ID AF278535; SV 1; linear; genomic RNA; STD; VRL; 2591 BP. XX AC AF278535; XX DT 02-JUL-2001 (Rel. 68, Created) DT 05-JAN-2012 (Rel. 111, Last updated, Version 4) XX DE Prunus necrotic ringspot virus isolate CH57 segment RNA2, complete DE sequence. XX KW . XX OS Prunus necrotic ringspot virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-2591 RX DOI; 10.1007/s007050170151. RX PUBMED; 11402868. RA Di Terlizzi B., Skrzeczkowski L.J., Mink G.I., Scott S.W., Zimmerman M.T.; RT "The RNA 5 of Prunus necrotic ringspot virus is a biologically inactive RT copy of the 3'-UTR of the genomic RNA 3"; RL Arch. Virol. 146(4):825-833(2001). XX RN [2] RP 1-2591 RA Scott S.W., Zimmerman M.T.; RT ; RL Submitted (14-JUN-2000) to the INSDC. RL Plant Pathology & Physiology, Clemson University, P.O. Box 340377, Clemson, RL SC 29634-0377, USA XX DR MD5; b1ce4b864f69f2cc21d657fedd959b6e. DR EuropePMC; PMC5478126; 28632759. DR EuropePMC; PMC5491605; 28713347. XX FH Key Location/Qualifiers FH FT source 1..2591 FT /organism="Prunus necrotic ringspot virus" FT /segment="RNA2" FT /host="cherry" FT /isolate="CH57" FT /mol_type="genomic RNA" FT /db_xref="taxon:37733" FT CDS 27..2426 FT /codon_start=1 FT /product="polymerase p2" FT /db_xref="GOA:Q91NQ0" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q91NQ0" FT /protein_id="AAK69475.1" FT /translation="MNPLNQLLSHGCSAISSALHRDVAYTQISDECFDSHFTQISTEYS FT LTTSVRKLFEAYMVTMFLKKHMSYVFEDFIGSEMGPYVQTRWRIVFDLDEVEEEYVYKP FT DFYHYDVYDYEMGVDIPASIMDDIPFCEDAEAVTCRNCGSFDEMETVYQAATSSDESRA FT NVCDVDAPHDTIKWSDEPDLTVDDPSKLHDLDDEVPQLQLETVGRVVQSVEPLVPDINS FT FETNQLHLVKEVVLDRFESILECHEKVLARNDWKSLAMYVPTGEIPSVSDILEIPVKHT FT QPEFIQMAIDEMLPGVSDFDDRFFQEIVETSDINLEIDRASIDMSVFNDWTPKSGRLNG FT LFQTGNISKRVPTFREASLAIKKRNLNVPDLQQVLHEDDEARFIANKFINTVIDPNKLA FT QFPGYISEGEMGYFNKYLSGKTVPDDAFVDPCALVSMDKYRHMIKTQLKPVEDTSQLFE FT RPLAATITYHDKGKVMSTSPIFLMMCNRLLLCLNDKISIPSGKHHQLFSLDPFAFEMTK FT EFKEIDFSKFDKSQQRLHHLIQFHIFTALGAPKDFLDMWFASHEISHIRDGPCGIGFSV FT NYQRRTGDACTYLGNTIITLSALAYMYDLLDPNVTFVIASGDDSLIGSIKPLDRSEEFK FT FVTLFNFEAKFPHNQPFVCSKFLCLLPTVSGGKKVLAVPNALKLNIKLGVKDLAPCVFD FT AWYNSWLDLIWYFDNYLVVSTMKDYISHRYLRRQTCYQEGAMLAYRTIFSSKEKCLKSL FT FGITSKDLEAMLPMSKNGKGSNRAECSKNNKTYRPPKSTRCRNSAN" XX SQ Sequence 2591 BP; 721 A; 473 C; 615 G; 782 T; 0 other; gtttttgtac tcgtggttga gttacaatga atcctctaaa tcagctattg tcacatgggt 60 gttctgctat ttcctcagct ttacatagag atgttgctta cacccagatt tctgatgagt 120 gttttgattc tcatttcact cagatttcca ccgaatactc tcttactact tccgttagga 180 aattgtttga agcgtacatg gtgacgatgt ttcttaagaa gcatatgagt tatgtcttcg 240 aggactttat aggatccgag atgggtccgt atgtccagac cagatggcgg atcgtttttg 300 atctggacga ggtcgaagaa gaatatgtct acaaacccga