ID AF248499; SV 1; linear; genomic RNA; STD; VRL; 2699 BP. XX AC AF248499; XX DT 25-OCT-2000 (Rel. 65, Created) DT 25-OCT-2000 (Rel. 65, Last updated, Version 1) XX DE Potato virus Y isolate PVYN-N242 polyprotein gene, partial cds. XX KW . XX OS Potato virus Y OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2699 RA Glais L., Tribodet M., Kerlan C.; RT "Are the HC-Pro protein and the mosaic structure of potato potyvirus Y RT (PVY) genome implicated in necrosis in tobacco and potato tubers, RT respectively?"; RL Unpublished. XX RN [2] RP 1-2699 RA Glais L., Tribodet M., Kerlan C.; RT ; RL Submitted (23-MAR-2000) to the INSDC. RL Sante des Plantes et Environnement, INRA, Le Rheu F-35653, France XX DR MD5; 21d0d91c3b8bb91dc4071045745924f0. DR EuropePMC; PMC2704195; 19419565. XX FH Key Location/Qualifiers FH FT source 1..2699 FT /organism="Potato virus Y" FT /host="Solanum tuberosum" FT /strain="necrotic 'N'" FT /isolate="PVYN-N242" FT /mol_type="genomic RNA" FT /db_xref="taxon:12216" FT 5'UTR 1..188 FT CDS 189..>2699 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q9E6F7" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR039560" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:Q9E6F7" FT /protein_id="AAG24785.1" FT /translation="MATYTSTILFGSIECKLPYSPAPFGLIAGKREVSTTTDPFASLEM FT QLSARLQRQKFATIRTSKNGTCMYRYKTDVQIARIQKKREEREREEYNFQMAASSVVSK FT ITIAGGEPPSKLESQVRRGVIHTTPRMRTAKTYHTPKLTEGQMNHLIKQVKQIMSTKGG FT SVQLISKKSTHVHYKEVLGSHRAVVCTAHMRGLRKRVDFRCDKWTVVRLQHLARTDKWT FT NQVRATDLRKGDSGVILSNTNLKGNFGRSSEGLFIVRGSHEGKIYDARSKVTQGVMDSM FT VQFSSAESFWKGLDGNWAQMRYPTDHTCVAGLPVEDCGRVAAIMTHSILPCYEITCPTC FT AQQYANLPASDLLKILHKHASNGLNRLGADKDRFVHVKKFLTILEHLTEPVDLSLEIFN FT EVFKSIGEKQQSPFKNLNILNNFFLKGKENTAREWQVAQLSLLELARFQKNRTDNIKKG FT DISFFRNKLSAKANWNLYLSCDNQLGENANFLWGQREYHAKRFFSNYFEEIDPAKGYSA FT YENRLHPNGTRKLAIGNLIVPLDLAEFRRKMKGDFKRQPGVSKKCTSSKDGNYVYPCCC FT TTLDDGSAVESTFYPPTKKHLVIGNSGDQKYVDLPKGNSEMLYIARQGFCYINIFLAML FT INISEEDAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHE FT TQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESDIKHYRVGGVPNACPELGSTI FT SPFREGGVIMSESAALKLLLKGIFRPKVMRQLLLDEPYLLILSILSPGILMAMYNNGIF FT ELAVRLWINEKQSIAMIASLLSALA" FT mat_peptide 189..1013 FT /product="P1" FT mat_peptide 1014..2408 FT /product="HC-Pro" FT mat_peptide 2409..>2699 FT /product="P3" XX SQ Sequence 2699 BP; 863 A; 521 C; 601 G; 714 T; 0 other; aattaaaaca actcaataca acataagaaa aacaacgcaa aaacactcac aaaagctttc 60 aactctaatt caaacaattt gttaagtttc aatttcgatc ttcatcaaac aaactctttc 120 aatttcagtg taagctatcg taattcagta agttatttca aactctcgta aattgcagaa 180 gatcatccat ggcaacttac acatcaacaa tcctgtttgg ttccattgaa tgcaaacttc 240 catactcacc cgctcctttt gggctaattg cggggaaacg agaagtttca accaccactg 300 accccttcgc aagtttggag atgcagctta gtgcgcgatt acaaaggcaa