Dbfetch
ID AF268598; SV 1; linear; genomic RNA; STD; VRL; 2205 BP. XX AC AF268598; XX DT 14-MAY-2001 (Rel. 67, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Cucumber mosaic virus isolate Xb segment RNA3, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-2205 RA Wang H., Xie L., Lin Q.; RT "Construction of cDNA clone and nucleotide sequence of RNA3 of cucumber RT mosaic virus isolate Xb (CMV-Xb) from banana"; RL Unpublished. XX RN [2] RP 1-2205 RA Wang H., Xie L., Lin Q.; RT ; RL Submitted (17-MAY-2000) to the INSDC. RL Plant Protection, Plant Virology, Fujian Agricultural University, Fuzhou, RL Fujian 350002, China XX DR MD5; a2c59b14d7bdd8d51389e10cbda3ca29. DR EuropePMC; PMC3550734; 23637513. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..2205 FT /organism="Cucumber mosaic virus" FT /segment="RNA3" FT /isolate="Xb" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12305" FT CDS 97..936 FT /codon_start=1 FT /product="3a protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:Q91TW4" FT /protein_id="AAK52424.1" FT /translation="MAFQGTSRTLTQQSSAASSDDLQKILFSPDAIKKMATECDLGRHH FT WMRADNAISVRPLVPQVTSNNLLSFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE FT GSLKIYLADLGDKELSPIDGQCVTLHNHDLPALISFQPTYDCPMELVGNRHRCFAVVVE FT RHGYIGYGGTTASVCSNWQAQFSSKNNNYTHAAAGKTLVLPYNRLAEHSKPSAVARLLK FT SQLNNVSSSRYLLPNVALNQNASGHESEILNESPPIAIGSPSASRNNSFRSQVVNGL" FT CDS 1225..1881 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q91TW3" FT /db_xref="InterPro:IPR000247" FT /db_xref="InterPro:IPR023800" FT /db_xref="InterPro:IPR037137" FT /db_xref="UniProtKB/TrEMBL:Q91TW3" FT /protein_id="AAK52425.1" FT /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLRLNKT FT LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLV FT SRIQIRINPLPKFDSTVWATVRKVPSSSDLSVAAISAMFGDGNSPVLVYQYAASGVQAN FT NKLLYDLTEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT" XX SQ Sequence 2205 BP; 506 A; 517 C; 519 G; 663 T; 0 other; gtaatcttac cactttcttt tcacgtcgtg tcgcgtcagt ccacgctgtg tgtgtgtgtg 60 tgttagttag tgtgtcgtgt ttagattacg aaggttatgg ctttccaagg taccagtagg 120 actttaactc aacagtcctc ggcggcgtcg tctgacgact tacagaagat attatttagc 180 cccgatgcca tcaagaagat ggctactgag tgtgacctag gtcgacatca ttggatgcgc 240 gcggataacg ccatctctgt cagacctctc gttccccaag taaccagtaa caatttattg 300 tctttcttta aatctgggta tgatgccggt gaattgcgct ctaaaggcta tatgagcgtt 360 cctcaagtgc tgtgtgccgt taccaggacg gtttctacgg atgctgaggg ttctttgaaa 420 atttatttgg ctgacctagg tgataaagaa ttatccccaa ttgatgggca atgtgttact 480 ttacataatc atgatcttcc tgctttgata tctttccaac ctacctacga ttgccccatg 540 gaattagttg gcaatcggca tcgatgtttt gcggtagtcg ttgagagaca tggttatatt 600 ggttacggtg gtaccactgc tagcgtgtgt agtaactggc aagctcagtt ttcttcaaag 660 aataataatt acacacacgc cgctgctggt aagactcttg tgttgcctta caacagatta 720 gctgagcatt cgaaaccgtc agccgtcgct cgcctgttga agtcgcagtt aaacaacgtt 780 agctcatcgc gctatctttt gccgaacgtt gctcttaacc aaaatgcgtc tgggcacgag 840 tccgagattt taaacgaaag ccctcccatc gctataggga gtccgtccgc gtcccgtaac 900 aatagcttca gatcgcaggt ggttaacggt ctttagtgtt ttgttacgtt gtacctatgt 960 atatatatac tacgtttatc ttccgtatgt aaatacatgt gagtctagag tcccgtgtga 1020 gttgtaacgg tagacatctg tgacgcgaag ccgcctgaag atttcccatc tggggttagt 1080 aagtccacat cacagtttta aggttcaatt ccttttgctc cctgttgggc cccttacttt 1140 ctcatggatg cttctccgcg agttagcgtt tagttgttta cttgagtcgt gcgttttctt 1200 tgtgttttgc gtcttagtgt attcatggac aaatctggat ctcccaatgc tagtagaacc 1260 tcccggcgtc gtcgcccgcg tagaggttct cggtccgctt ctggtgcgga tgcagggttg 1320 cgtgctttga ctcagcagat gctgagactc aataaaaccc tcgccattgg tcgtcccact 1380 cttaaccacc caaccttcgt gggtagtgaa agctgtaaac ccggttacac tttcacatct 1440 attaccctga aaccgcctga aattgaaaag ggttcatact ttggtagaag gttgtctttg 1500 ccagattcag tcacggacta tgataagaag cttgtttcgc gcattcaaat caggattaat 1560 cctttgccga aatttgattc taccgtgtgg gccacagttc ggaaagtacc ttcatcatcc 1620 gatctttccg tcgccgccat ctctgctatg tttggcgatg gtaactcacc ggttttggtt 1680 tatcagtatg ctgcatccgg agttcaggcc aacaataagt tactttatga cctgaccgag 1740 atgcgcgctg atatcggcga catgcgtaag tacgccgtcc tggtctactc gaaagacgat 1800 aaactagaga aggacgagat tgtacttcat gtcgacgtcg agcatcaacg aattcctatc 1860 tcacggatgc tcccgactta gtccgtgtgt ttaccggcgt ccgaagacgt taaactacac 1920 tctcaatcgc gagtgctgag ttggtagtat tgcttcaaac tgcctgaagt ctctaaacgt 1980 gttgttgcac ggggaacggg ttgtccatcc agcttacggc taaaatggtc agtcatgcat 2040 caaatgcatg ccgacacctt acaaggttgt cgaggtaccc ttgaaatcat ctcctagatt 2100 tcttcggaag ggcttcgtga gaagctcgtg cacggtaata cactgatatt accaagagtg 2160 cgggtatcgc ctgtggtttt ccacaggttc tccataagga gacca 2205 //