ID   AF271214; SV 1; linear; genomic RNA; STD; VRL; 2154 BP.
XX
AC   AF271214;
XX
DT   25-JAN-2001 (Rel. 66, Created)
DT   25-JAN-2001 (Rel. 66, Last updated, Version 1)
XX
DE   Potato leaf roll virus isolate 14.2 coat protein and ORF IV genes, complete
DE   cds; and readthrough protein gene, partial cds.
XX
KW   .
XX
OS   Potato leafroll virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-2154
RX   PUBMED; 11125153.
RA   Rouze-Jouan J., Terradot L., Pasquer F., Tanguy S.,
RA   Giblot Ducray-Bourdin D.;
RT   "The passage of Potato leafroll virus through Myzus persicae gut membrane
RT   regulates transmission efficiency";
RL   J. Gen. Virol. 82(Pt 1):17-23(2001).
XX
RN   [2]
RP   1-2154
RA   Terradot L., Pasquer F., Bourdin D.;
RT   ;
RL   Submitted (22-MAY-2000) to the INSDC.
RL   UMR BiO3P, INRA, BP29, Le Rheu 35653, France
XX
DR   MD5; b856b8ed77a062d53d0569a19a24039a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2154
FT                   /organism="Potato leafroll virus"
FT                   /isolate="14.2"
FT                   /mol_type="genomic RNA"
FT                   /note="poorly aphid transmissible isolate"
FT                   /db_xref="taxon:12045"
FT   CDS             1..627
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="22 Kd major capsid protein; ORF III"
FT                   /db_xref="GOA:Q99GS6"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q99GS6"
FT                   /protein_id="AAG53597.1"
FT                   /translation="MSTVVVKGNVNGGAHQPRRRRRQSLRRRANRVQPVVMVTAPGQPR
FT                   RRRRRRGGNRRSRRTGVPRGRGSSETFVFTKDNLMGNSQGSFTFGPSLSDCPAFKDGIL
FT                   KAYHEYKITSILLQFVSEASSTSSGSIAYELDPHCKVSSLQSYVNKFQITKGGAKIYQA
FT                   RMINGVEWHDSSEDQCRILWKGNGKSSDTAGSFRVTIRVALQNPK"
FT   CDS             26..496
FT                   /codon_start=1
FT                   /product="ORF IV"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:Q99GS5"
FT                   /protein_id="AAG53599.1"
FT                   /translation="MSMVVHTNQEGEEGNPFAGALTEFSQWLWSRPLGNPGAEDAEEEA
FT                   IAAQEELEFPEDEAQARHSCLQRTTSWATPKEVSPSGRVYQTVRHSRMEYSRPTMSIRS
FT                   QASYFSSSARPLPPPPVPSLMSWTPIAKYHPSSPTSTSSKLRRAAPKFIKRG"
FT   CDS             <628..2154
FT                   /codon_start=1
FT                   /product="readthrough protein"
FT                   /note="ORF V; start codon unknown"
FT                   /db_xref="GOA:Q99GS4"
FT                   /db_xref="InterPro:IPR002929"
FT                   /db_xref="UniProtKB/TrEMBL:Q99GS4"
FT                   /protein_id="AAG53598.1"
FT                   /translation="VDSGSEPGPSPQPTPTPTPQKHERFIAYVGIPMLTIQARENDDQI
FT                   ILGSLGNQRMKYIEDENRSYTNVSSEYYSQSSMQAVPMYYFNVPKGQWSVDISCEGYQP
FT                   TSSTSDPNRGRSDGMIAYSNADSDYWNVGEADGVKISKLRNDNTYRQGHPELEINSCHF
FT                   REGQLLERDATISLHVEAPTDGRFFLVGPAVQKTAKYNYTISYGDWTDRDMELGLITVV
FT                   LDEHLEGTDSANRVRRPPREGHTYMASPREPEGKPVGNKPRDETPIQTQERQPDQTPSD
FT                   DVSDAGSVNSGGSTESLRLEFGVNSDSTYDATVDGTDWPRIPPPRHPPEPRVSGNSRTV
FT                   TDFSPETDLLENWDAKHFDPGYSKEDVAAATIIAHGSIQDGRSMLEKREENVKNKTSSW
