ID AF264063; SV 1; linear; genomic DNA; STD; VRL; 2745 BP. XX AC AF264063; XX DT 08-JUN-2001 (Rel. 68, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Tomato leaf curl virus - Vietnam DNA A, complete sequence. XX KW . XX OS Tomato leaf curl Vietnam virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2745 RA Tsai W.S., Hong L.T.A., Green S.K.; RT "Completed sequence of Vietnam tomato leaf curl geminivirus"; RL Unpublished. XX RN [2] RP 1-2745 RA Tsai W.S., Hong L.T.A., Green S.K.; RT ; RL Submitted (05-MAY-2000) to the INSDC. RL Plant pathology-Virology, Asian Vegetable Research and Development Center, RL P. O. Box 42, Shanhua, Tainan, Taiwan, Republic of China XX DR MD5; bdf931ea2e88a36b83bb2ac0e410bbe8. DR EuropePMC; PMC2816314; 20104645. DR EuropePMC; PMC3126389; 21378048. XX FH Key Location/Qualifiers FH FT source 1..2745 FT /organism="Tomato leaf curl Vietnam virus" FT /segment="DNA A" FT /mol_type="genomic DNA" FT /country="Viet Nam:Co Nhue-Tu Liem-Hanol" FT /note="isolated May 28, 1998" FT /db_xref="taxon:208177" FT CDS 131..481 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:Q91P88" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q91P88" FT /protein_id="AAK58526.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEASRRYSHFHSRIQGSSPAELRQPVYQPCCCPHCPRHKQKEVMGESAHV FT PQAQDVQNVQKP" FT CDS 291..1064 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q91P87" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q91P87" FT /protein_id="AAK58527.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYTNRAVAPTVLVTNKRRSW FT VNRPMYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH FT RVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT CDS complement(1061..1465) FT /codon_start=1 FT /gene="C3" FT /product="C3" FT /db_xref="GOA:Q91P86" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q91P86" FT /protein_id="AAK58528.1" FT /translation="MDSRTGELITATQAENGVFTWEITNPLYFKITELQNRPFLSDNDI FT VTVRIQFNYNPRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLNNLGVISLNN FT VIRAVNYVLWDALTQTTFVNSSHVIKFNLY" FT CDS complement(1206..1613) FT /codon_start=1 FT /gene="C2" FT /product="C2" FT /db_xref="GOA:Q91P85" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q91P85" FT /protein_id="AAK58529.1" FT /translation="MQSSSASPSHCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSAL FT NCANHGFTHRGTHHCNSGREWRFYLGDNKSPVFQDNGTTKQALPIGQRHSDGQDPIQLQ FT PEESTGDAPMFSGLPDMDELTPSDWSFLKSI" FT CDS complement(1513..2601) FT /codon_start=1 FT /gene="C1" FT /product="Rep protein" FT /note="replication-associated protein" FT /db_xref="GOA:Q91P84" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q91P84" FT /protein_id="AAK58530.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQLKNLETPVNKLFIR FT ICREFHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQAAKSSTDVKAYM FT DKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEYLDEEKNTALKSWAIKNAVFVSITEPL FT YSSTYQSPAQDSEEENNQETED" FT CDS complement(2151..2444) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q91P83" FT /protein_id="AAK58531.1" FT /translation="MELLTCMFSSNSKGNSNVKTKDSSISHPQAGQHISIRTFRQLKAQ FT QMSKPIWTKTETCLIMEFSRSMEDRLEEVASLQTTHMPRQSIRGPKHRPSIY" XX SQ Sequence 2745 BP; 730 A; 562 C; 609 G; 844 T; 0 other; accggatggc