ID AF260511; SV 1; linear; genomic RNA; STD; VRL; 3949 BP. XX AC AF260511; XX DT 07-SEP-2000 (Rel. 65, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Grass carp reovirus segment 1, complete sequence. XX KW . XX OS Grass carp reovirus OC Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Aquareovirus. XX RN [1] RP 1-3949 RX DOI; 10.1006/bbrc.2000.3215. RX PUBMED; 10924351. RA Fang Q., Attoui H., Cantaloube J.F., Biagini P., Zhu Z., de Micco P., RA de Lamballerie X.; RT "Sequence of genome segments 1, 2, and 3 of the grass carp reovirus (Genus RT Aquareovirus, family Reoviridae)"; RL Biochem. Biophys. Res. Commun. 274(3):762-766(2000). XX RN [2] RP 1-3949 RA Fang Q., Attoui H., Cantaloube J.F., Biagini P., Zhu Z., de Micco P., RA de Lamballerie X.; RT ; RL Submitted (26-APR-2000) to the INSDC. RL Unite des virus emergents, Faculte de medecine de Marseille, 27-boulevard RL Jean Moulin, Marseille 13005, France XX DR MD5; 2c66122e761e87b18a062185db0bf514. DR EuropePMC; PMC4418822; 25938226. XX FH Key Location/Qualifiers FH FT source 1..3949 FT /organism="Grass carp reovirus" FT /segment="1" FT /mol_type="genomic RNA" FT /db_xref="taxon:128987" FT CDS 13..3912 FT /codon_start=1 FT /product="VP1" FT /note="putative guanylyl/methyl transferase" FT /db_xref="GOA:Q9E3W0" FT /db_xref="InterPro:IPR010311" FT /db_xref="InterPro:IPR029063" FT /db_xref="PDB:3IYL" FT /db_xref="PDB:3K1Q" FT /db_xref="UniProtKB/TrEMBL:Q9E3W0" FT /protein_id="AAG10435.1" FT /translation="MAAVFGIQLVPKLNTSTTRRTFLPLRFDLLLDRLQSTNLHGVLYR FT ALDFNPVDRSATVIQTYPPLNAWSPHHAFIENPLDYRDWTEFIHDRALAFVGVLTQRYP FT LTQNAQRYTNPLVLGAAFGDFLNARSIDIFLDRLFYDPTQDSPITAITKFPYQWTIDSN FT VTTDSVRTSAGCKYITLYGYDPSRPSTPATYGKHRPTYATVFYYSTLPARSRLLANLAA FT GPTVLEHFDSPTYGPHLLLPQTGDVLGYSSSLISQAALLMVESVMDALRDNANASASTA FT VTRLDQSYHPVTSFDPSTFNTLLQRATNLALLAVQGVQSESAIPAIPTMSDVRSFVARL FT MAEGDPQQWFPYRVDQILYWPESPFVPPIGPFYAPFRPVNFPFTTGSYTVVPDASRPLR FT LLPQYRNATITVQQADDAYEDTALSPLITTHGFCVTGGVFTSIYDISGDPTAYPPAQLV FT DAPNDYFDRERMARRDLFRRLRAPADRSAIKDRAVFDFLASLVNPTTANPVLDTSFSMA FT YLGASSAHANADEPVILADIRSGSIPGLPIPRRIVQFGYDVVHGSLLDLSRAVPTGTFG FT LVYADLDQVEDAGTDMPAANRAAIAMLGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLY FT ATHATTLHLVKPTIVNSSEVFLVFGGRQSNGALRSTTALQRALLSLYARNAAIDRAVTH FT IPFFGVPDDGTSDLGIDAVRLFDPMFSDAVANLPSNALASLVSRVVPSSIMFTRVPSNG FT PVSTTIYGKRTFLSNRRRARLRDVPMLITTTLVHQRRFTTPPTFTLFSSEAVPVTTLVA FT AGYNSFISEQTRNPNLAHLLDLGTGPECRILSLIPPTLQVTMSDSRPCAELMASFDPAL FT TAYVQGDYSTAAFWNGIRCDSATAIFTIGAAAAAAGTDLIAFVQQLIPRIVAAGGTRMW FT LQLNTPLYEVSSLPDLIEIDLRDHVYRFNGGERVEPYADPVPLQQAIAALLPAAALSWH