ID AF272736; SV 2; linear; genomic RNA; STD; VRL; 6451 BP. XX AC AF272736; XX DT 13-SEP-2000 (Rel. 65, Created) DT 26-AUG-2005 (Rel. 85, Last updated, Version 2) XX DE Potato virus X strain Taiwan, complete genome. XX KW . XX OS Potato virus X OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6451 RA Liao J.-T., Hsu Y.-H.; RT "Potato virus X Taiwan strain sequence"; RL Unpublished. XX RN [2] RP 1-6451 RA Liao J.-T., Hsu Y.-H.; RT ; RL Submitted (26-MAY-2000) to the INSDC. RL Graduate Institute of Agricultural Biotechnology, 250, Kuo-Kuang Road,, RL Taichung 40227, Taiwan XX RN [3] RC Sequence update by submitter RP 1-6451 RA Liao J.-T., Hsu Y.-H.; RT ; RL Submitted (22-AUG-2005) to the INSDC. RL Graduate Institute of Agricultural Biotechnology, 250, Kuo-Kuang Road,, RL Taichung 40227, Taiwan XX DR MD5; a29acc48dacf8e693782385f321bed45. DR EuropePMC; PMC5377869; 28466060. DR RFAM; RF00184; PVX_3. XX CC On Aug 24, 2005 this sequence version replaced gi:10048274. XX FH Key Location/Qualifiers FH FT source 1..6451 FT /organism="Potato virus X" FT /strain="Taiwan" FT /mol_type="genomic RNA" FT /db_xref="taxon:12183" FT CDS 85..4455 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="RdRp" FT /db_xref="GOA:Q400L3" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q400L3" FT /protein_id="AAZ82034.1" FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLANPYAQTV FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSILPQEPVTFMFLKPRKLNYM FT RRNPRIKDIFHNVAIEPRDVARYPKETIIDKLTEITTDTAYISDTLHFLDPSYIVETFQ FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFAHLQ FT WLKVGKIKWRDPKDGLLGHLNYTTEQVEMHTVTVQLQESFAANHLYCIRRGDLLTPEVR FT TFGQPDRYVIPPQIFLPKVHNCKKPILKKTMMQLFLYVRTVKVAKNCDIFAKVRQLIKS FT SDLDKYSAVELVYLVSYMEFLADLQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLFG FT LEDYAKLVKAVDFHPVDFSFKVETWDFRFHPLQAWKAFRPREVSDVEEMESLFSDGDLL FT DCFTRMPSYAVNAEEDLAAIRKTPEMDVGQEVKEPAGDRNQYSNPAETFLNKLHRKHSR FT EVKHQAVKKAKRLAEIQGSMRAEGEAESNEMSGGMGAIPSNAELPSTSDARQELTLPIT FT KPVPARWEDASSTDSSVEEEQVKLPGKEAVETATQQVIEGLPWKHWIPQLNAVGFKALE FT IQRDRSGTMIMPITEMVSGLEKEDFPEGTPKELARELLAMNRSPATIPLDLLRARDYGS FT DVKNKRIGAITKTQATSWGEYLTGKIESLNERKVATCVIHGAGGSGKSHAIQKALREIG FT KGSDITVVLPTNELRLDWSKKVPNTEPYMFKTYEKALIGGTGSIVIFDDYSKLPPGYIE FT ALICFYSKIKLVILTGDSRQSVYHETAEDASIRHLGPATEYFSKYCRYYLNATHRNKKD FT LANMLGVYSERTGVTEISMSAEFLEGIPTLVPSDEKRRLYMGTGRNDTFTYAGCQGLTK FT PKVQIVLDHNTQVCSTNVMYTALSRATDRIHFVNTSANSSAFWEKLDSTPYLKTFLSVV FT REQALKEYEPAEAEPIREPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHSNC FT VQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDIGDVLFLNYQKA FT MGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMS FT AWALNNWNFSRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI FT FLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKHSF FT HRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELKKC FT QDSYEIDLSYAYDHKDSLHDLFDEKQCQAHTLTCRTLIKSGRGTVSLPRLRNFL" FT CDS 4486..5166 FT /codon_start=1 FT /product="triple-gene-block protein 1" FT /note="TGBp1" FT /db_xref="GOA:Q9E2G9" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:Q9E2G9" FT /protein_id="AAG12333.2" FT /translation="MDILIISLKSLGYSRTSKSLDSGPLVVHAVAGAGKSTALRKLILR FT HPTFTVHTLGVPDKVSIRTRGIQKPGPIPEGNFAILDEYTLDNTTRNSYQALFADPYQA FT PEFSLEPHFYLETSFRVPRKVADLIASCGFDFETNSQEEGHLEITGIFKGPLLGKVIAI FT DEEAETTLSRHGVEFVKPCQVTGLEFKVVTIVSASPIEEIGQSTAFYNAITRSKGLTYV FT RAGT" FT CDS 5147..5494 FT /codon_start=1 FT /product="triple-gene-block protein 2" FT /note="TGBp2" FT /db_xref="GOA:Q77LU2" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q77LU2" FT /protein_id="AAG12334.2" FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALVSITFLLSRNSLPHVGDN FT IHSLPHGGAYRDGTKAILYNSPNLGSRVSLHNGKNAAFAAVLLLTLLIYGSKYISQRNH FT TYACGNNHSSH" FT CDS 5427..5639 FT /codon_start=1 FT /product="triple-gene-block protein 3" FT /note="TGBp3" FT /db_xref="GOA:Q77LU1" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q77LU1" FT /protein_id="AAG12335.2" FT /translation="MEVNTYLNAIILMLVVTIIAVISTSLVRTEPCVIKITGESITVLA FT RKLDAETIRAIADLKPLSVERLSFH" FT CDS 5650..6363 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:Q77LU0" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q77LU0" FT /protein_id="AAG12336.1" FT /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR FT AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI FT TGTTTAEAVVTLPPP" XX SQ Sequence 6451 BP; 1994 A; 1519 C; 1472 G; 1466 T; 0 other; gaaaactaaa ccatacacca ccaacacaac caaacccacc acgcccaatt gttacacacc 60 cgcttgaaaa agaaagtcta acaaatggcc aaagtgcgcg aggtttacca atcctttaca 120 gactccacca caaaaactct catccaagat gaggcttata gaaatattcg tcccatcatg 180 gaaaaacata aactagctaa cccgtacgct caaacggttg aagcggctaa tgatctagag 240 gggttcggca tagccaccaa tccctatagc attgaattgc atacacatgc agccgctaag 300 accatagaga ataaacttct agaggtgctt ggttccatcc taccacaaga acctgttaca 360 tttatgttcc ttaagcccag gaagctaaac tatatgagaa gaaacccgcg gattaaggac 420 attttccaca atgttgctat tgaaccaaga gacgtagcaa ggtaccccaa ggaaacaata 480 attgacaaac tcacagagat cacaacggac acagcatata ttagtgacac tctgcacttc 540 ctggatccaa gctacatagt ggagacattc cagaactgcc caaaactgca aacattgtat 600 gcgaccttag ttctccccgt tgaggcagcc ttcaaaatgg aaagcactca cccaaacata 660 tacagcctca aatacttcgg agatggtttc cagtatatac caggcaacca tggtggtgga 720 gcataccatc atgaatttgc tcatttacaa tggctcaaag tgggaaagat caagtggagg 780 gaccccaagg atggccttct cggacatctc aattacacga ctgagcaggt tgagatgcac 840 acagtgacag tgcagttgca ggaatcgttc gcggcaaacc atttgtactg catcagaaga 900 ggggacttgc tcacaccgga ggtgcgcact ttcggccaac ctgacaggta tgtgattcca 960 ccacagatct ttctcccgaa agttcacaac tgcaagaagc cgattcttaa gaaaactatg 1020 atgcagctct tcttgtatgt taggacagtc aaggtcgcaa aaaattgtga catttttgcc 1080 aaagtcagac aattaattaa atcatctgac ttggacaaat attctgccgt ggaactggtt 1140 tacctagtaa gctatatgga gttcctggct gatttacaag ctaccacctg cttctcagac 1200 acactttctg gtggcttgct aacaaagacc cttgcaccgg taagagcttg gatacaagag 1260 aaaaagatgc agctgtttgg tcttgaggac tacgcgaagt tagtcaaagc agttgatttc 1320 cacccggtgg atttctcttt taaagtggaa acttgggact tcagattcca ccccttgcaa 