ID AF271234; SV 1; circular; genomic DNA; STD; VRL; 2782 BP. XX AC AF271234; XX DT 28-DEC-2001 (Rel. 70, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Tomato yellow leaf curl Malaga virus isolate ES42199, complete genome. XX KW . XX OS Tomato yellow leaf curl Malaga virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2782 RX DOI; 10.1006/viro.2002.1633. RX PUBMED; 12490393. RA Monci F., Sanchez-Campos S., Navas-Castillo J., Moriones E.; RT "A natural recombinant between the geminiviruses Tomato yellow leaf curl RT Sardinia virus and Tomato yellow leaf curl virus exhibits a novel RT pathogenic phenotype and is becoming prevalent in Spanish populations"; RL Virology 303(2):317-326(2002). XX RN [2] RP 1-2782 RA Monci F., Sanchez-Campos S., Navas-Castillo J., Moriones E.; RT ; RL Submitted (22-MAY-2000) to the INSDC. RL Estacion Experimental La Mayora, CSIC, Algarrobo-Costa, Malaga 29750, Spain XX DR MD5; bb9a2631b9a6a2a85805405b159a411e. DR EuropePMC; PMC2224568; 17977971. DR EuropePMC; PMC6036239; 30013589. DR EuropePMC; PMC6362282; 30718735. XX FH Key Location/Qualifiers FH FT source 1..2782 FT /organism="Tomato yellow leaf curl Malaga virus" FT /isolate="ES42199" FT /mol_type="genomic DNA" FT /country="Spain" FT /note="TYLCV-Sar / TYLCV-Is recombinant" FT /db_xref="taxon:219744" FT CDS 149..496 FT /codon_start=1 FT /gene="V1" FT /product="precoat protein V1" FT /db_xref="GOA:Q8V6I2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8V6I2" FT /protein_id="AAL50344.1" FT /translation="MWDPLLNEFPDSVHGLRCMLAIKYLQLVEETYEPNTLGHDLIRDL FT ISVIRARDYAEANRRYTNFNARFEGSSKTELRQPVYQPCCCPHCPRHQASIMDLQAHVS FT KAADVQNVQKP" FT CDS 309..1082 FT /codon_start=1 FT /gene="V2" FT /product="coat protein V2" FT /db_xref="GOA:Q8V6I1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q8V6I1" FT /protein_id="AAL50345.1" FT /translation="MPKRTGDILISTPVSKVRRKLNFDSPYTSRAAAPTVQGIKRRSWT FT YRPMYRKPRMYRMYRSPDVPFGCEGPCKVQSYEQRDDVKHTGVVRCVSDVTRGSGITHR FT VGKRFCIKSIYILGKIWMDENIKKQNHTNQVIFFLVRDRRPYGTSPMDFGQVFNMFDNE FT PSTATVKNDLRDRYQVMRKFHATVVGGPSGMKEQCLLKRFFKVNTHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1079..1483) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:Q8V6I0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8V6I0" FT /protein_id="AAL50348.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRHQVLKYLDSIGVISINN FT VIRAVDHVLYDVLENTINVIEQHEIKYNLY" FT CDS complement(1224..1631) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:Q8V6H9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8V6H9" FT /protein_id="AAL50347.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRIDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPHLDDITASDWSFLKSI" FT CDS complement(1540..2619) FT /codon_start=1 FT /gene="C1" FT /product="replication associated protein C1" FT /db_xref="GOA:Q9YUX7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9YUX7" FT /protein_id="AAL50346.1" FT /translation="MAPPKRFQINCKNYFLTYPKCSLTKEEALSQLKNLETPTNKKYIK FT VCRELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYV FT DKDGDTVDWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALRIIKELIPKDYILQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENVVSSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPL FT FASINQGPTQDSQEETNKA" FT CDS complement(2160..2462) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8V6H8" FT /protein_id="AAL50349.1" FT /translation="MGNHISMCLSNLKGNSSAKISDSSTWYPQAGQHISIQTFRELNPV