FT TLSPTCDWLPYIIGVGSPLNLSDINTAISYSRLTPILHIDTTTPPLRVNPVPTPLNQQC FT AIRITSLDPAAVLSVQHNGVEVIGGTPGNVISVAGAAALQYILANQEFLLQFTPTLPGI FT FDVFLTTLGQPPVPRGSFTITPPPTTVALNMPPPRQLDFTDVGNDARITCDPYYQLAVC FT IFKDGQYVRVNPEKASVVTNAPNRDLHFVLDLADNHVLLYLCDVTPSGLGDRIAFPIVD FT IYRIAFPRNTPVRASLPYTGGGAHLTSGGNPFMSLTTPPAVLPAGVALAALSTSVATQY FT PTYTLPAGVYEYVIE" XX SQ Sequence 3949 BP; 748 A; 1342 C; 843 G; 1016 T; 0 other; gttatttgca ttatggctgc ggttttcggc attcagctcg taccaaaact caacacttct 60 acgacacgtc gtacattttt acctctcaga tttgacctac ttctcgatcg cttgcagtcc 120 accaatcttc atggtgtgtt atatcgggcg ctagatttta atccagtcga tcggtccgcc 180 actgttattc agacgtatcc ccctttaaat gcttggtctc cccaccacgc tttcatcgag 240 aacccacttg actaccgcga ttggacggag ttcattcatg accgtgccct cgcctttgtc 300 ggtgtactca ctcaacgtta ccctctcaca cagaacgctc agcgatatac caacccgtta 360 gtgcttggtg cagccttcgg tgatttcctt aatgctcgtt ccattgatat attcctcgat 420 cgactgttct atgacccaac ccaggactct cctatcacgg cgattactaa atttccttac 480 caatggacca ttgactccaa tgtcactact gattctgttc gcacatcggc cggttgtaaa 540 tacattacgc tctatggtta cgatccctca cggccgtcca cccccgcgac atatggcaaa 600 catcgaccta cttatgccac ggtattctac tactccactc ttcccgcccg atctcgtctc 660 ttggcgaacc tcgccgccgg tccaactgtt ttggaacact tcgattctcc tacttatggc 720 ccccatctgc tactgccgca gacaggtgac gtgttgggat acagttccag tctgataagc 780 caagccgctc tgttgatggt ggagtcagtt atggacgccc ttcgggacaa cgctaacgcc 840 agcgcctcta ctgccgtgac acgcttagac caatcgtacc accctgttac ctctttcgat 900 ccctccacgt tcaacacttt gctccagaga gccaccaatc ttgcactgtt agccgtccag 960 ggagtgcaat ccgagagtgc tattccggct attcctacca tgtccgatgt tcggagcttt 1020 gtcgcccgcc ttatggctga aggtgatccg cagcagtggt ttccctaccg cgtcgatcaa 1080 attctgtatt ggcccgagtc cccattcgtg cccccgatag gcccgttcta cgcgcccttc 1140 cgaccggtta acttcccctt cactacgggc tcatacaccg ttgtacccga cgcctctcgg 1200 ccccttcgtc ttctacccca atatcgcaac gctaccatta ccgtccagca agctgatgat 1260 gcgtatgagg acaccgctct atccccgctg atcaccactc atggtttctg tgtcacggga 1320 ggcgttttta cgtccatcta tgacatctct ggggacccca ccgcgtaccc tcccgctcag 1380 ctggttgacg cccccaacga ttattttgat cgtgaacgca tggcgcgacg ggatttgttc 1440 cgacgactac gtgcccccgc cgatcgttct gccattaagg atcgcgccgt gttcgacttc 1500 ctcgcgtctc tcgtcaatcc gacaactgcc aacccagtgc tggatacaag cttttccatg 1560 gcttacttgg gagcgtcctc cgcacatgct aacgccgacg aacccgtcat tcttgctgac 1620 attcgttctg gctccattcc tggcctgcca attccccgcc gcatagttca gtttggctac 1680 gacgttgtcc atggttcttt gctcgatctg tcgcgcgctg tgccgactgg tactttcggt 1740 ctcgtgtacg ctgatcttga ccaggtcgag gatgccggta cggacatgcc tgctgctaat 1800 cgcgccgcta