ID AF291705; SV 1; circular; genomic DNA; STD; VRL; 2622 BP. XX AC AF291705; XX DT 25-SEP-2000 (Rel. 65, Created) DT 31-AUG-2025 (Rel. 144, Last updated, Version 9) XX DE Tomato rugose mosaic virus-[Ube] DNA-A, complete sequence. XX KW . XX OS Tomato rugose mosaic virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus solanumrugosi. XX RN [1] RP 1-2622 RX AGRICOLA; IND43821638. RX DOI; 10.1111/j.1365-3059.2006.01395.x. RA Fernandes J.J., Carvalho M.G., Andrade E.C., Brommonschenkel S.H., RA Fontes E.P.B., Zerbini F.M.; RT "Biological and molecular properties of Tomato rugose mosaic virus (ToRMV), RT a new tomato-infecting begomovirus from Brazil"; RL Plant Pathol. 55(4):513-522(2006). XX RN [2] RP 1-2622 RA Fernandes J.J., Fontes E.P.B., Brommonschenkel S.H., Carvalho M.G., RA Zambolim E.M., Zerbini F.M.; RT "Molecular Cloning and Characterization of Tomato rugose mosaic virus RT (TRMV), a Begomovirus Isolated from Tomatoes at Triangulo Mineiro, Minas RT Gerais, Brazil"; RL Unpublished. XX RN [3] RP 1-2622 RA Fernandes J.J., Zerbini F.M.; RT ; RL Submitted (31-JUL-2000) to the INSDC. RL Dept. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n RL - Centro, Vicosa, MG 36571-000, Brazil XX DR MD5; f97f1c0559e02bcec4c0d197c3270ee8. XX FH Key Location/Qualifiers FH FT source 1..2622 FT /organism="Tomato rugose mosaic virus" FT /mol_type="genomic DNA" FT /geo_loc_name="Brazil: Uberlandia, Triangulo Mineiro, Mians FT Gerais" FT /note="previously referred to as Tomato geminivirus FT Uberlandia; TRMV" FT /db_xref="taxon:134599" FT CDS complement(join(1570..2622,1..6)) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /note="Rep" FT /protein_id="AAG15546.1" FT /translation="MPSATRRFQIKAKNYFLTYPKCSISKEEALSQLKNLNTPTNKKFI FT KVCRELHENGEPHLHVLLQFEGNYCCQNQRFFDLVSPTRSTHFHPNIQRAKSSSDVKSY FT VDKDGDTIEWGEFQIDGRSARGGCQTANDAAAEALNAPSKDIALQIIREKMPEKFLFQF FT HNLNSNLDRIFARAPEPWAPTFPLSSFTNVPREMQDWADDYFGRGAAARPERPISIIIE FT GDSRTGKTMWARALGAHNYLSGHLDFNPRVYSNHVEYNVIDDIAPHYLKLKHWKELIGA FT QRDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKCFLDKEENSALSSWTKHNAQFIFL FT NSPLYQSSTSGC" FT gene complement(join(1..6,1570..2622)) FT /gene="AC1" FT rep_origin 1..227 FT /note="common region" FT gene complement(240..992) FT /gene="AC4" FT CDS complement(240..992) FT /codon_start=1 FT /gene="AC4" FT /product="putative AC4 protein" FT /protein_id="AAG15549.1" FT /translation="MILVFSSFLMVVDDMIVDLPEPLDKRLLVACVLSTCDLSIELMHD FT LKTITEIVFHSGGARLVVEHVKHLAKVHRGTIRSTVPDQPEHGTVRVVLQLDVLIHPYL FT TQNIHRLNTETLTHTVCNTVTTCHIGDAHHLTSMGDIVTLFKRLDFTWAFTTPWNIGGS FT IHPIYLGLPVHGPVYPVSGLVGPWPNSCTWRIINAPANLRCTSHVAPWGIALRHFELKL FT TTYARLIYSRYATWALSSSKYLSSSNAS" FT gene 342..1097 FT /gene="AV1" FT CDS 342..1097 FT /codon_start=1 FT /gene="AV1" FT /product="capsid protein" FT /note="CP" FT /protein_id="AAG15545.1" FT /translation="MPKRDAPWRHMASTSKISRGVNNSPRAGVGPRSNKATDWVNRPMY FT RKPKIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHTGKVMCVSDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSAMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(1094..1492) FT /gene="AC3" FT CDS complement(1094..1492) FT /codon_start=1 FT /gene="AC3" FT /product="replication-enhancer protein" FT /note="REn" FT /protein_id="AAG15548.1" FT /translation="MDSRTGELITAHQAENGVYTWEISNPLYFKMYNVEDILYTRTRVY FT HVQIRFNHNLRRVLGLHKAYLNFQIWTTSLRASGMTYLNRFKYLLMLYIDQLGVISVNN FT VIRAVRFATDRQYVNAVLENHSIKVKIY" FT gene complement(1239..1628) FT /gene="AC2" FT CDS complement(1239..1628) FT /codon_start=1 FT /gene="AC2" FT /product="trans-activation protein" FT /note="TrAP; trans-activates expression of the AV1 and BV1 FT ORFs" FT /protein_id="AAG15547.1" FT /translation="MHNSSSSTPPSIKVQHRAAKRRAIRRRRIDLQCGCSIFVHIDCAG FT HGFTHRGTHHCTSGREWRVYLGNIKSPLFQDVQRRGHTIHEDQSLPRPNTVQPQPEEST FT GSPQGLSQLPNLDDIPESFWDDIFK" XX SQ Sequence 2622 BP; 684 A; 562 C; 600 G; 776 T; 0 other; tggcatattt gtaaatatga cccttactac caattggtag ctgctctaaa actcatatga 60 attggtagtt atggtagctc ttatatacta gaagttcctt taaggagatt gctacacgtg 120 gccggccatc cgatataata ttaccggatg gccgcgcgat ttttataagg cccatttagc 180 atcgggcctc tgttgggggc ctctcacctt taattttatt gaaaataatt ttggcccaat 240 catgatgcat ttgacgagct aagatattta gaactactta acgcccaagt tgcataacgg 300 ctataaatta aacgtgcata tgtcgttaac tttaattcaa aatgcctaag cgcgatgccc 360 catggcgcca catggctagt acatctaaga ttagccgggg cgttaataat tctccacgtg 420 caggagttgg gccacggtcc aacaaggcca ctgactgggt aaacaggccc atgtacagga 480 agcccaagat atatcggatg tatagaaccc ccgatgttcc aaggggttgt gaaggcccat 540 gtaaagtcca gtcgtttgaa cagcgtcacg atatctccca tactggtaag gtgatgtgcg 600 tctccgatgt gacacgtggt aacggtatta cacaccgtgt gggtaagcgt ttctgtgtta 660 agtctgtgta tattctgggt aagatatgga tggatgagaa catcaagttg aagaaccaca 720 cgaacagtgc catgttctgg ttggtcaggg accgtagacc gtatggtacc cctatggact 780 ttggccaggt gtttaacatg ttcgacaacg agcctagcac cgccactgtg aaaaacgatc 840 tccgtgatcg ttttcaagtc atgcataagt tctatgctaa ggtcacaggt ggacaatacg 900 caagcaacga gcaggcgctt gtcaagcggt tctggaaggt caacaatcat gtcgtctaca 960 accatcaaga agctggaaaa tacgagaatc atacggagaa cgccctatta ttgtatatgg 1020 catgtactca tgcctcaaac cccgtgtacg caactttaaa aattcggatc tatttttatg 1080 attcgataac aaattaataa attttgactt ttattgaatg attctcgagt acagcattta 1140 catattgtct gtctgttgcg aagcgaacag ctctaattac attattaact gaaataacgc 1200 ctagctgatc tatgtacaac ataagtaaat atttaaatct atttaaatat gtcatcccag 1260 aagctctcag ggatgtcgtc cagatttgga agttgagata agccttgtgg agacccagta 1320 ctctcctcag gttgtggttg aaccgtattt ggacgtggta gactctggtc ctcgtgtata 1380 gtatgtcctc gacgttgtac atcttgaaat aaaggggatt tgatatttcc caagtataca 1440 cgccattctc tgcctgatgt gcagtgatga gttcccctgt gcgtgaatcc atgtcctgcg 1500 caatctatgt gtacgaaaat ggagcagccg cactgtaaat caattcgtct tcttcgtata 1560 gctctcctct tagcagcccg atgttgaact ttgatagagg ggggagttga ggaagatgaa 1620 ttgtgcattg tgctttgtcc aactacttaa tgctgagttc tcttctttgt cgaggaaaca 1680 tttatagctg gccccctcgc caggattgca aagcacgatg catgggatac cacctttaat 1740 ttgaactggc tttccgtatt tacagtttga ttgccaatcc ctttgggccc caatcaattc 1800 tttccagtgc tttaacttta gatagtgcgg tgcgatgtca tcgatgacgt tatattcaac 1860 atgatttgaa taaaccctag gattgaaatc gaggtgacca ctcaaataat tatgggcccc 1920 taatgcacgt gcccacatcg tctttcccgt tcgagaatca ccttcaatga tgatactaat 1980 aggtcgttcc ggccgcgcag cggcacctct cccaaaatag tcatctgccc aatcttgcat 2040 ctctctcggt acgttagtga aagaggagag gggaaacgta ggggcccatg gctccggagc 2100 ccttgcaaat atcctatcta aattactatt tagattgtga aactgaaata agaacttttc 2160 cggcatcttc tcccggatta tctgcaaggc gatgtctttg gaaggtgcgt tcaaggcttc 2220 tgcggcagcg tcgttagctg tctggcaacc gcctctagca cttctgccgt cgatttggaa 2280 ttccccccat tcgatagtat ctccgtcctt gtcgacatag gacttgacgt cggacgatga 2340 tttagctctc tgaatgttcg gatggaaatg tgttgacctt gttggggaga ccaggtcgaa 2400 gaatcgttga ttttggcagc agtagttgcc ttcgaattga agaagcacat ggagatgagg 2460 ctccccattt tcatggagct ctctgcaaac tttgatgaac ttcttatttg taggagtgtt 2520 taggtttttc aattgggaaa gtgcttcttc tttcgatatt gagcatttgg gatatgttag 2580 gaaataattc ttggctttta tttgaaagcg ccttgtagct ga 2622 //