1380 gcgtggaaag ccttccgacc aagggaagtg tcggatgtag aggaaatgga gagtttgttc 1440 tcagatgggg acctgcttga ttgcttcaca agaatgccat cttacgcagt aaacgcagag 1500 gaagatttag ctgcaatcag gaaaacgcct gagatggatg tcggccaaga agttaaagaa 1560 cctgcaggag acaggaatca atactcaaac cctgcagaaa ctttcctcaa caagctccac 1620 aggaaacaca gtagggaggt gaaacatcag gccgtaaaga aagctaaacg cctagctgaa 1680 atccaggggt ccatgagagc tgaaggtgag gccgagtcaa atgagatgag cggaggcatg 1740 ggggcaatac ctagcaacgc cgaacttcct agcacgagtg atgcccgaca agaactcaca 1800 ctcccaatca ccaaacctgt ccctgcaagg tgggaagatg cttcatccac agattctagt 1860 gtggaagagg agcaggtgaa actccctgga aaagaagccg ttgagacagc aacacaacaa 1920 gttatcgaag gactcccttg gaaacactgg attcctcaac taaatgctgt tgggtttaag 1980 gcactggaaa ttcagaggga tagaagtgga acaatgatca tgcccatcac agaaatggtc 2040 tccgggttgg agaaagagga cttcccggaa ggaactccaa aagagttggc acgagaattg 2100 ctcgccatga acagaagccc tgccaccatc cctttggacc tgcttagagc cagagactac 2160 ggcagtgatg tgaagaataa gagaattggt gccatcacaa agacacaagc aacaagctgg 2220 ggcgagtacc taacaggaaa gatagagagc ctgaatgaga ggaaagttgc gacttgtgtc 2280 attcatggag ctggaggctc tggaaaaagt catgccattc agaaggcatt gagagaaatt 2340 ggcaagggct cagacatcac tgtagtcctg ccgaccaatg aactgcgact agattggagt 2400 aagaaggtgc ccaacactga accgtacatg ttcaagacct atgaaaaggc gttaattggg 2460 ggaacaggca gcatagtcat ctttgacgat tactcaaaac ttcctcccgg ttacatagaa 2520 gccttaatct gtttttactc caagatcaag ctagtcattc taacaggaga tagcagacag 2580 agcgtctacc atgaaactgc agaggacgcc tctatcaggc atttgggacc agcgacagag 2640 tacttctcaa aatactgccg atactatctc aatgctacac accgcaacaa gaaagacctt 2700 gcgaacatgc tcggtgtcta cagtgagagg acgggagtta ccgaaatcag catgagcgcc 2760 gagttcttag aaggaatccc aactttggta ccctcggatg aaaagagaag gctgtacatg 2820 ggtaccggga ggaatgacac gttcacatac gctggatgcc aggggctaac taagccgaaa 2880 gtacaaatag tgctggacca caacacccaa gtgtgtagca cgaatgtgat gtacacggca 2940 ctttctagag ccaccgacag gattcacttc gtgaacacaa gtgcaaactc ttcggccttt 3000 tgggaaaagt tagacagcac cccttatctc aagactttcc tatcagtggt gagagaacaa 3060 gcactcaagg agtacgagcc ggcagaggca gagccaattc gagagcctga gccccagaca 3120 cacatgtgtg tcgaaaatga ggagtccgtg ctagaagagt acaaagagga actcttggaa 3180 aagtttgaca gagagatcca ctctgaatcc catggccatt caaactgtgt ccaaactgaa 3240 gacacaacca ttcagttgtt ctcgcatcaa caagcaaaag atgagaccct cctctgggcg 3300 accatagatg cgcggctcaa gaccagcaat caagaaacaa acttccgaga attcttgagc 3360 aagaaggaca ttggggacgt tctgtttttg aactaccaaa aagctatggg tttgcccaaa 3420 gaacgtattc ctttttcaca agaggtctgg gaagcttgtg cccatgaagt acaaagcaag 3480 tacctcagta agtcgaagtg caacttgatc aatgggactg tgagacagag cccagacttt 3540 gatgaaaaca aaattatggt attcctcaag tcgcagtggg tcacaaaggt ggaaaaacta 3600 ggtctaccca agattaagcc aggtcaaacc atagcagctt tttatcagca gactgtgatg 3660 ctttttggaa ctatggctag gtacatgcga tggttcagac aggctttcca gccaaaagaa 3720 gtcttcataa actgtgagac cacgccagaa gacatgtctg catgggcctt gaacaactgg 3780 aatttcagta gacctagctt ggctaatgat tacacagcct tcgaccagtc tcaggatgga 3840 gctatgttgc aatttgaggt gctcaaagct aagcaccact gcataccaga ggaaattatc 3900 caagcataca tagacattaa