ID   AF271215; SV 1; linear; genomic RNA; STD; VRL; 2154 BP.
XX
AC   AF271215;
XX
DT   25-JAN-2001 (Rel. 66, Created)
DT   25-JAN-2001 (Rel. 66, Last updated, Version 1)
XX
DE   Potato leaf roll virus isolate CU87 coat protein and ORF IV genes, complete
DE   cds; and readthrough protein gene, partial cds.
XX
KW   .
XX
OS   Potato leafroll virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-2154
RX   PUBMED; 11125153.
RA   Rouze-Jouan J., Terradot L., Pasquer F., Tanguy S.,
RA   Giblot Ducray-Bourdin D.;
RT   "The passage of Potato leafroll virus through Myzus persicae gut membrane
RT   regulates transmission efficiency";
RL   J. Gen. Virol. 82(Pt 1):17-23(2001).
XX
RN   [2]
RP   1-2154
RA   Terradot L., Pasquer F., Bourdin D.;
RT   ;
RL   Submitted (22-MAY-2000) to the INSDC.
RL   UMR BiO3P, INRA, BP29, Le Rheu 35653, France
XX
DR   MD5; 668a8fe7d271a3d53d23c8186c450ea8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2154
FT                   /organism="Potato leafroll virus"
FT                   /isolate="CU87"
FT                   /mol_type="genomic RNA"
FT                   /note="highly aphid transmissible isolate"
FT                   /db_xref="taxon:12045"
FT   CDS             1..627
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="22 Kd major capsid protein; ORF III"
FT                   /db_xref="GOA:Q99GS3"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:Q99GS3"
FT                   /protein_id="AAG53600.1"
FT                   /translation="MSTVVVKSNVNGGVQHPRRRRRQPLRRRANRVQPVVMVTAPGQPR
FT                   RRRRRRGGNRRSRRIGVPRGRGSSETFVFTKDNLMGNSQGSFTFGPSLSDCPAFKDGIL
FT                   KAYHEYKITSILLQFVSEASSTSSGSIAYELDPHCKVSSLQSYVNKFQITKGGAKTYQA
FT                   RMINGVEWHDSSEDQCRILWKGNGKSSDTAGSFRVTIRVALQNPK"
FT   CDS             26..496
FT                   /codon_start=1
FT                   /product="ORF IV"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:Q99GS2"
FT                   /protein_id="AAG53602.1"
FT                   /translation="MSMVVYNTQEGEEGNPFAGALTEFSQWLWSRPLGNPGAEDVEEEA
FT                   IAAQEELEFPEDEAQARHSCLQRTTSWATPKEVSPSGQVYQTVRHSRMEYSRPTMSIRS
FT                   QASYFSSSARPLPPPPAPSLMSWTPIAKYHPSSPTSTSSKLRRAAPKLIKRG"
FT   CDS             <628..2154
FT                   /codon_start=1
FT                   /product="readthrough protein"
FT                   /note="ORF V; start codon unknown"
FT                   /db_xref="GOA:Q99GS1"
FT                   /db_xref="InterPro:IPR002929"
FT                   /db_xref="UniProtKB/TrEMBL:Q99GS1"
FT                   /protein_id="AAG53601.1"
FT                   /translation="VDSRSEPGPSPQPTPTPTPQKHERFIAYVGIPMLTIQARENDDQI
FT                   ILGSLGNQRMKYIEDENQNYTNVSSEYYSQSSMQAVPMYYFNVPKGQWSVDISCEGYQP
FT                   TSSTSDPNRGRSDGMIAYSNADSDYWNVGEADGVKISKLRNDNTYRQGHPELEINSCHF
FT                   REGQLLERDATISFHVEAPTDGRFFLVGPAIQKTAKYNYTISYGDWTDRDMELGLITVV
FT                   LDEHLEGSGSANRVRRPPREGHTYMASPREPEGKPVENKPRDETPIQTQERQPDQTPSD
FT                   DVSDAGSVNSGGSTESLRLEFGVNSDNTYDATVDGTDWPRIPPPRHPPEPRVSGNSRTV
FT                   TDFSTKADLLENWDAEHFDPGYSKEDVAAATIIAHVSIQDGRSMLEKREENIKNKTSSW
