ID AF248500; SV 1; linear; genomic RNA; STD; VRL; 2688 BP. XX AC AF248500; XX DT 25-OCT-2000 (Rel. 65, Created) DT 25-OCT-2000 (Rel. 65, Last updated, Version 1) XX DE Potato virus Y isolate PVYN-Wi-P polyprotein gene, partial cds. XX KW . XX OS Potato virus Y OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2688 RA Glais L., Tribodet M., Kerlan C.; RT "Are the HC-Pro protein and the mosaic structure of potato potyvirus Y RT (PVY) genome implicated in necrosis in tobacco and potato tubers, RT respectively?"; RL Unpublished. XX RN [2] RP 1-2688 RA Glais L., Tribodet M., Kerlan C.; RT ; RL Submitted (23-MAR-2000) to the INSDC. RL Sante des Plantes et Environnement, INRA, Le Rheu F-35653, France XX DR MD5; c4934e19635b74f95342c65e8897629c. DR EuropePMC; PMC2704195; 19419565. XX FH Key Location/Qualifiers FH FT source 1..2688 FT /organism="Potato virus Y" FT /host="Solanum tuberosum" FT /strain="necrotic 'N'" FT /isolate="PVYN-Wi-P" FT /mol_type="genomic RNA" FT /db_xref="taxon:12216" FT 5'UTR 1..184 FT CDS 185..>2688 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q9E6F6" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR039560" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:Q9E6F6" FT /protein_id="AAG24786.1" FT /translation="MATYMSTICFGSFECKLPYSPASCGHIVKEREVLASVDPFADLET FT QLSARLLKQKYATVRVLKNGTLTYRYKTDAQITRIQKKLERKDREEYHFQMAAPSIVSK FT ITIAGGEPPSKLESQVRRGVIHTTPRMRTAKTYHTPKLTEGQMNHLIKQVKQIMSTKGG FT SVQLISKKSTHVHYKEVLGSHRAVVCTAHMRGLRKRVDFRCDKWTVVRLQHLAKTDKWN FT NQVRATDLRKGDSGVILSNTNLKGNFGRSSEGLFIVRGSHEGKIYDARSKVTQGVMDSM FT VQFSSAESFWKGLDGNWAQMRYPTDHTCVAGLPVEDCGRVAAIMTHSILPCYKITCPTC FT AQQYANLPASDLLKILHKHASDGLNRLGADKDRFVHVKKFLTILEHLTEPVDLSLEIFN FT EVFKSIGEKQQSPFKNLNILNNFFLKGKENTAREWQVAQLSLLELARFQKNRTDNIKKG FT DISFFRNKLSAKANWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNYFEEIDPAKGYSA FT YENRLHPNGTRKLAIGNLIVPLDLAEFRRNMKGDYKRQPGVSKKCTSSKDGNYVYPCCC FT TTLDDGSAVESTFYPPTKKHLVIGNSGDQKYVDLPKGNSEMLYIARQGFCYINIFLAML FT INISEEDAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHE FT TQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESDIKHYRVGGVPNACPELGSTI FT SPFREGGVIMSESAALKLLLKGIFRPKVMRQLLLDEPYLLILSILSPGILMAMYNNGIF FT ELAVRLWINEKQSIAMIASLLSA" FT mat_peptide 185..1009 FT /product="P1" FT mat_peptide 1010..2404 FT /product="HC-Pro" FT mat_peptide 2405..>2688 FT /product="P3" XX SQ Sequence 2688 BP; 852 A; 527 C; 599 G; 710 T; 0 other; aattaaaaca actcaataca acataagaaa aacaacgcaa aaacactcat aaacgcttat 60 tctcactcaa gcaacttgct aagtttcagt ttaaatcatt tccttgcaat tctcttaaac 120 gatattggaa accatttcaa ctcaacaagt aatttcatca cttccaacca attttagatc 180 ctcaatggca acttacatgt caacaatctg tttcggttcg tttgaatgca agctaccata 240 ctcacccgcc tcttgcgggc atattgtgaa ggaacgagaa gtactggctt ccgttgatcc 300 tttcgcagat ctggaaacac aacttagtgc