FT                   KPPLSKAVSPAIAKLRSIRKSQPLEGGTLNKDATDGVSSIGSGSLTGGTLKRKVTIEDR
FT                   LLQTLTTEQRLWFENLKKTNPPAATQWLYEYQPPPQVDRNIAEKPFQGRK"
XX
SQ   Sequence 2154 BP; 623 A; 548 C; 538 G; 445 T; 0 other;
     atgagtacgg tcgtggttaa aggaaatgtc aatggtggtg cacaccaacc aagaaggcga        60
     agaaggcaat cccttcgcag gcgcgctaac agagttcagc cagtggttat ggtcacggcc       120
     cctgggcaac ccaggcgccg aagacgcaga agaggaggca atcgccgctc aagaagaact       180
     ggagttcccc gaggacgagg ctcaagcgag acattcgtgt ttacaaagga caacctcatg       240
     ggcaactccc aaggaagttt caccttcggg ccgagtctat cagactgtcc ggcattcaag       300
     gatggaatac tcaaggccta ccatgagtat aagatcacaa gcatcttact tcagttcgtc       360
     agcgaggcct cttccacctc ctccggttcc atcgcttatg agttggaccc ccattgcaaa       420
     gtatcatccc tccagtccta cgtcaacaag ttccaaatta cgaagggcgg cgccaaaatt       480
     tatcaagcgc ggatgataaa cggggtagaa tggcacgatt cttctgagga tcagtgccgg       540
     atactgtgga agggaaatgg aaaatcttca gataccgcag gatccttcag agtcaccatt       600
     agggtggctt tgcaaaaccc caaataggta gactccggat cagagcctgg tccaagccca       660
     caaccaacac ccactccaac tccccagaag cacgagcgat ttattgctta cgttggcata       720
     cctatgctaa ccattcaggc cagggagaac gacgaccaaa tcatattggg ttccttaggg       780
     aaccaaagga tgaaatatat agaggacgag aaccggagct atacaaatgt tagctctgag       840
     tattactctc aatcgagcat gcaagccgtc cctatgtatt acttcaatgt cccgaaaggg       900
     caatggtcag tcgacatcag ctgtgaaggg tatcaaccca ctagcagcac ctcggatcca       960
     aaccggggta ggagtgacgg gatgatcgcg tattcaaacg cggactccga ttattggaat      1020
     gttggtgaag cggatggtgt aaaaatttcg aagctacgca acgataacac ctaccgccaa      1080
     ggtcacccag aacttgaaat taactcgtgt cattttcgcg agggccaact ccttgaacgg      1140
     gacgctacaa ttagccttca cgttgaagcg cccactgatg ggcgattctt cctcgttggt      1200
     cccgctgtcc agaaaaccgc aaagtataac tatactatct catacggtga ctggacggac      1260
     cgagacatgg aactggggct gatcaccgtg gtgcttgatg agcatttaga aggcactgat      1320
     tcggctaaca gagtgcggcg gcccccacgg gagggccaca cctatatggc ctcgccgcgc      1380
     gaaccggaag gaaaaccggt tggaaataaa ccaagggacg aaaccccgat acaaacgcag      1440
     gaaagacaac ctgatcaaac tccgtctgac gacgtatccg atgctggttc ggtaaacagc      1500
     ggcggctcaa ctgagtcgct gcgattggag ttcggggtaa actcagatag tacctacgat      1560
     gctacagtcg atggtacaga ctggcccaga attcctccac caaggcaccc acctgaacct      1620
     agagtttccg gcaattcaag aactgttact gacttttctc cggaaaccga cctattggag      1680
     aattgggatg ccaaacactt cgaccctggt tattccaaag aagatgtcgc tgctgctact      1740
     attatagcgc acggcagtat tcaagatggg cgaagtatgt tggagaagag agaggaaaat      1800
     gtcaagaaca aaacctcctc ctggaagccc ccgttatcta aagcggtgag cccagccata      1860
     gccaaattgc gctcgattcg caaatcccaa cctctcgagg gagggaccct taataaagac      1920
     gccactgatg gtgtctcatc tattggcagt ggttctctaa caggtggcac gctcaagagg      1980
     aaggtaacta ttgaagatcg tttactgcag accttaacaa ctgaacaaag gctgtggttc      2040
     gagaatttga agaaaactaa ccctccagct gctacccaat ggctgtatga atatcagcca      2100
     cctccccaag tagatagaaa catagctgaa aagccatttc aagggaggaa atga            2154
//