FT                   KPPLPKAVSPAIAKLRSIRKSQPLEGGTLKKDATDGVSSIGSGSLTGGTLKRKATIEER
FT                   LLQTLTTEQRLWYENLKKTNPLAATQWLFEYQPPPQVDRNLAEKPFQGRK"
XX
SQ   Sequence 2154 BP; 633 A; 546 C; 526 G; 449 T; 0 other;
     atgagtacgg tcgtggttaa aagcaatgtc aatggtggtg tacaacaccc aagaaggcga        60
     agaaggcaac cccttcgcag gcgcgctaac agagttcagc cagtggttat ggtcacggcc       120
     cctgggcaac ccaggcgccg aagacgtaga agaggaggca atcgccgctc aagaagaatt       180
     ggagttcccc gaggacgagg ctcaagcgag acattcgtgt ttacaaagga caacctcatg       240
     ggcaactccc aaggaagttt caccttcggg ccaagtctat cagactgtcc ggcattcaag       300
     gatggaatac tcaaggccta ccatgagtat aagatcacaa gcatcttact tcagttcgtc       360
     agcgaggcct cttccacctc ctccggctcc atcgcttatg agttggaccc ccattgcaaa       420
     gtatcatccc tccagtccta cgtcaacaag ttccaaatta cgaagggcgg cgccaaaact       480
     tatcaagcgc ggatgataaa cggggtagaa tggcacgatt cttctgagga tcagtgccgg       540
     atactgtgga aaggaaatgg aaaatcctca gacaccgcag gatccttcag agtcaccatc       600
     agggtggctt tgcaaaaccc caaataggta gactccagat cagagcctgg tccaagccca       660
     caaccaacac ctactccaac tccccagaag cacgagcgat ttattgctta cgttggcata       720
     cctatgctaa ccattcaggc cagggagaac gacgaccaaa tcatattggg ttccttaggg       780
     aaccaaagga tgaaatatat agaggacgag aaccagaact acacaaatgt tagttctgag       840
     tattactctc aatcgagtat gcaagccgtc cctatgtatt actttaatgt cccgaaaggg       900
     caatggtcag tcgacatcag ctgcgaaggg tatcaaccca ctagcagcac ctcggatcca       960
     aaccggggta ggagtgacgg gatgatcgcg tattcaaacg cggattccga ttattggaat      1020
     gttggtgaag cagatggtgt caaaatttcg aagctacgca acgataacac ctaccgccaa      1080
     ggtcacccag aacttgaaat taactcgtgt cattttcgcg agggccaact ccttgaacgg      1140
     gatgctacaa ttagcttcca cgttgaagcg cctactgatg ggcgattctt tctcgttggt      1200
     cccgctatcc agaaaaccgc aaagtataac tatactatct catacggtga ctggacggac      1260
     cgagacatgg aactggggct gatcaccgtg gtgcttgatg aacatttaga aggctctggt      1320
     tcggctaaca gagtgcggcg gcccccacgg gagggccaca cctatatggc ttcgccgcgc      1380
     gaaccggaag gaaaaccggt tgaaaataaa ccaagggacg aaaccccgat acaaacgcag      1440
     gaaagacaac ctgatcaaac tccgtctgac gacgtatccg atgctggttc ggtaaacagc      1500
     ggcggctcaa ctgagtcgct gcgattggag ttcggggtaa actcagataa tacctacgat      1560
     gctacagtcg atggtacaga ctggcccaga attcctccac caaggcaccc acctgaacct      1620
     agagtttccg gcaattcaag aactgttact gacttttcta cgaaagccga tctattagag      1680
     aattgggatg ccgaacactt cgaccctggt tattccaaag aagatgtcgc tgctgctacc      1740
     attatagcgc acgtcagtat tcaagatggg cgaagtatgt tagagaagag agaggaaaat      1800
     atcaagaaca aaacctcttc ctggaagccc ccgctaccta aagcggtgag cccagccata      1860
     gccaaattgc gctcgattcg caaatcccaa cccctcgagg gagggaccct taagaaagac      1920
     gccactgatg gtgtctcatc tattggcagt ggttctctaa caggtggcac gcttaagagg      1980
     aaggcaacta ttgaagagcg tttactgcag accttaacaa ctgaacaaag gctgtggtac      2040
     gagaatttga agaaaactaa ccctctagct gctacccaat ggctatttga atatcagcca      2100
     cctccccaag tagatagaaa tttagctgaa aagccattcc aagggaggaa atga            2154
//