aagtttgcaa 360 ctattcgaac atccaagaat ggtacttgca tgtatcgcta caagactgat gtccagattg 420 cgcgcattca aaagaagcgc gaggaaagag aaagagagga atataatttc caaatggctg 480 cgtcaagtgt tgtgtcgaag atcactattg ctggtggaga gccaccttca aaacttgaat 540 cacaagtgcg gaggggtgtc atccacacaa ctccaaggat gcgcacagca aaaacatatc 600 acacgccaaa gttgacagag ggacaaatga accaccttat caagcaggtg aagcaaatta 660 tgtcaaccaa aggagggtct gtccaactga ttagcaagaa aagtacccat gttcactata 720 aagaagtttt gggatcacat cgcgcagttg tttgcactgc acatatgaga ggtttacgaa 780 agagagtgga ctttcggtgt gataaatgga ccgttgtgcg tctacagcat ctcgccagga 840 cggacaagtg gactaaccaa gttcgtgcta ctgatctacg caagggcgat agtggagtta 900 tattgagtaa tactaatctc aaaggaaact ttgggagaag ctcggagggc ctattcatag 960 tgcgtgggtc gcacgaagga aaaatctatg atgcacgttc caaggttact caaggggtta 1020 tggattcaat ggttcagttc tcaagcgctg aaagcttttg gaagggattg gacggcaatt 1080 gggcacaaat gagatatcct acagatcata catgtgtggc aggcttacca gttgaagact 1140 gtggcagagt tgcagcgata atgacacaca gtattttacc gtgctatgag ataacctgcc 1200 ctacctgtgc ccaacaatat gccaacttgc cagccagtga cttacttaag atattacaca 1260 agcacgcaag taatggttta aatcgattag gggcagacaa agatcgcttt gtgcatgtca 1320 aaaagttctt aacaatctta gagcacttaa ctgaaccggt tgatctgagt ctagaaattt 1380 tcaatgaagt attcaagtct ataggggaga agcaacaatc acctttcaaa aacctgaata 1440 ttctgaataa tttctttttg aaaggaaagg aaaatacagc tcgtgaatgg caggtggctc 1500 aattaagctt acttgaattg gcaagattcc aaaagaacag aacggataat atcaagaaag 1560 gagacatttc gttctttagg aataaactat ctgccaaagc aaattggaac ttgtatctgt 1620 catgcgataa ccagctgggt gagaatgcaa acttcctgtg gggacagagg gaatatcatg 1680 ctaagcgatt tttctcgaac tatttcgagg aaattgatcc agcgaagggc tattcagcat 1740 acgaaaatcg tttgcatccg aatgggacaa gaaaacttgc aattggaaac ctaattgtac 1800 cacttgatct ggctgagttt aggcggaaga tgaaaggtga ttttaaaaga cagccagggg 1860 tgagtaagaa gtgcacgagc tcgaaggatg gaaactacgt gtatccctgt tgttgcacta 1920 cacttgatga tggctcagct gttgaatcaa cattttaccc gccaactaag aagcacctcg 1980 taataggtaa tagtggcgac caaaagtatg ttgacttacc aaaagggaat tctgagatgt 2040 tatatattgc caggcaaggc ttctgttaca ttaacatttt cctcgcgatg ttgattaaca 2100 ttagtgagga agatgcaaag gatttcacta agaaggttcg tgacatgtgt gtgccaaagc 2160 ttggaacctg gccaaccatg atggatctgg ctacaacttg tgctcaaatg aaaatattct 2220 accctgatgt tcatgatgca gaactgccta gaatattagt cgatcacgaa acgcagacat 2280 gccatgtggt tgactcgttt ggctcacaaa caactgggta tcatattcta aaagcatcca 2340 gcgtatctca acttatcttg tttgcaaatg atgaattaga atctgatata aaacattata 2400 gagttggtgg tgttcctaat gcatgccctg aacttgggtc cacaatatca cctttcagag 2460 aaggaggagt tataatgtct gagtcggcag cgctgaaact gcttttgaag ggaattttta 2520 gacctaaggt gatgagacag ttgctgttag atgagcctta cttgttgatt ctatcaatat 2580 tatcccctgg catactgatg gctatgtaca ataatgggat ttttgaactt gcggtaaggt 2640 tgtggattaa tgagaaacaa tccatagcta tgatagcatc gctactatca gctttagcc 2699 //