Dbfetch
ID AF259894; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC AF259894; XX DT 02-JAN-2003 (Rel. 74, Created) DT 03-JUL-2009 (Rel. 101, Last updated, Version 5) XX DE African cassava mosaic virus-[Ivory Coast] DNA-A, complete sequence. XX KW . XX OS African cassava mosaic virus-[Ivory Coast] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RX DOI; 10.1023/A:1017536512488. RX AGRICOLA; IND23234213. RA Pita J.S., Fondong V.N., Sangare A., Kokora R.N., Fauquet C.M.; RT "Genomic and biological diversity of the African cassava geminiviruses"; RL Euphytica 120(1):115-125(2001). XX RN [2] RP 1-2781 RA Pita J.S., Sangare A., Kokora R.N., Fauquet C.M.; RT ; RL Submitted (24-APR-2000) to the INSDC. RL ILTAB, Danforth Plant Science Center, 8001 Natural Bridge Road, St. Louis, RL MO 63121, USA XX DR MD5; 7c9fdc8c6c7a06728d7a1c4b01e2d716. DR EuropePMC; PMC1079959; 15784145. DR EuropePMC; PMC3163225; 21812981. DR EuropePMC; PMC3328289; 22416906. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="African cassava mosaic virus-[Ivory Coast]" FT /segment="DNA-A" FT /mol_type="genomic DNA" FT /country="Cote d'Ivoire" FT /db_xref="taxon:222070" FT gene 143..484 FT /gene="AV2" FT CDS 143..484 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /db_xref="GOA:Q8B660" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8B660" FT /protein_id="AAO13737.1" FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRDL FT VSVIRARNYVEATRRYHHFHSRLQGSSKAELRQPIQEPCYCPHCPRHKSKTGLDEQAHV FT QKAHDVQDV" FT gene complement(288..1013) FT /gene="AC5" FT CDS complement(288..1013) FT /codon_start=1 FT /gene="AC5" FT /product="AC5" FT /db_xref="GOA:Q8B659" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:Q8B659" FT /protein_id="AAO13742.1" FT /translation="MSTCHVQKQSILCVILILPCLLMIICHVMIQPVKPFNQRLLLHAR FT WTTNNSGMKFPQNLKPIPQIVLNCCSTGLIIKHVKYLPKVLGRIAIRPSIPKQVKHHII FT RVILLLNIFIHPDLTKDVNGLDTKPLSDSVCQPRPTCHITNHLTDTKVLHIIPLLKRLD FT LTWAFTAPRYVWASIHPVHHGLSVHGPVHPGPFSICDVDSGGSSTVPVWAVEVQPSTNL FT GAWSGNDDISWSLRHNYEP" FT CDS 303..1079 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q8B658" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q8B658" FT /protein_id="AAO13738.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQVLRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQETGKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" FT gene complement(1076..1480) FT /gene="AC3" FT CDS complement(1076..1480) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="GOA:Q8B657" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8B657" FT /protein_id="AAO13741.1" FT /translation="MDLRTGELITAPQAMNGVYTWDINNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFRIWTTLRPQTGLFLRVFRYQVLKYLDNMGVISINN FT VIRAADHVLFNVIEKTIECQLTHEIKFHVY" FT gene complement(1221..1628) FT /gene="AC2" FT CDS complement(1221..1628) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:Q8B656" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8B656" FT /protein_id="AAO13740.1" FT /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGHKQSPVFHNHQAPTTTIPAEPGHHNSPGSIQSQ FT PEEGAGDSQMFSQLQDLDDLTASDWSFLKGL" FT gene complement(1537..2613) FT /gene="AC1" FT CDS complement(1537..2613) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /db_xref="GOA:Q8B655" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8B655" FT /protein_id="AAO13739.1" FT /translation="MRTPRFRVQAKNVFLTYPKCSIPKEHLLSFLQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKLTITNNRLFDCVHPSCSTNFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFPCSSFDQVPDEIEEWVADNVRDSAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFITLTEPLY FT SGSNQSQSQTIQEASHPA" XX SQ Sequence 2781 BP; 749 A; 562 C; 679 G; 791 T; 0 other; taatattacc ggttggcccc gccccccttt aaatgtggtc cccgcgcact acttatgtcg 60 gccaatcatg cggtagcgtt aaaggttatt tattagtggt ggaccactat atacttacag 120 acgaagttgt tgctagtgcg caatgtggga tccactggtg aatgagtttc cagactcggt 180 gcatgggctt aggtgtatgc ttgcaattaa atatttgcag gccttagagg atacatacga 240 gcccagtacg ttgggccacg atctggttag agatctagtc tcggtcatca gggctcgtaa 300 ttatgtcgaa gcgaccagga gatatcatca tttccactcc aggctccaag gttcgtcgaa 360 ggctgaactt cgacagccca tacaggaacc gtgctactgc ccccactgtc cacgtcacaa 420 atcgaaaacg ggcctggatg aacaggccca tgtacagaaa gcccatgatg tacaggatgt 480 atagaagccc agacatacct aggggctgtg aaggcccatg taaggtccag tcgtttgagc 540 agagggatga tgtgaagcac cttggtatct gtaaggtgat tagtgatgtg acacgtgggc 600 ctgggctgac acacagagtc ggaaagaggt tttgtatcaa gtccatttac atccttggta 660 agatctggat ggatgaaaat attaagaagc agaatcacac gaataatgtg atgttttacc 720 tgcttaggga tagaaggcct tatggcaata cgccccaaga ctttgggcag atatttaaca 780 tgtttgataa tgagcccagt actgcaacaa ttaagaacga tttgagggat aggtttcagg 840 ttttgaggaa atttcatgcc actgttattg gtggtccatc tggcatgaag gagcaggcgt 900 tggttaaaag gttttacagg ttgaatcatc acgtgacata taatcatcag gagacaggga 960 agtatgagaa tcacacagag aatgctttgc ttttgtacat ggcatgtact catgcctcca 1020 atcctgtata tgctacgttg aaaatacgta tatacttcta tgatagtatt ggcaactaat 1080 aaacatggaa ttttatttca tgagtcaact gacactcaat agttttttca attacattga 1140 acaaaacatg atcagcagct ctaattacat tgttaattga gataacaccc atattatcca 1200 agtatttaag tacttggtat ctaaagaccc ttaagaaaag accagtctga ggccgtaagg 1260 tcgtccagat cctgaagttg agaaaacatt tgtgaatccc cagctccttc ctcaggttgt 1320 gattgaatcg aacctggact gttatgatgt cctggttcag caggaatggt cgttgttggt 1380 gcctggtgat tgtgaaatac aggggattgt ttatgtccca ggtatacacg ccattcattg 1440 cttgaggagc agtgatgagt tcccctgtgc gtaaatccat gattggagca gttgatatgg 1500 aggtaatatg aacagccaca gacaagatcc actctcctac gccggatggc tcgcttcttg 1560 aattgtctgt gactgacttt gattggaacc tgagtagagt ggttctgtga gggtgatgaa 1620 gattgcattc tttaatgccc aggcctttag cgcctcttgc ttttcctcgt ctaggaactc 1680 tttataggac gaggtaggtc ctggattgca gaggaagata gtgggaatgc cacctttaat 1740 ttgaacgggt ttcccgtatt tcgtgttgga ctgccagtcc ctctgggacc ccatgaattc 1800 cttaaagtgc tttaggtagt ggggatcgac gtcatcaatg acgttgtacc aggcagcatt 1860 attgaagacc tttggactaa ggtccaggtg tccacacagg taattgtgtg ggcctaaaga 1920 tcgggcccat atcgtcttcc ctgttctgct atcaccttct attacaatac tattgggtct 1980 ccatggccgc gcagcggaat ccctaacatt atcagcgacc cattcttcaa tttcatcagg 2040 aacttggtca aaggaagaac atgggaaggg agaaacataa ggagctggtg gctcctggaa 2100 aatcctatct aaattactat ttagattatg aaactgaagt acaaagtcct ttgggactaa 2160 ttccctaatt acattaagag cttctgactt actgccgctg ttaagcgctt tggcgtaagc 2220 atcattcgct gattgttgac cgcctctagc agatcgtcca tcgatctgaa attgtcccca 2280 ttcgacggtg tctccgtcct tatccagata ggacttgaca tctgagcttg atttggcacc 2340 ttgaatgttg gggtggaaat tggtgctaca gcttgggtgt acacaatcga agagacgatt 2400 gttcgtaatc gtgagttttc cctcgaattg gatgagggca tgcaagtgag gttccccatt 2460 ctgatgcagc tctctacaga ttttaatgaa cttagggttt gatgggagag atagtgtttg 2520 aaggaatgac agcaggtgtt ctttgggtat agaacactta gggtatgtga gaaagacatt 2580 cttggcttga actctaaaac gaggcgttcg cattttgacc aagtcaaatg gagacactca 2640 actagagaca ctcttgagca tctcctcctg ttaattggag acattatata ggtggctcta 2700 aatggcattc ttgtaataag ttgaacttta atttgaatta aaaggctcaa aaggcgtaga 2760 actcccaagg ggccaaccgt a 2781 //