ID AF240675; SV 1; linear; genomic DNA; STD; VRL; 2746 BP. XX AC AF240675; XX DT 22-JUN-2000 (Rel. 64, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Tobacco curly shoot virus-[Y1] DNA A, complete sequence. XX KW . XX OS Tobacco curly shoot virus - [Y1] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2746 RA Xie Y., Zhou X., Zhang Z., Qi Y.; RT "Tobacco curly shoot virus isolated in Yunnan is a distinct species of RT Begomovirus"; RL Chin. Sci. Bull. 47(3):197-200(2002). XX RN [2] RP 1-2746 RA Zhou X., Qi Y., Zhang Z.; RT ; RL Submitted (02-MAR-2000) to the INSDC. RL Institute of Biotechnology, Zhejiang University, Kaixuan Road 268, RL Hangzhou, Zhejiang 310029, P. R. China XX DR MD5; a65f729372525a44d3b33c91db96e033. XX FH Key Location/Qualifiers FH FT source 1..2746 FT /organism="Tobacco curly shoot virus - [Y1]" FT /chromosome="DNA A" FT /isolate="y1" FT /mol_type="genomic DNA" FT /db_xref="taxon:223331" FT CDS 134..490 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q9IGX7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q9IGX7" FT /protein_id="AAF75541.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQANEQ FT KAQDVQDVQKSRCP" FT CDS 294..1064 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /note="coat protein" FT /db_xref="GOA:Q9IGX6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q9IGX6" FT /protein_id="AAF75540.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKVWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1061..1465) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q9IGX5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q9IGX5" FT /protein_id="AAF75544.1" FT /translation="MDSRTGELITAAQAENGVYIWEIQNPLYFKIIDHQNRPFLMKEDI FT ITLQIQFNYNLRKALGVHKCFLVYRIWLTSQPQTGRFLRVFKTQVMKFLNNLGVISLNN FT VIRAVDHVLWNLLQHIVYVEQSYLIKFNIY" FT CDS complement(1206..1610) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q9IGX4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q9IGX4" FT /protein_id="AAF75543.1" FT /translation="MRSSSPSKAHSTQVPIKVKHRLAKEGNRRRRVDLPCGCSYFIALA FT CHDHGFTHRGTHHCSSSREWRVYLGDSKSPLFQDNRPPEPSISHERRHNHVTNTVQLQP FT EESSGSAQVFSSLPNLVDFTASDWSFLKGL" FT CDS complement(1513..2598) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /note="Rep protein" FT /db_xref="GOA:Q9IGX3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9IGX3" FT /protein_id="AAF75542.1" FT /translation="MPQLKKFIINAKNYFLTYPQCSLTKEEALSQISALSTPTNKLFIR FT ICRELHEDGSPHLHVLIQFEGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKSSTDVKAYM FT EKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKAAALNILKEKAPKDFVLQFH FT NLNSNLDRIFTPPIEKTFLLFYLLLSTKFQKNLKNGLLANVVSAVGGPLRPMSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNKALKNWSLKNAIFVTLESPL FT YTGSNQSEAQASQGGEQASTC" FT CDS complement(2148..2441) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q9IGX2" FT /protein_id="AAF75545.1" FT /translation="MGLLTCMSSSSSKANSNAKTTDSSISHPQAGQHISIRTFRELKAQ FT QMLKHTWKKTETCLIMEFSRSMEDQLEEVANLPTTHMPRQSIQGPKQRPSIY" XX SQ Sequence 2746 BP; 765 A; 531 C; 611 G; 839 T; 0 other; accggatggc cgcgattttt tttaaagtgg gccccttgat gtgatatgtc atccaatcaa 60 aacgctcccc caaagcttaa ttgttttgtg