Dbfetch
ID AF314531; SV 1; circular; genomic DNA; STD; VRL; 2753 BP. XX AC AF314531; XX DT 12-FEB-2001 (Rel. 66, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 9) XX DE Pepper leaf curl Bangladesh virus segment A, complete sequence. XX KW . XX OS Pepper leaf curl Bangladesh virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2753 RA Tsai W.S., Green S.K., Rashid M.H.; RT ; RL Submitted (18-OCT-2000) to the INSDC. RL Plant Pathology-Virology Unit, Asian Vegetable Research and Development RL Center, P.O. Box 42, Shanhua, Tainan, Taiwan 741, Republic of China XX DR MD5; 3c76fa8a385ab63ba6a0a6d6518ce966. XX FH Key Location/Qualifiers FH FT source 1..2753 FT /organism="Pepper leaf curl Bangladesh virus" FT /segment="A component" FT /mol_type="genomic DNA" FT /country="Bangladesh:Bogra" FT /note="collected 1999 from upward curled chilli leaves" FT /db_xref="taxon:223305" FT CDS 146..502 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:Q99DR5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q99DR5" FT /protein_id="AAK06534.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARLEGTPPSQLRQPIFQPCCCPHCPRHQSKSMGEQAHEQ FT EAQDVQDVQKPRCS" FT CDS 306..1076 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q99DR4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q99DR4" FT /protein_id="AAK06533.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYSSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1073..1477) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:Q99DR3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q99DR3" FT /protein_id="AAK06537.1" FT /translation="MDSRTGAPITAAQAKNGVFIWEITNPLYFKITEHHNRPFLMNHDI FT ITVQVQFNHNLRKALGIHKCFLTFRIWTTLQPRTGHFLRVFRTQVLQFLNNFAVISINN FT VIRAVDHVLWNVVAQTIYVQSSNIIKFNIY" FT CDS complement(1218..1622) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:Q99DR2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q99DR2" FT /protein_id="AAK06536.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLDCGCSYFIALR FT CHGYGFTHRGTHHCSSGQEWRVYLGDNKSPVFQDNRAPQPAIPNEPRHHNSPSTVQSQP FT EESVGDTQMFSNLPNLDDLTASDWSFLKGI" FT CDS complement(1525..2610) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q99DR1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q99DR1" FT /protein_id="AAK06535.1" FT /translation="MTRTHQFQVKAKNIFLTYPKCPIPKEQMLEILKSINCPSDKLFIR FT VSQEKHQDGSLHIHALIQFKGKSQFRNPRHFDVTHPNNATQFHPNFQGAKSSSDVKSYI FT EKDGDYIDWGRFQIDGRSARGGQQTANDAAAEALNAGSAEAALAIIREKLPKDFIFQYH FT NLKCNLDRIFTPPLEVYVSPFCSSSFDQVPGELEEWASENVVSAAARPLRPMSIVVEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPHSSYKEFLDEEKNSALKNWALKNATFITLEGPL FT YSGSNQSAAQASQEGDQASSR" FT CDS complement(2196..2453) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q99DR0" FT /protein_id="AAK06538.1" FT /translation="MGACISTRSSNSKVNPSSETQDISMSLTLITPPNSTQISRELSPA FT PMSSPTSRRTVITSTGVAFRSMEDLLEEVNRQLMMLQQRP" XX SQ Sequence 2753 BP; 726 A; 579 C; 647 G; 801 T; 0 other; accggatggc cgcgattttt tttgtgtggg ccccacaacg cacgtgctga caaggacaaa 60 tggaccaatg aaattggctc ctcgtagctt aattattcaa tggtccccta tataaacttg 120 gtccccaagt agtgcacaca