ID   AF314531; SV 1; circular; genomic DNA; STD; VRL; 2753 BP.
XX
AC   AF314531;
XX
DT   12-FEB-2001 (Rel. 66, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 9)
XX
DE   Pepper leaf curl Bangladesh virus segment A, complete sequence.
XX
KW   .
XX
OS   Pepper leaf curl Bangladesh virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2753
RA   Tsai W.S., Green S.K., Rashid M.H.;
RT   ;
RL   Submitted (18-OCT-2000) to the INSDC.
RL   Plant Pathology-Virology Unit, Asian Vegetable Research and Development
RL   Center, P.O. Box 42, Shanhua, Tainan, Taiwan 741, Republic of China
XX
DR   MD5; 3c76fa8a385ab63ba6a0a6d6518ce966.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2753
FT                   /organism="Pepper leaf curl Bangladesh virus"
FT                   /segment="A component"
FT                   /mol_type="genomic DNA"
FT                   /country="Bangladesh:Bogra"
FT                   /note="collected 1999 from upward curled chilli leaves"
FT                   /db_xref="taxon:223305"
FT   CDS             146..502
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="pre-coat protein"
FT                   /db_xref="GOA:Q99DR5"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:Q99DR5"
FT                   /protein_id="AAK06534.1"
FT                   /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL
FT                   ISVIRARNYVEATSRYNHFHARLEGTPPSQLRQPIFQPCCCPHCPRHQSKSMGEQAHEQ
FT                   EAQDVQDVQKPRCS"
FT   CDS             306..1076
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q99DR4"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q99DR4"
FT                   /protein_id="AAK06533.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYSSRAAAPIVRVTKAKAWA
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVQHIGKVMCVSDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   CDS             complement(1073..1477)
FT                   /codon_start=1
FT                   /gene="C3"
FT                   /product="C3 protein"
FT                   /db_xref="GOA:Q99DR3"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q99DR3"
FT                   /protein_id="AAK06537.1"
FT                   /translation="MDSRTGAPITAAQAKNGVFIWEITNPLYFKITEHHNRPFLMNHDI
FT                   ITVQVQFNHNLRKALGIHKCFLTFRIWTTLQPRTGHFLRVFRTQVLQFLNNFAVISINN
FT                   VIRAVDHVLWNVVAQTIYVQSSNIIKFNIY"
FT   CDS             complement(1218..1622)
FT                   /codon_start=1
FT                   /gene="C2"
FT                   /product="C2 protein"
FT                   /db_xref="GOA:Q99DR2"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q99DR2"
FT                   /protein_id="AAK06536.1"
FT                   /translation="MRPSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLDCGCSYFIALR
FT                   CHGYGFTHRGTHHCSSGQEWRVYLGDNKSPVFQDNRAPQPAIPNEPRHHNSPSTVQSQP
FT                   EESVGDTQMFSNLPNLDDLTASDWSFLKGI"
FT   CDS             complement(1525..2610)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:Q99DR1"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q99DR1"
FT                   /protein_id="AAK06535.1"
FT                   /translation="MTRTHQFQVKAKNIFLTYPKCPIPKEQMLEILKSINCPSDKLFIR
FT                   VSQEKHQDGSLHIHALIQFKGKSQFRNPRHFDVTHPNNATQFHPNFQGAKSSSDVKSYI
FT                   EKDGDYIDWGRFQIDGRSARGGQQTANDAAAEALNAGSAEAALAIIREKLPKDFIFQYH
FT                   NLKCNLDRIFTPPLEVYVSPFCSSSFDQVPGELEEWASENVVSAAARPLRPMSIVVEGD
FT                   SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT                   QSNTKYGKPVQIKGGIPAIFLCNPGPHSSYKEFLDEEKNSALKNWALKNATFITLEGPL
FT                   YSGSNQSAAQASQEGDQASSR"
FT   CDS             complement(2196..2453)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q99DR0"
FT                   /protein_id="AAK06538.1"
FT                   /translation="MGACISTRSSNSKVNPSSETQDISMSLTLITPPNSTQISRELSPA