FT QMSSLMSIRTETPSTGVSFRSTDDLHVGVSSQPMTLTPQLLTQAVSQRLLESLKN" XX SQ Sequence 2782 BP; 767 A; 524 C; 616 G; 875 T; 0 other; taatattacc ggatggccgc gctccccgat aaagtagtgg gccctacgca gtaatttgtg 60 tcgaccaatg aaaatgcagc ctcaaagctt aaataatgta tttactttgt tataaacttg 120 gcttctaagt tttgaaaaaa ccatcaatat gtgggatcct ttattaaatg aatttccaga 180 ttcagttcat ggtctccgtt gtatgcttgc aataaaatat ttgcagctag ttgaagaaac 240 ctatgaaccc aatactctgg gtcatgatct aattagggat ctcatttccg tcattcgtgc 300 tcgtgactat gccgaagcga acaggcgata tactaatttc aacgcccgtt tcgaaggttc 360 gtcgaaaact gaacttcgac agcccgtata ccagccgtgc tgctgccccc actgtccaag 420 gcatcaagcg tcgatcatgg acttacaggc ccatgtatcg aaagccgcgg atgtacagaa 480 tgtacagaag ccctgatgtc ccctttggtt gtgaaggtcc ttgtaaagtc cagtcgtatg 540 agcagcgtga cgacgtcaag cataccggtg ttgttcgttg tgttagtgat gtaactaggg 600 gttctggtat tacacataga gtaggtaaac ggttttgtat taagtcaatc tatattttag 660 ggaagatttg gatggatgaa aatataaaaa aacaaaatca tactaaccag gtcatattct 720 ttttagtacg agaccgaagg ccgtatggaa ctagtcctat ggattttggt caagttttta 780 acatgtttga taatgaacct agtacggcta ctgtgaagaa cgatttaagg gataggtacc 840 aagtaatgag gaagttccat gccacggtgg taggtggtcc gtcagggatg aaggagcagt 900 gtctgttgaa gaggtttttt aaagttaata cccatgtagt ttataatcat caagagcagg 960 cgaagtatga aaaccatact gagaatgcgt tgttgttgta tatggcatgt actcatgctt 1020 ctaacccagt gtatgctacg ttgaaaatac gtatctattt ttatgatgct gtaacaaatt 1080 aataaagatt gtattttatt tcatgttgtt caattacatt tattgtgttt tcaagtacat 1140 catacaatac atgatcaact gctctgatta cattgttaat tgaaattaca ccaatactat 1200 ctaaatactt aagaacttga tgtctaaata ctcttaagaa acgaccagtc tgaggctgta 1260 atgtcgtcca gatgcggaag ttgagaaaac atttgtgaat ccccaatacc ttcctgatgt 1320 tgtggttgaa tcttatctga atggaaatga tgtcgtggtt cattagaaat ggcctctggc 1380 tgtgttctgt tatcttgaaa tagaggggat tgtttatctc ccagataaaa acgccattct 1440 ctgcctgagg agcagtgatg agttcccctg tgcgtgaatc catgattgtt gcagttgagg 1500 tggaggtagt atgagcagcc acagtctagg tctatacgct tacgccttat tggtttcttc 1560 ttggctatct tgtgttggac cttgattgat acttgcgaac agtggctcgt agagggtgac 1620 gaaggttgca ttcttgagag cccaattttt caaggatatg tttttttctt cgtctagata 1680 ttccctatat gaggaggtag gtcctggatt gcagaggaag atagtgggaa ttcccccttt 1740 aatttgaatg ggcttcccgt actttgtgtt gctttgccag tccctctggg cccccatgaa 1800 ttccttgaag tgctttaaat aatgcgggtc tacgtcatca atgacgttgt accatgcatc 1860 attactgtat acctttgggc ttaggtctag atgtccacat aaataattat gtgggcctag 1920 agacctggcc cacattgttt tgcctgttct gctatcaccc tcaatgacaa tactattagg 1980 tctccatggc cgcgcagcgg aagacacgac gttctcggac acccatactt caagttcatc 2040 tggaacttga ttaaaagatg aagataaaaa gggagaaata taaggagccg gaggctcctg 2100 aaaaattcta tctaaattac tatttaaatt atgaaattgt aaaatataat ctttcggtat 2160 taattcttta atgattctaa gagcctctga cttactgcct gagttaagag ctgcggcgta 2220 agcgtcattg gctgactgct gacccccacg tgcagatcgt ccgtcgatct gaaactcacc 2280 ccagtcgacg gtgtctccgt ccttatcgac ataagacttg acatctgaac tggatttagc 2340 tccctgaatg tttggatgga aatgtgctgc cctgcttggg gataccaggt cgaagaatcg 2400 ctgattttgg cacttgaatt tcccttcaaa ttggataagc acatggagat gtggttcccc 2460 attctcgtgg agttctctgc aaactttgat gtatttttta tttgttgggg tttctaggtt 2520 ttttaactgg gaaagtgctt cttctttcgt taaggagcac ttaggatatg tgaggaaata 2580 atttttgcaa tttatttgga agcgcttagg gggagccata tggtcaatga gtaccgattg 2640 accaagattt ttacacttat ccctggtgta tcggtactca atatatagtg agtaccaaat 2700 ggcatattgg taattttgta aaagtacaat gcaattcaaa attcaaaatt caaaaatcaa 2760 atcattaaag cggccatccg ta 2782 //