taccaatgtg ggatccatta ttaaacgagt tccccgaaac 180 cgttcacggt tttcggtgta tgctagccgt taaatatctg cagctagtag aaaagacgta 240 ttctccagat actttggggt acgacttaat ccgggattta atatcagtca tcagggccag 300 aaattatgtc gaagcgacca gcagatataa tcatttccac gcccgcctcg aaggtacgcc 360 gccgtctcaa cttcgacagc ccatattcca gccgtgctgc tgcccccatt gtccgcgtca 420 ccaaagcaaa agcatgggcg aacaggccca tgaacaggaa gcccaggatg tacaggatgt 480 acagaagccc agatgttcct agaggctgtg aaggcccgtg taaggtccag tcttttgagt 540 ctagacatga tgtccaacac ataggcaaag tcatgtgtgt tagtgatgtt actcgtggaa 600 ctgggctgac ccatcgagtt ggtaaaaggt tttgtgttaa gtccgtctat gttctgggca 660 agatttggat ggatgagaac atcaagacta agaatcacac gaatagtgtt atgttcttcc 720 ttgttagaga tcgtaggccc gtagataagc cccaagactt tggtgaggtg tttaacatgt 780 ttgataatga gcccagtacg gcgactgtga agaacgtgca tcgtgatagg tatcaggtgc 840 tcaggaagtg gcatgctact gtgacaggtg gtcaatatgc atcgaaggag caagctcttg 900 tgaagaagtt tattagggtt aataattacg ttgtgtataa ccagcaggag gctggcaagt 960 atgaaaacca cactgagaat gctttgatgt tgtacatggc gtgtactcat gcttctaacc 1020 ctgtgtatgc tactttgaag atacggatct atttttatga ttccgtaaca aattaataaa 1080 tattgaattt tattatgttt gaactttgta cataaattgt ttgcgctact acattccata 1140 atacatgatc gactgctcta attacattgt ttatactaat tacagcaaaa ttatttaaaa 1200 actgcaaaac ttgggtccta aataccctta agaaatgacc agtccgaggc tgtaaggtcg 1260 tccagattcg gaaggttaga aaacatttgt gtatccccaa cgctttcctc aggttgtgat 1320 tgaactgtac ttggactgtt atgatgtcgt ggttcattag gaatggccgg ttgtggtgct 1380 cggttatctt gaaatacagg ggatttgtta tctcccagat aaacacgcca ttcttggcct 1440 gagctgcagt gatgggtgcc cctgtgcgtg aatccatagc cgtggcagcg taatgcgatg 1500 aaatatgaac agccgcagtc taggtcaacg cgacgacgcc tggtcccctt cttggctagc 1560 ctgtgctgca ctttgattgg aacctgagta gagtgggcct tcgagggtga tgaaggtcgc 1620 attctttaaa gcccaatttt tgagtgcgga attcttctct tcatccaaga actctttata 1680 gctggaatgc ggtcctggat tgcagaggaa gatagcggga attccacctt taatttgcac 1740 tggctttccg tatttcgtat ttgattgcca gtccctttgg gcccccatga attccttaaa 1800 gtgttttagg tagtggggat cgacgtcatc aatgacgttg taccaggcgt cattactgta 1860 gaccttaggg ctaaggtcta gatgaccaca caaataattg tgtggaccca acgacctagc 1920 ccacatggtc ttccctgttc gactatcacc ctctaccaca atactcatgg gtctcaatgg 1980 ccgcgcagcg gcactcacca cgttctcgga agcccattcc tcaagttctc cgggaacttg 2040 atcaaaagaa gaagaacaaa aaggagaaac ataaacctcc aacggaggtg taaaaatcct 2100 atctaaatta cattttaaat tatgatattg aaaaataaaa tcttttggga gtttttccct 2160 tattattgct aatgccgctt cagccgaacc cgcatttaag gcctctgctg cagcatcatt 2220 agctgtctgt tgacctcctc gagcagatct tccatcgatc tgaaagcgac cccagtcgat 2280 gtaatcaccg tccttctcga tgtaggactt gacatcggag ctggacttag ctccctggaa 2340 atttgggtgg aattgggtgg cgttattagg gtgagtgaca tcgaaatgtc ttgggtttct 2400 gaactgggat ttacctttga attggatgag cgcgtggata tgcaagctcc catcttggtg 2460 tttttcctgt gaaactctga taaataattt atcagaaggg caatttatag atttcagaat 2520 ttctagcatt tgttctttcg gtattgggca ttttggataa gtgaggaaga tatttttggc 2580 tttaacttgg aattggtgtg tacgtgtcat tttgaattgg gagctcttca aaactctacg 2640 gaatggggtg ctttgggtgc ctatttatag tgagctccca aatggcattg acgtaattac 2700 ggagaaaatt ccaaaatttt cccgctccta aaagcggcca tccgtataat att 2753 //