ID   AF306548; SV 1; linear; mRNA; STD; VRL; 1805 BP.
XX
AC   AF306548;
XX
DT   05-SEP-2001 (Rel. 69, Created)
DT   29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE   Infectious salmon anemia virus putative polymerase mRNA, complete cds.
XX
KW   .
XX
OS   Salmon isavirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes;
OC   Articulavirales; Orthomyxoviridae; Isavirus.
XX
RN   [1]
RP   1-1805
RX   DOI; 10.1023/A:1011110105819.
RX   PUBMED; 11450947.
RA   Ritchie R.J., Heppell J., Cook M.B., Jones S., Griffiths S.G.;
RT   "Identification and characterization of segments 3 and 4 of the ISAV
RT   genome";
RL   Virus Genes 22(3):289-297(2001).
XX
RN   [2]
RP   1-1805
RA   Ritchie R.J., Heppell J., Cook M.B., Jones S., Griffiths S.G.;
RT   ;
RL   Submitted (18-SEP-2000) to the INSDC.
RL   FFA, RPC, 921 College Hill Rd., Fredericton, NB E3B 6Z9, Canada
XX
DR   MD5; a683800d7f04f16e68f49e7b2f8a2b1e.
DR   EuropePMC; PMC3003268; 21092282.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1805
FT                   /organism="Salmon isavirus"
FT                   /segment="4"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:55987"
FT   misc_feature    1..8
FT                   /note="viral consensus motif"
FT   CDS             24..1760
FT                   /codon_start=1
FT                   /product="putative polymerase"
FT                   /db_xref="UniProtKB/TrEMBL:Q91BR4"
FT                   /protein_id="AAK97305.1"
FT                   /translation="MDNLRECINRKRRLLALPDVPETSDAFLSDLRHLYMCVAFCDQHK
FT                   TTGDESRFTNLELLDQDEALGAQRAFEAKHGIKGGSLGDVLDHELKKVIEFTFTSGSLY
FT                   IAEQRKRKTQADSIIVCVSEGLNDFSVSHGVLDMGLVETGVNAVRDFCTQNGIPMKINQ
FT                   VGSTRTPTPISTCKISEQITRQINSTITERKMETVLAAIAIKPELKLTQKGCRPCKELE
FT                   DENILWMDPQFCEIDESFPYRGGPYGNFLQELLLTTNDVETNGKDREEVVKKILDNKAF
FT                   TVESGECIITLPDKMTCFGEQEKKRPATIDEVRTAGERFEQSVKPKTQRYGRLSDKWME
FT                   LEKFIFTASKTEVDTFLSVGTERLESVGVCVGALHRATTTRIIRPMIQGGKCWGMMFKT
FT                   KSKMGDTRKEGYCHAIIFGKGEDKSGQNKMTMMGKTVHWHLRVVKSKGDWMAQQLCANK
FT                   SRIWEHDPELVTEGVTVLMTPFSQKIATISRWRAMRLDSMFHVSSAWHHSPACEAASAM
FT                   LRKFVEIVHAINQKRDWGVVGSMEDMVKEVEEIGEHLQTACDFRVYNMCKALIQKIAVS
FT                   TQ"
XX
SQ   Sequence 1805 BP; 639 A; 309 C; 444 G; 413 T; 0 other;
     agctaagatt ggctattttc aagatggata acctccgtga atgcataaac cgcaaaagaa        60
     gactacttgc cttaccagat gttcctgaaa cttcggatgc ctttctaagt gatttgagac       120
     atctatacat gtgtgttgct ttctgtgatc aacacaaaac cactggagac gaatcaagat       180
     tcaccaacct ggaattactt gaccaagatg aagcactagg tgcccaaaga gcttttgaag       240
     ccaaacatgg aataaaagga ggttctttag gagacgttct tgaccatgaa ctgaaaaagg       300
     tcattgaatt tacttttact tctggaagtt tgtatattgc cgaacaaaga aaaagaaaga       360
     ctcaagcaga ctcaataatt gtgtgcgttt cagaaggact taacgacttc agcgtatcac       420
     acggagtgct agacatggga cttgtggaaa caggggtgaa tgcagtaaga gatttctgca       480
     cacaaaacgg aataccaatg aagataaatc aggtaggatc cacgagaaca ccaacaccga       540
     tcagcacatg caaaatctct gaacaaataa cacgacagat aaacagtaca attactgaaa       600
     ggaaaatgga aacagtactg gcagcaatcg caattaaacc agaactcaaa ctaactcaga       660
     aaggatgcag accttgtaaa gaactagaag atgaaaatat tctgtggatg gaccctcaat       720
     tctgtgaaat tgatgaaagt tttccttaca gaggagggcc atacgggaac ttcctgcaag       780
     aattgctgct tacaaccaac gacgtagaga ccaacgggaa agacagagaa gaagtagtaa       840
     agaagatact ggataacaag gcgttcaccg ttgaaagtgg tgaatgcata ataacacttc       900
     cagacaaaat gacttgtttc ggagaacagg agaagaagag accagcaaca atagacgaag       960
     tgagaaccgc aggagaaagg tttgaacaga gtgttaaacc gaaaacccaa agatatggaa      1020
     ggttatcaga caaatggatg gagcttgaaa agtttatctt tactgcaagc aaaacagaag      1080
     tggatacttt cctttctgta gggaccgaaa gacttgagtc ggttggagtg tgtgtcggag      1140
     ctttacacag agcgaccaca accaggataa ttagacctat gattcaagga gggaaatgtt      1200
     gggggatgat gttcaaaaca aagtccaaaa tgggagacac gaggaaggaa ggatactgtc      1260
     acgcaatcat tttcggaaaa ggggaagata aatcaggaca aaacaagatg acaatgatgg      1320
     ggaaaacagt acattggcat ctaagagtag ttaagtctaa aggagactgg atggcgcaac      1380
     aactctgtgc aaacaaaagc agaatatggg aacatgaccc tgagctagta acagaaggag      1440
     tgacagttct aatgacgcct ttttctcaga aaattgccac cattagtaga tggagggcaa      1500
     tgaggttaga cagcatgttt catgtttcta gtgcctggca tcattcacct gcgtgtgaag      1560
     ctgcatcggc aatgctgaga aagtttgtgg agatagtaca tgccatcaac cagaaaagag      1620
     attggggtgt tgtggggagt atggaggaca tggtgaagga agtggaggaa ataggggagc      1680
     acttgcagac ggcatgtgat tttagagttt acaacatgtg caaagccttg attcagaaaa      1740
     ttgcagtcag tacccaatga gtggttattt acttgtaaat tgttgtgtgt ttgacgatat      1800
     gtatt                                                                  1805
//