gaccaatgca cagattttcc taggcacatt gtcaattatg 3960 cgcctgactg gtgaaggtcc cacctttgat gcaaacactg agtgcaacat agcttacacc 4020 catacaaagt ttgacatccc ggccggaact gctcaagttt atgcaggaga cgactcagca 4080 ctggactgcg ttccagaagt gaagcatagt ttccacaggc ttgaagacaa attactcctc 4140 aagtcgaagc ccgtaatcac gcaacaaaag aaaggcagtt ggcctgagtt ttgtggttgg 4200 ctgattacac caaaaggggt aatgaaagac ccaattaagc tccatgttag cttaaaattg 4260 gccgaagcta agggtgaact caagaaatgt caagattcct atgaaattga tctgagttat 4320 gcctatgacc acaaggactc tctacatgac ctgttcgatg agaaacagtg tcaggcacat 4380 acactcactt gcaggacact aatcaagtca gggagaggca ctgtctcact tccccgcctc 4440 agaaactttc tttaaccgtt aagttacctt atagatttga ataagatgga tattctcatc 4500 attagtttga aaagtttagg ttattctagg acttctaaat ctttagactc aggacctttg 4560 gtagtacatg cagtagccgg agccggtaag tccacagccc taaggaagtt gatcctcaga 4620 cacccaacat tcaccgtgca tacactcggg gtccctgaca aggtgagtat cagaactaga 4680 ggcatacaga agccaggacc tattcctgag ggcaatttcg caatcctcga tgagtatact 4740 ttggacaaca ccacaaggaa ctcataccag gcactttttg ctgaccctta tcaggcacct 4800 gagtttagcc tagagcccca cttttacttg gaaacatcat ttcgagttcc gaggaaagtg 4860 gcagatttga tagcaagctg tggcttcgat ttcgagacca actcacagga ggaagggcac 4920 ttagagatca ctggtatatt caaagggccc ctacttggga aggtgatagc cattgacgag 4980 gaggctgaga caacgctgtc caggcatggt gttgagtttg ttaagccctg ccaagtgact 5040 ggacttgaat tcaaagtagt cactattgtg tctgcctcac caatagagga aattggccag 5100 tccacagctt tctacaacgc catcaccagg tcaaagggat tgacatatgt ccgcgcaggg 5160 acatagactg accgctccgg tcaattctga aaaagtgtac atagtattag gtctatcatt 5220 tgctttagtt tcaattacct ttctgctttc tagaaatagt ttaccccacg tcggtgacaa 5280 cattcacagc ttaccacacg gaggagctta cagagacggc accaaagcaa tcttgtacaa 5340 ctccccaaat ttagggtcac gagtgagtct acacaacgga aagaacgcag catttgctgc 5400 cgttttgcta ctgactttgc tgatctatgg aagtaaatac atatctcaac gcaatcatac 5460 ttatgcttgt ggtaacaatc atagcagtca ttagtacttc cttagtgagg actgaacctt 5520 gtgtcatcaa gattactgga gaatcaatca cagtgttggc ccgcaaatta gacgcagaaa 5580 ctatcagagc cattgccgat ctcaagccac tctccgttga acggttaagt ttccattgat 5640 actcgaaaga tgtcagcacc agctagcaca acacaggcca cagggtcaac tacttcaact 5700 accacgaaaa ctgcaggcgc aactcctgcc acagcttcag gactgtttac catcccggat 5760 ggggatttct ttagtacagc ccgtgccata gtagccagca atgccgttgc aacaaatgag 5820 gacctcagta agattgaggc tatttggaag gacatgaagg tgcctacaga cactatggca 5880 caggctgctt gggacttagt cagacactgt gctgatgtgg gctcatctgc tcaaacagaa 5940 atgatagata caggtcccta ttccaacggc atcagcagag ctagactggc agcagcgatc 6000 aaagaggttt gcacacttag gcaattttgc atgaagtatg ccccagtggt atggaactgg 6060 atgttgacta acaacagtcc acctgctaac tggcaagcac aaggtttcaa gcctgagcac 6120 aaattcgctg cattcgactt ctttaatgga gtcactaacc cagctgccat catgcccaaa 6180 gaggggctca tccggccacc gtctgaagct gaaatgaatg ctgcccaaac tgctgccttt 6240 gtgaagatta cgaaggccag ggcacaatcc aacgactttg ccagcttaga tgcagctgtc 6300 actcgaggtc gtatcactgg aacaacaacc gctgaggctg ttgtcactct tccaccacca 6360 taactacgtc tacataaccg acgcctaccc cagtttcata gtattttctg gtttgattgt 6420 atgaataata taaataaaaa aaaaaaaaaa a 6451 //