gtcccttatt taaacttcct caccaagtac 120 tgcactccgc actatgtggg atccattagt aaacgagttt cccgaaaccg ttcacggctt 180 taggtgtatg ttagcagtta aatatctgca gttagtagag aagacttatt ctcctgacac 240 attaggtcac gatttaatta gggatttaat ttcagtaatt agggctagaa attatgtcga 300 agcgaccagc agatataatc atttccacgc ccgcttcgaa ggtacgccgc cgtctcaact 360 tcgacagccc atatgtgagc cgtgctgctg cccccattgt ccgcgtcacc aaagcaagag 420 catgggcgaa caggccaatg aacagaaagc ccaggatgta caggatgtac agaagtccag 480 atgtccctag aggatgtgaa ggcccatgta aggtccagtc ttttgagtct agacatgata 540 ttcagcatat aggtaaagtc atgtgtgtta gtgatgttac gcgtggaact gggctgaccc 600 accgagtggg taaaaggttt tgtgtgaaat ccgtttatgt gttgggtaag gtctggatgg 660 acgagaatat taagaccaaa aatcacacga atagtgtgat gtttttttta gttagggatc 720 gtagacctgt ggataaacct caagattttg gggaggtttt taacatgttt gataatgagc 780 ccagtacggc tactgtgaag aatgttcatc gtgataggta tcaagttctt cggaaatggc 840 atgcaactgt gactggtgga caatatgcgt caaaggaaca agctctcgtg aagaaatttg 900 ttagggttaa taattatgtt gtgtataacc agcaagaagc tgggaagtat gagaatcatt 960 ctgagaatgc gttaatgttg tatatggcat gtactcatgc ctctaaccca gtgtatgcta 1020 ctttgaagat acggatctat ttctatgatt ccgtaacaaa ttaataaata ttgaatttta 1080 ttaaataaga ttgttctaca tatactatat gttgtaataa attccataat acatgatcca 1140 cagcacgaat tacattattc aaactgatta cacccaaatt attaagaaac ttcataactt 1200 gagtcttaaa gacccttaag aaacgaccag tctgaggctg tgaagtcaac cagattcggt 1260 agactagaaa acacttgtgc actcccagag ctttcctcag gttgtagttg aactgtattt 1320 gtaacgtgat tatgtcttct ttcatgagaa atggacggtt ctggtggtct attatcttga 1380 aataaagggg attttgaatc tcccagatat acacgccatt ctctgcttga gctgcagtga 1440 tgagttcccc tgtgcgtgaa tccatgatcg tgacaggcta gtgctatgaa atatgaacat 1500 ccacaaggga ggtcaacacg tcgacgcctg ttcccctcct tggctagcct gtgcttcact 1560 ttgattggaa cctgtgtaga gtgggctttc gagggtgacg aagatcgcat tctttaaaga 1620 ccaattttta agtgctttat ttttctcttc atccaagaat tctttatagc tagagttggg 1680 tcctggattg cagaggaaga tagtgggaat tccgccttta atttgaactg gctttccgta 1740 tttcgtgttg ctttgccagt ctctttgggc ccccatgaat tctttaaagt gctttagata 1800 gtgcggatct acgtcatcaa tgacgttata ccaagcatca ttattgtaga ccttaggact 1860 aaggtctaaa tgaccacaca ggtaattatg tggacccaaa gatctagccc acatcgtctt 1920 accagttcta ctatcaccct ctatgacaat actcatgggt ctcaaaggcc cgccaacggc 1980 actgacaaca ttggcaagca gcccattctt caagttcttc tggaacttgg tcgaaagaag 2040 aagataaaaa aggagaaatg ttttctctat cggaggagta aaaatcctat ctaaattaga 2100 atttaaatta tgaaactgta atacaaaatc tttaggagcc ttctccttta atatattgag 2160 ggccgctgct ttggaccctg aattgattgc ctcggcatat gcgtcgttgg cagattggca 2220 acctcctcta gctgatcttc catcgatctg gaaaactcca tgatcaagca cgtctccgtc 2280 tttttccatg tatgctttaa catctgttga gcttttagct ccctgaatgt tcggatggaa 2340 atgtgctgac ctgcttgggg atgtgagatc gaagaatctg ttgttttggc atttgaattt 2400 gccttcgaac tggatgagga catgcaggtg aggagaccca tcttcgtgta gttccctgca 2460 aatacgtatg aataatttat tagtcggggt tgatagggct gaaatttggg agagtgcctc 2520 ttctttagta agggagcact gtggataagt gaggaaataa ttcttggcat ttattatgaa 2580 tttttttagc tgaggcatat tgactggtca atcgggtcct ctcaaacttg gctatgcaat 2640 cggggaatgg gtccttattt atatttgagg acctaaatgg catattcgta attattggaa 2700 tgtaattcaa aattcaaaat ccaaaagcgg ccatccgtat aatatt 2746 //