ID AF251262; SV 1; linear; genomic RNA; STD; VRL; 2239 BP. XX AC AF251262; XX DT 02-OCT-2000 (Rel. 65, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Grass carp hemorrhagic virus segment M5 inner capsid protein VP4 gene, DE complete cds. XX KW . XX OS Grass carp hemorrhagic virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus. XX RN [1] RP 1-2239 RA Qiu T., Lu R., Zhang J., Zhu Z.; RT "Complete nucleotide sequence of grass carp reovirus segment M5"; RL Unpublished. XX RN [2] RP 1-2239 RA Qiu T., Lu R., Zhang J., Zhu Z.; RT ; RL Submitted (03-APR-2000) to the INSDC. RL Department of Fish Genetics and Breeding, Institute of Hydrobiology, RL Chinese Academy of Sciences, Luo Jia Shan, Wuhan, Hubei 430072, China XX DR MD5; a96de95449af5e27c40b2e4cc6b21f14. DR EuropePMC; PMC5123877; 16297481. XX FH Key Location/Qualifiers FH FT source 1..2239 FT /organism="Grass carp hemorrhagic virus" FT /segment="M5" FT /strain="873" FT /mol_type="genomic RNA" FT /db_xref="taxon:128986" FT CDS 18..2204 FT /codon_start=1 FT /product="inner capsid protein VP4" FT /db_xref="GOA:Q9E5Y9" FT /db_xref="InterPro:IPR012494" FT /db_xref="UniProtKB/TrEMBL:Q9E5Y9" FT /protein_id="AAG17627.1" FT /translation="MITIVVIPTAHFSWTDTNFLNSVDYRLTSQPKIRDRFAVYAPGWL FT RRQLDEFSASLTASELLQALQTIPIPVKARCLLLPKPKRFAQWLLDVPSANIWHIPVTT FT LCATVASKHPSSDVYNYIPDHVPPNAEFDTVTRRVAAGRDIYVRSTKVIGAPLCLAAPA FT KYCAGYLSTHQLDGIYPENWAPDNFHKREFCLTILPSLLGPRTFLLDVDADRDASYPLS FT VLWPQLRALALKSRLLLPPVALLRRVVDPGLKPTWSADSDAAFRALRLSRPSSASKPVG FT FDFSALPVVDIICLLESEPDDHGRIAPGTRLTIHSVPTDLLTSLSIQEGVRYPLRQESG FT MFVHWVLLALLMSDDVTISGTRRSVKLETAHASARPFVHITVERCASARIIDVRGSPAM FT YANAVCLTLPKGSYKSTIIDTLPAMFSDLPILEQAAVIDSDALGDSLRPSFETQFLERL FT ENLDPNLLDRAVASILSPTSDTSDDAVTTVLDAFNALYREIMTPAQRARLPLLTQQGRV FT LAFAHSDYELLSANIPIQVVRGSILIDHVVNLLARRNRVGGTALQVLLDYCYRTQASPL FT APTPAGRLYKQLFGPWLMVPRLSEPLIKLRLVASAPAKVLRAAGWTIDGDPPLEVSCLC FT AYVTDRAAATALIERRLDSRALVTVGGDQLMFVEYAPPLPLVSIPRTFLLPVTYVVHWV FT SPQRVLLNGGNVSFTSGLEWTFDDDPQVVTSTGV" XX SQ Sequence 2239 BP; 423 A; 715 C; 498 G; 603 T; 0 other; gttatttgta gccaaggatg atcaccattg tggttattcc aacagcccac ttctcatgga 60 ccgataccaa ctttttaaac tctgtcgatt accgactcac ttcacaacct aaaatcagag 120 atcgcttcgc tgtttatgcc cctggttggc ttagacgtca gttggacgag ttctccgcct 180 cccttaccgc ttctgaactc cttcaagccc ttcaaacaat tccaatccct gttaaagctc 240 gatgcctcct tctgcctaag cccaagcgct ttgcacagtg gctacttgac gttccctctg 300 ctaatatttg gcatatccca gtgaccactc tttgcgcgac tgtagcgtcc aagcatcctt 360 cctcagacgt ctataactac attcccgatc acgtaccacc gaacgccgaa ttcgataccg 420 tcacccgtcg cgttgctgcc ggccgtgata tctatgtccg atcgaccaag gttattggcg 480 ctcctctctg tctagctgcc cccgccaaat attgcgccgg ttatctctcc actcaccaac 540 ttgacggtat ttatcccgaa aactgggcac ctgataattt ccacaaacgt gaattctgtc 600 tcactatcct gccctccctc ctcggaccga gaacgttttt gctcgatgtc gacgccgacc 660 gcgatgcctc gtatccacta tctgtgctct ggccacaact gcgtgccctc gccctcaaat 720 ctagattact actacctcca gtggcgctgt tacgccgtgt tgtcgaccct ggactcaaac 780 ccacttggtc tgctgatagt gacgcggctt ttcgagctct acgattatct cgcccatcct 840 ctgcctccaa gccggttggt tttgattttt ctgcccttcc agtcgttgac atcatctgcc 900 ttcttgaatc agaacccgac gatcacggtc gaattgcccc cggaacaagg ctcaccattc 960 actccgtacc tactgatcta ctaacctccc tctccattca agagggcgtc cggtatcccc 1020 tacgacagga aagtggtatg ttcgtgcact gggtactact ggctctattg atgtctgatg 1080 acgtcaccat ttccggcact cgtcggtctg tgaagctgga gactgctcac gcgtcggctc 1140 gtcctttcgt ccacatcact gtcgagcgtt gtgcttcagc tcgtatcatt gacgtgcgcg 1200 gttcccccgc tatgtacgcc aacgcggtat gccttaccct acctaagggt tcgtataagt 1260 ctacgatcat cgatacatta ccggccatgt tcagtgatct gcccattctc gagcaggctg 1320 cggtcattga ctccgacgct ttaggagact ctcttcgtcc ctcattcgaa actcaattcc 1380 ttgaacgttt ggaaaacctc gacccgaatc tccttgatcg tgccgtcgcg tctattctta 1440 gcccgacaag cgacacctcc gacgacgctg tcacgaccgt gctcgacgct ttcaacgccc 1500 tctaccgcga aatcatgacc cctgcccaac gcgctcggtt accattgctt actcaacagg 1560 gtcgcgttct ggcctttgcc cactccgatt atgagctcct gtccgccaat attcctattc 1620 aagtggtccg aggatccatc ctgatagacc atgttgtcaa tttgctcgca cgtcgcaatc 1680 gggtgggtgg cacggctctg caagttctgc ttgactactg ttaccgcacg caggcgtcac 1740 cactggcccc aacgcccgct ggccgattat acaaacagct ttttggtcca tggttgatgg 1800 tgcctcggtt gtctgagcct ctaatcaagc tacgtctagt ggcctcggcc cctgctaagg 1860 tgttacgagc cgcgggttgg acgattgatg gtgatccccc attggaggtg tcctgcctat 1920 gtgcgtacgt cacggaccgt gccgcagcaa ccgccctcat agaacgtcgg cttgactcac 1980 gtgccctggt caccgttggg ggagatcagc tcatgttcgt agaatacgcg ccgccccttc 2040 ccctggtttc tatcccccgc acgttccttc tgcctgtcac ttacgttgtc cactgggttt 2100 ccccgcagcg cgtgctactg aacggtggta acgtgtcctt taccagtggg cttgagtgga 2160 cctttgatga tgatcctcag gttgtcacct cgaccggggt ttgagcaggt cgaggagtcc 2220 tgacgctacg ccgatcatc 2239 //