tcgctatgtt aggtactgcc ctccaaatga cgacggctgg tggagtgtcc 1860 gttctcaaag ttaactttcc cacgcgcgcc ttctggactc aagtgtttaa cttatatgcc 1920 actcacgcga cgaccctcca tctggtcaaa cccactatcg tcaactccag tgaggtattt 1980 ctcgttttcg gtgggagaca atctaatggc gctcttcgtt ccaccaccgc actgcagagg 2040 gctttattgt ccctttacgc ccgaaacgct gccatcgatc gcgccgtcac tcacatccct 2100 ttcttcggcg tgcctgatga cggtacctca gacctaggta ttgacgccgt taggctattc 2160 gatccaatgt tctccgatgc cgttgctaat ctcccctcca atgcactggc ctcactagtg 2220 agcagagtcg ttccctcgtc cattatgttc actcgtgtgc cgtctaacgg cccagtctct 2280 accaccatct acgggaagcg caccttcctc agcaaccgtc gtcgggctcg attacgtgac 2340 gtcccaatgc tgatcacgac tacgctcgtg caccaacgtc gcttcaccac tccccccacg 2400 ttcacgttgt tcagctcaga agccgtgccc gtcaccacgc tggtcgctgc cggttacaac 2460 tcctttatct ccgaacagac acgcaatccc aacctagcgc acctgttaga ccttggcacc 2520 ggtccagaat gtcgcatcct atcacttatt ccgccgacgc tccaggtcac catgtccgac 2580 tcacgcccct gcgcggaact gatggcctcc tttgacccag cgctgacggc ctacgttcaa 2640 ggcgactact ctacagctgc tttctggaac ggtatccgat gcgacagtgc gacggccatt 2700 ttcaccattg gtgctgctgc cgctgccgcc ggtaccgacc tgattgcctt cgtccaacaa 2760 ttgatccccc gaattgtcgc agctggaggg acacggatgt ggttacaatt gaacacccct 2820 ctctacgagg tctcttccct gcctgaccta atcgagattg atttgcgcga tcatgtgtat 2880 cgttttaatg gcggtgaacg agtcgaacct tatgctgacc ccgtcccgct tcaacaggca 2940 attgcagcgc tactccctgc cgctgctctc tcatggcata ccctatcccc cacttgtgac 3000 tggctgccct acatcatcgg cgtcggctcg cctctcaact tatctgacat caacaccgct 3060 atcagctatt cccggttgac ccccatcttg cacatcgaca cgaccacccc cccattaagg 3120 gtcaatcccg tgccaacacc acttaatcag cagtgcgcca ttcgcatcac gtctctagac 3180 ccggccgctg tcttgtcggt acagcataat ggcgtggaag tgataggtgg cacccctgga 3240 aatgttatct ccgtcgctgg cgctgcagcg ttacagtata ttctcgccaa ccaagagttc 3300 ttgctacaat ttacccccac attgccgggc atcttcgacg ttttcctcac gacgttaggg 3360 cagccccccg tccctcgtgg ttctttcacc atcactccgc cgccaaccac cgttgccctg 3420 aacatgcccc ctccccgaca attggacttc accgacgttg gcaacgacgc gcgcatcact 3480 tgcgaccctt attaccaact agctgtgtgc atctttaagg atggccagta cgtgcgcgtc 3540 aatcccgaga aggccagcgt cgtgaccaac gcccctaatc gcgacctaca tttcgtcctt 3600 gacttggccg acaaccacgt cctgttatac ctctgcgacg tcacgccctc cggtctaggt 3660 gatcgtatcg ctttcccgat tgttgacatt taccgcatcg ccttcccccg gaacacccct 3720 gtccgcgcgt ccctccccta cactggcggc ggagctcatt taacatccgg tggcaacccc 3780 ttcatgtcac tcacaacgcc tcccgcggtc ctgcccgccg gtgttgccct tgccgcgctc 3840 tccacctctg tcgccactca atatccgacc tacactcttc ctgccggcgt gtacgaatac 3900 gtgattgagt aacgagcgcc cacctccgtc agcctgcatc caattcatc 3949 //