acgattgctc aagcaaaaat atgctactgt 360 tcgtgtgctc aagaacggta ctcttacgta ccgatacaag actgatgccc agataacgcg 420 catccagaag aaactggaaa ggaaggatag ggaagaatat cacttccaga tggcagctcc 480 tagtattgtg tcaaagatca ctattgctgg tggagagcca ccttcaaaac ttgaatcaca 540 agtgcggagg ggtgtcatcc acacaactcc aaggatgcgc acagcaaaaa catatcacac 600 gccaaagttg acagagggac aaatgaatca ccttatcaag caggtgaagc aaattatgtc 660 aaccaaagga gggtctgttc aactgattag caagaaaagt acccatgttc actataaaga 720 agttttggga tcacatcgcg cagttgtttg cactgcacat atgagaggtt tacgaaagag 780 agtggacttt cggtgtgata aatggaccgt tgtgcgtcta cagcatctcg ccaagacgga 840 caagtggaat aaccaagttc gtgctactga tctacgcaag ggcgatagtg gagttatatt 900 gagtaatact aatctcaaag gaaactttgg gagaagctcg gagggcctat tcatagtgcg 960 tgggtcgcac gaaggaaaaa tctatgatgc acgttccaag gttactcaag gggttatgga 1020 ttcaatggtt cagttctcaa gcgctgaaag cttttggaag ggattggacg gcaattgggc 1080 acaaatgaga tatcctacag atcatacatg tgtggcaggc ttaccagttg aagactgcgg 1140 cagagttgca gcgataatga cacacagtat tttaccgtgc tataagataa cctgccctac 1200 ctgtgcccaa caatatgcca acttgccagc cagtgactta cttaagatat tacacaagca 1260 cgcaagtgat ggtttaaatc gattgggggc agacaaagat cgctttgtgc atgtcaaaaa 1320 gttcttgaca atcttagagc acttaactga accggttgat ctgagtctag aaattttcaa 1380 tgaagtattc aagtctatag gggagaagca acaatcacct ttcaaaaacc tgaatattct 1440 gaataatttc tttttgaaag gaaaggaaaa tacagctcgt gaatggcagg tggctcaatt 1500 aagcttactt gaattggcaa gattccaaaa gaacagaacg gataatatca agaaaggaga 1560 catctcgttc tttaggaata aactatctgc caaagcaaat tggaacttgt acctgtcatg 1620 tgataaccag ctggataaga atgcaaactt cctgtgggga cagagggaat atcatgctaa 1680 gcgatttttc tcgaactatt tcgaggaaat tgatccagcg aagggctatt cagcatatga 1740 aaatcgtctg catccgaatg ggacaagaaa acttgcaatt ggaaacctaa ttgtaccact 1800 tgatctggct gagtttaggc ggaatatgaa aggtgattat aaaagacagc caggggtgag 1860 taagaagtgc acgagctcga aggatggaaa ctacgtgtat ccctgttgtt gcactacact 1920 tgatgatggc tcagctgttg aatcaacatt ttacccgcca actaagaagc acctcgtaat 1980 aggtaatagt ggcgaccaaa agtatgttga cttaccaaaa gggaattctg agatgttata 2040 tattgccagg caaggcttct gttacattaa cattttcctc gcgatgttga ttaacattag 2100 tgaggaagat gcaaaggatt tcactaagaa ggttcgtgac atgtgtgtgc caaagcttgg 2160 aacctggcca accatgatgg atctggctac aacttgtgct caaatgaaaa tattctaccc 2220 tgatgttcat gatgcagaac tgcctagaat actagtcgat cacgaaacgc agacatgcca 2280 tgtggttgac tcatttggct cacaaacaac tgggtatcat attttgaaag catctagcgt 2340 gtcccaactt attttgtttg ctaatgatga gttggagtct gacattaaac attatagagt 2400 tggtggtgtt cctaatgcat gccctgaact tgggtccaca atatcacctt tcagagaagg 2460 aggagttata atgtctgagt cggcagcgct gaaactgctt ttgaagggaa tttttagacc 2520 taaggtgatg agacagttgc tgttagatga gccttacctg ttgattctat caatattatc 2580 ccctggcata ctgatggcta tgtacaataa tgggattttt gaacttgcgg taaggttgtg 2640 gatcaatgag aaacaatcca tagctatgat agcatcgcta ctatcagc 2688 //