cttctatcat tacgatgttt 360 atgattacga aatgggtgtg gatatacctg catcgataat ggacgatatt ccattctgtg 420 aagatgcaga agcagtgacg tgtcgcaatt gtggtagttt cgatgagatg gaaacggtgt 480 accaagcagc gacgtcttct gacgagtcac gtgccaacgt ttgtgatgtt gatgcccctc 540 acgataccat caagtggtct gacgaacccg atttgacggt agatgaccca tcgaagttgc 600 acgatttgga cgatgaagtt ccgcagttgc aattagagac tgttggtcgg gtagtgcagt 660 ccgtggagcc tttggtcccg gacattaact cgttcgagac gaatcagttg cacttagtga 720 aggaagtggt attggacaga tttgagtcca tacttgaatg tcacgaaaag gtattggcta 780 gaaacgattg gaagtctcta gctatgtatg taccgactgg tgagattcca tcagttagtg 840 acatattgga aattccggta aaacacacgc aaccggagtt cattcaaatg gcaatagatg 900 agatgttgcc aggagtttca gattttgatg ataggttttt ccaagaaata gttgaaacgt 960 ctgacattaa tctggagata gacagagcat ctatcgatat gtcagtgttc aacgactgga 1020 ctccgaagtc gggtagactg aatggactgt tccaaacagg taatatctcg aaaagagtac 1080 cgactttccg cgaagcgtct ctcgctatta agaagcggaa tttgaatgtc cctgatttgc 1140 agcaagtttt gcatgaggac gatgaagcta gatttatagc taataagttc ataaacaccg 1200 ttatcgatcc gaataaattg gctcagtttc caggatacat atccgaaggt gaaatgggtt 1260 atttcaataa gtatctatca gggaaaactg tacccgatga tgcttttgtg gatccatgtg 1320 cgttggtctc gatggacaag tatcgacata tgattaagac acaacttaaa cctgtcgaag 1380 atacgtctca attgttcgag agacctttag cggcaactat tacttatcat gacaaaggaa 1440 aggttatgtc aacatcaccg atattcctga tgatgtgtaa tcgtttgctg ctgtgtttga 1500 acgataagat ttccattcct tcgggaaaac atcatcagtt gttctcgttg gatccctttg 1560 cgtttgaaat gacgaaagag tttaaagaga ttgatttttc gaaattcgat aagtctcagc 1620 aaaggttaca tcacctgatt caatttcaca ttttcaccgc tttaggtgct ccgaaagatt 1680 tcctcgatat gtggtttgca tcacacgaga tatcgcacat ccgtgatgga ccttgtggta 1740 tcggatttag tgtgaattac cagaggcgta caggagatgc atgcacgtat ttgggtaata 1800 ctattattac tttgtctgcc ctggcgtaca tgtatgactt gctggatccg aacgtgacgt 1860 ttgtcatagc ttcaggagac gatagtctta taggttcaat taaacctctg gaccgatctg 1920 aagagtttaa atttgtcacg ttgttcaatt ttgaagcgaa atttccacat aaccaacctt 1980 ttgtgtgcag taaattttta tgtttactgc ctactgtgag tgggggaaag aaggttctgg 2040 cagttccgaa tgctttaaag ttgaatataa aactaggtgt taaggatctg gcaccatgtg 2100 tttttgatgc ttggtataac tcctggttgg atttaatttg gtacttcgac aattacctgg 2160 ttgtgtcgac tatgaaagac tatatcagcc ataggtattt aagaagacag acatgttacc 2220 aagaaggtgc gatgttggct tataggacga tattctcaag taaagagaaa tgtttgaagt 2280 ccttgtttgg tatcacttcc aaagatctgg aagcgatgtt gcccatgagt aaaaatggga 2340 aaggttctaa tagagccgag tgttcaaaga ataacaaaac atatagacct ccgaagagta 2400 ctagatgtag gaattctgcg aactagaacg agttgaacgc gttcgaattt cctcgaatag 2460 agaagaatcg taccaccgtg tgggtttgcg attagttcct agagagttgc ttccggctct 2520 cgagttcata ggtacttacc tgctttgcag atgcctacga cgtgaagtcg tagatgcccc 2580 gatagggaag c 2591 //