cgcgattttt ttcatgtggt cccccccact attatttgtc ggccaataca 60 gacgctccct cagagcttat ttatgtaacg gttccctata aaacttggtc cccaagtacg 120 cattccaaac atgtgggatc cgcttttaaa cgagttcccc gaaaccgttc acggttttag 180 gtgtatgcta gcgattaaat atttgcaatt agtagaaaat acatactctc ccgatacatt 240 agggtacgat ttaatacgtg atttaatttt agtcattcgt gccagggatt atgtcgaagc 300 gtcccgcaga tatagtcatt tccactcccg catccaaggt tcgtcgccgg ctgaacttcg 360 acagcccgta taccaaccgt gctgttgccc ccactgtcct cgtcacaaac aaaaggaggt 420 catgggtgaa tcggcccatg taccgcaagc ccaagatgta cagaatgtac aaaagccctg 480 atgttccacg aggatgtgaa ggcccatgta aagtccagtc ttatgaacag cgtcatgatg 540 tagcccatgt agggaaggta atttgtgtgt ctgatgttac acgtggtaac gggttgactc 600 atcgtgttgg gaagaggttc tgtattaagt cagtttatgt tttgggtaag atctggatgg 660 atgagaacat taagacgaag aatcatacca atactgtcat gttcttttta gtacgtgata 720 gaagaccttt tggaactccc caagattttg gtcaggtgtt taacatgtat gataacgagc 780 caagtacagc cacggtgaag aacgataaca gagatcgttt tcaagttctt cgtcgatttc 840 aggcaactgt tactggtggt cagtatgcaa gcaaggagca agcaatagtt aggaagttta 900 tgaaggtgaa caaccatgtg acgtataatc atcaagaggc tgcgaagtat gataaccaca 960 cagagaatgc tctgttattg tatatggcat gtactcatgc tagtaatcca gtgtatgcta 1020 ctttaaaaat caggatctat ttctatgatt ctgttcagaa ttaataaaga ttaaatttta 1080 ttacatgaga actgtttaca aatgttgttt gcgttaatgc gtcccataat acataattta 1140 ctgctctaat tacattattc aaactaatta cacccaaatt attgagaaat ttcaaaactt 1200 gtgtcctaaa tactcttaag aaacgaccag tctgaaggtg tgagttcgtc catatccgga 1260 agtccagaaa acattggtgc atccccagtg ctttcctcgg gttgtagttg aattggatcc 1320 tgaccgtcac tatgtcgttg tccgatagga agggcctgtt ttgtagttcc gttatcttga 1380 aatacagggg atttgttatc tcccaagtaa aaacgccatt ctctgcctga gttgcagtga 1440 tgagttcccc tgtgcgtgaa tccatggttg gcgcagttaa gtgcgctgaa ataagaacaa 1500 ccacagggaa ggtcaatcct ccgtctcctg gttattttct tcttcgctat cctgtgctgg 1560 actttgatag gtacttgagt acagtggctc ggtgatgctg acgaagactg cattctttat 1620 tgcccacgac tttaatgcag tattcttttc ttcgtctagg tattctttat agcttgagtt 1680 gggccctgga ttgcacagga agatagctgg aatgccacct ttaatttgaa ctggttttcc 1740 gtactttgtg ttgctttgcc agtccctttg ggcccccatg aattctttaa aatgctttag 1800 gtagtgcgga tcaacgtcat cgatgacgtt gaaccaagca tcattactgt acacctttgg 1860 gctcaaatca agatgaccac acagataatt gtgtggaccc aatgatcgag cccacatcgt 1920 cttccccgtc ctgctatcac cctctatgac tatacttatt ggtcgtaatg gccgcgcagc 1980 ggaactgacg acgttctctg cagcccactc ttcgagttcc tctgggactc gatcaaacga 2040 agaagaagaa aaaggcgaaa cgtaaacctc cattggagga gtaaaaattc tatctaaatt 2100 actatttaaa ttatggaatt gtaaaacaaa atctttggga gctttctccc ttaatatatt 2160 gagggccgat gctttggacc ccgaattgat tgcctcggca tatgcgtcgt ttgcagactg 2220 gcaacctcct ctagccgatc ttccatcgat ctggaaaact ccatgatcaa gcacgtctcc 2280 gtctttgtcc atataggctt tgacatctgt tgagctttta gctgcctgaa tgttcggatg 2340 gaaatgtgct gacctgcttg gggatgtgag atcgaagaat ctttggtttt tacattggaa 2400 tttcccttcg aattggatga gaacatgcag gtgaggagtt ccatcttcgt ggaattctct 2460 gcagatgcgg ataaatagtt tatttactgg ggtttctagg tttttaagtt gggaaagtgc 2520 ttcttcttta gtgagagagc agtgtggata tgtgaggaaa taatttttgg catttattct 2580 gaatttatta ggaggagcca ttgactggtc aatcggtgtc tcttaaactt ggctatgcaa 2640 ttggtgtctg gtgtcttatt tatatgtgga caccaaatgg cattatcgta attcccaaaa 2700 gaaattcaaa attcaaattg gtaaagcggc catccgtata atatt 2745 //