FT                   PMSSPTSRRTVITSTGVAFRSMEDLLEEVNRQLMMLQQRP"
XX
SQ   Sequence 2753 BP; 726 A; 579 C; 647 G; 801 T; 0 other;
     accggatggc cgcgattttt tttgtgtggg ccccacaacg cacgtgctga caaggacaaa        60
     tggaccaatg aaattggctc ctcgtagctt aattattcaa tggtccccta tataaacttg       120
     gtccccaagt agtgcacaca taccaatgtg ggatccatta ttaaacgagt tccccgaaac       180
     cgttcacggt tttcggtgta tgctagccgt taaatatctg cagctagtag aaaagacgta       240
     ttctccagat actttggggt acgacttaat ccgggattta atatcagtca tcagggccag       300
     aaattatgtc gaagcgacca gcagatataa tcatttccac gcccgcctcg aaggtacgcc       360
     gccgtctcaa cttcgacagc ccatattcca gccgtgctgc tgcccccatt gtccgcgtca       420
     ccaaagcaaa agcatgggcg aacaggccca tgaacaggaa gcccaggatg tacaggatgt       480
     acagaagccc agatgttcct agaggctgtg aaggcccgtg taaggtccag tcttttgagt       540
     ctagacatga tgtccaacac ataggcaaag tcatgtgtgt tagtgatgtt actcgtggaa       600
     ctgggctgac ccatcgagtt ggtaaaaggt tttgtgttaa gtccgtctat gttctgggca       660
     agatttggat ggatgagaac atcaagacta agaatcacac gaatagtgtt atgttcttcc       720
     ttgttagaga tcgtaggccc gtagataagc cccaagactt tggtgaggtg tttaacatgt       780
     ttgataatga gcccagtacg gcgactgtga agaacgtgca tcgtgatagg tatcaggtgc       840
     tcaggaagtg gcatgctact gtgacaggtg gtcaatatgc atcgaaggag caagctcttg       900
     tgaagaagtt tattagggtt aataattacg ttgtgtataa ccagcaggag gctggcaagt       960
     atgaaaacca cactgagaat gctttgatgt tgtacatggc gtgtactcat gcttctaacc      1020
     ctgtgtatgc tactttgaag atacggatct atttttatga ttccgtaaca aattaataaa      1080
     tattgaattt tattatgttt gaactttgta cataaattgt ttgcgctact acattccata      1140
     atacatgatc gactgctcta attacattgt ttatactaat tacagcaaaa ttatttaaaa      1200
     actgcaaaac ttgggtccta aataccctta agaaatgacc agtccgaggc tgtaaggtcg      1260
     tccagattcg gaaggttaga aaacatttgt gtatccccaa cgctttcctc aggttgtgat      1320
     tgaactgtac ttggactgtt atgatgtcgt ggttcattag gaatggccgg ttgtggtgct      1380
     cggttatctt gaaatacagg ggatttgtta tctcccagat aaacacgcca ttcttggcct      1440
     gagctgcagt gatgggtgcc cctgtgcgtg aatccatagc cgtggcagcg taatgcgatg      1500
     aaatatgaac agccgcagtc taggtcaacg cgacgacgcc tggtcccctt cttggctagc      1560
     ctgtgctgca ctttgattgg aacctgagta gagtgggcct tcgagggtga tgaaggtcgc      1620
     attctttaaa gcccaatttt tgagtgcgga attcttctct tcatccaaga actctttata      1680
     gctggaatgc ggtcctggat tgcagaggaa gatagcggga attccacctt taatttgcac      1740
     tggctttccg tatttcgtat ttgattgcca gtccctttgg gcccccatga attccttaaa      1800
     gtgttttagg tagtggggat cgacgtcatc aatgacgttg taccaggcgt cattactgta      1860
     gaccttaggg ctaaggtcta gatgaccaca caaataattg tgtggaccca acgacctagc      1920
     ccacatggtc ttccctgttc gactatcacc ctctaccaca atactcatgg gtctcaatgg      1980
     ccgcgcagcg gcactcacca cgttctcgga agcccattcc tcaagttctc cgggaacttg      2040
     atcaaaagaa gaagaacaaa aaggagaaac ataaacctcc aacggaggtg taaaaatcct      2100
     atctaaatta cattttaaat tatgatattg aaaaataaaa tcttttggga gtttttccct      2160
     tattattgct aatgccgctt cagccgaacc cgcatttaag gcctctgctg cagcatcatt      2220
     agctgtctgt tgacctcctc gagcagatct tccatcgatc tgaaagcgac cccagtcgat      2280
     gtaatcaccg tccttctcga tgtaggactt gacatcggag ctggacttag ctccctggaa      2340
     atttgggtgg aattgggtgg cgttattagg gtgagtgaca tcgaaatgtc ttgggtttct      2400
     gaactgggat ttacctttga attggatgag cgcgtggata tgcaagctcc catcttggtg      2460
     tttttcctgt gaaactctga taaataattt atcagaaggg caatttatag atttcagaat      2520
     ttctagcatt tgttctttcg gtattgggca ttttggataa gtgaggaaga tatttttggc      2580
     tttaacttgg aattggtgtg tacgtgtcat tttgaattgg gagctcttca aaactctacg      2640
     gaatggggtg ctttgggtgc ctatttatag tgagctccca aatggcattg acgtaattac      2700
     ggagaaaatt ccaaaatttt cccgctccta aaagcggcca tccgtataat att             2753
//