaggac ctctttaggg gtgatcagtc 360 caatggtcta ctgtgaatat tctcttcatg ctagttttaa tttgtggttt gctttcatgc 420 tttctagagt gagctagttt taagcatatt aggttaagct agtttgtgtt aataatggaa 480 actgtgttga gtttattgaa tgaatttgga tttgagcgga ctgtggaacc tttgagtgat 540 ccaattgttg tgcatgctgt tccagggtct ggaaaaacaa ccctaattaa gcaagccttg 600 atcagaaatc acaacattga agctgtgact tttggagtgc ctgagaaagc gaacattcac 660 ggaacttata ttaagaaggc cagacagggt cagagaggta gaggcaactt cagtattctt 720 gacgaatacc tctcaggtga atattcaact ggtttcaatt gcctgttttc tgacccttac 780 cagaatcacg gagactgctt gagggctcat ttcattggac gctgctcaca cagatttggg 840 aggcagactg tgcaggtttt aagagatctt ggatataata ttgcgagcag taaggaagat 900 ctggtcgaga ggaaaaacat atttaaactt gtagagccag agggcgtcgt aatttgcttg 960 gaaaaggaag ttgagaattt tctagcttgg catcgcgtgg aattcaaatt actttgccag 1020 gttagaggcg caacttttga cgttgtgacc tttgtgcatg agaagccctt ggaagagttg 1080 gttggccccg atctgtttgt tgccctaaca aggcatcgca acaagttggt gttggtcaca 1140 aattagcatg cctttctccc aacctcctga ttatcccaag agcgtttttc ctgttgcaat 1200 tggcattgct gtggcagttg tcctctttgt tctaactcgg agcactttac cacaagttgg 1260 agacaacata cataatttac cacatggtgg aaattaccag gacggaacaa agagaattaa 1320 ttattgtggg cctaagaata gctttccaag cagttccttg gtttctggca gtactcccat 1380 gattattgtt gtcatccttc ttgttctggc aatatatgta tccgaaaagt ggtcttgctt 1440 tggggttcgt cgttgcaatt gttgcgtacc tggtgctcct gcttgcacag caactaatca 1500 ccagtagatc aaatcagtgc accattatca taacaggcga atcagtttcc atagtaggtt 1560 gtgtgtattc agattctttc atagagctgg tgaagggcct taagccttat tatcacccat 1620 taggttaggg tgtggtagat caatattaaa taagttcggg agtgcgatta attaagtgtt 1680 cgaattctta attgtgttaa ctgcttttga aatcatgtct acatctggag tgaactctga 1740 aactattcca ccacccgcct caactactga gaccccacca cctgtatcgg cagctgtgac 1800 cacgcaagca actgaggcta catttgccac cactaatgtt cagtcaacca ccagtccact 1860 gcctgcaaac acctcgagct ttgagttcag cttcacacct gctacctcca tcagtgcaac 1920 tccactgtcc tttccagagc cagttgtgtc acaagttgcg ccacttcagc ctctacagac 1980 tgatgatcag ctacggttac gacagatgga agcagcaaat caaggcttta gggaggggtt 2040 gggatctcgt cctcaactgt tgagtccctc ttccatgaat ccattttcaa ctggcaacgc 2100 tttcactcaa cccatatttg ctggacaagg ctcaaacact tctgttgcaa ctgagtccgg 2160 tggggaaccc tcctttcaaa ggacctttca ggcacctcat ggtgttaacc catcttctca 2220 tggaacaggg cctcagcaac gaaatcctga gcaagccagg gagttgatta ccccttttac 2280 ccttgggaat agggcaccaa gaagggctgc atcatcaacc gggggaacta gaagaaggct 2340 agattcaatt ggactaaaga gtataatgta tgaacctcag gctggggttg ttgctaatga 2400 tacgaaaatg cgtgcaatcg gtagagctct aattgaaatg ggtattagag aggaccagct 2460 tacggaggtt ggagtttacc tggccaggca ttgtgcagat gttggggcgt cggacaagtc 2520 aacacttctg ggaacatttc ctggttccga catcactctt gaggaggtgg gcactaggat 2580 taaacagact gaaggttgca ccctcagaca gtactgcgcc tactatgcca agcatgtttg 2640 gaaccttatg ttgcaaaccc aaaaaccacc tgcaaattgg gtgggtaagg agttcaaatt 2700 tgaaacgaga tatgcagcat ttgatttctt ctttggcgtg gaaagctcag cctccttaga 2760 gccagctgat ggtctgatca ggctaccaac ccaagctgaa agggtggcta ataatacaag 2820 taaagagatc cagatgtatc ggatcagatc aatggagggt actcaagctg tgaactttgg 2880 agaagtcaca ggtggaaaga taggaccaaa accagttctt tccataaaga aatgatgatt 2940 caaaaccagt gtttcaattc cgtaatattt atgcttttta aataaagttg atcccaacct 3000 aaccgggacg gctaagtgtg ttttcatgta tgctttagct tatttttgtt ttaactagat 3060 ttttc 3065 //