ID AF239960; SV 1; linear; genomic DNA; STD; VRL; 2682 BP. XX AC AF239960; XX DT 08-AUG-2000 (Rel. 64, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Maize streak virus - B[Vaalhart wheat], complete genome. XX KW . XX OS Maize streak virus - B[Vaalhart wheat] OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2682 RA Willment J.A., Martin D.P., Rybicki E.P.; RT "Characterization of three maize streak viruses"; RL Unpublished. XX RN [2] RP 1-2682 RA Willment J.A., Rybicki E.P.; RT ; RL Submitted (01-MAR-2000) to the INSDC. RL Microbiology, University of Cape Town, Private Bag, Rondebosch, Cape 7701, RL South Africa XX DR MD5; 2817d9cb29d087114bf257a02d2f688b. DR EuropePMC; PMC1262190; 16244707. DR EuropePMC; PMC4097777; 24789787. DR EuropePMC; PMC4148390; 25166274. XX FH Key Location/Qualifiers FH FT source 1..2682 FT /organism="Maize streak virus - B[Vaalhart wheat]" FT /isolate="VW" FT /mol_type="genomic DNA" FT /db_xref="taxon:268411" FT stem_loop 20..2655 FT gene 150..455 FT /gene="V1" FT CDS 150..455 FT /codon_start=1 FT /gene="V1" FT /product="movement protein" FT /db_xref="GOA:Q9IGZ7" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:Q9IGZ7" FT /protein_id="AAF97753.1" FT /translation="MDPQNSFFVQPRVPTAAPTSGGVSWSRVGEVAILSFVALIIFYLL FT YLWVLRDLILVLKARQGRSTEELIFGIQAVDRSNPIPNTQAPPIQGNPGPFVPGTG" FT gene 466..1200 FT /gene="V2" FT CDS 466..1200 FT /codon_start=1 FT /gene="V2" FT /product="coat protein" FT /db_xref="GOA:Q9IGZ6" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:Q9IGZ6" FT /protein_id="AAF97754.1" FT /translation="MSTSKRKRGDDSNWNKRTTKKKPSSAGLKKAGSKAERPSLQIQTL FT QHAGSTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADSQACKYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT gene complement(1363..2522) FT /gene="C1/C2" FT CDS complement(join(1363..1788,1881..2522)) FT /codon_start=1 FT /gene="C1/C2" FT /product="Rep" FT /note="replication associated protein" FT /db_xref="GOA:Q9IGZ5" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9IGZ5" FT /protein_id="AAF97756.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPHCPENPEILCQMIWELVGRWTPK FT YIICAREAHRDGDMHLHALIQTEKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSSFLGNPSKGNSEKKPSKDEIMREIISHSTSKLEYLSMVRKEFPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQPTDEGTRK FT QSLYIVGPTRTGKSTWARSLGLHNYWQNNVDWSSYNEDAIYNIVDDIPFKFCPCWKQLV FT GCQKEFVVNPKYGKKKKVQMKSKPTIILTNWDEDWMKEMTPGQMEYFEANCMIYKMSPG FT EKWYSPPVLPPTEEV" FT gene complement(1704..2522) FT /gene="C1" FT CDS complement(1704..2522) FT /codon_start=1 FT /gene="C1" FT /product="RepA" FT /note="replication associated protein A" FT /db_xref="GOA:Q9IGZ4" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9IGZ4" FT /protein_id="AAF97755.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPHCPENPEILCQMIWELVGRWTPK FT YIICAREAHRDGDMHLHALIQTEKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSSFLGNPSKGNSEKKPSKDEIMREIISHSTSKLEYLSMVRKEFPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQVSPESYML FT LQPTCYTLEEAISDLEWMDQLSSQQMKEQESRASTSSVQHEQENLLGPEA" XX SQ Sequence 2682 BP; 700 A; 625 C; 659 G; 698 T; 0 other; accgcgcctt cttttcctgc gagggcccga agggaccgag cgatttgatt taaagttcgg 60 ttctgctttg tctgatttat ctaaagcagc ccaatctaaa gaaaccggtc ccctgcgact 120 ataaattgtc tcacaagtgc gattcattca tggatccaca gaactccttc tttgtacagc 180 cgcgggtacc cacagcagct ccgacatccg gaggagtgtc gtggagtcgc gtaggcgagg 240 tagctatttt gagctttgtt gctttgatta tcttttacct gctttacctt tgggtgctga 300 gagatcttat cttagttctg aaggctcgac aaggcagatc cacggaggag ctgatatttg 360 gaatacaagc tgtggatagg agcaacccta tccctaatac acaggcacca ccaattcagg 420 ggaatcccgg gccgttcgtt ccaggcacgg gataagcaat cagccatgtc tacttccaag 480 aggaaacggg gagatgattc gaactggaat aagcggacga ctaagaagaa gccttcttca 540 gctggtctga agaaggctgg aagcaaggcc gaaaggccat cccttcagat ccagacactc 600 cagcatgctg ggtccaccat gataacagtc ccctccggag gagtatgtga cctcatcaac 660 acctatgccc gaggatcaga cgagggcaac cgccacacca gcgagactct gacgtacaag 720 attgccgtcg actaccactt cgttgcagac tcgcaagcct gcaagtattc taacaccggg 780 accggtgtga tgtggctggt gtacgacacc actcccggcg gacaagcgcc gaccccacaa 840 accatatttg catatccgga cacgctgaaa gcttggccgg caacatggaa agtgagccgg 900 gagctgtgtc atcgcttcgt ggtgaaacgg cgatggttgt tcaacatgga gaccgacggt 960 cgaattggtt cggacatccc tccttcgaat gcaagttgga agccgtgcaa gcgcaacatc 1020 tacttccaca agttcacgag tgggttggga gtgagaacgc agtggaagaa tgtaacggac 1080 ggaggagttg gtgcgataca gagaggagct ctgtacatgg tcattgcccc tggcaatggc 1140 cttacattta ctgcccatgg gcagacccgt ctgtacttta agagtgtcgg caaccagtaa 1200 tgaataaaaa ctccgtttta ttatatctga tgaatgctca aagcttacat taatatgtcg 1260 tgcgatggca cgaaaaacac actggaacgc agccccgggc taaagaccgg gtctcaagag 1320 accctgcgat acaaaacatc gaaaaaacaa gatctatatg aattacactt cctccgtagg 1380 aggaagcaca gggggagaat accacttctc ccctggcgac attttataaa tcatgcagtt 1440 tgcctcgaaa tactccatct gccctggagt catttccttc atccagtctt catcccagtt 1500 ggtgaggatg attgtaggct tagacttcat ctgaactttc ttcttcttgc catattttgg 1560 atttaccacg aactctttct gacagccaac taactgtttc caacaaggac agaatttaaa 1620 aggaatatca tctacgatgt tgtagattgc gtcttcgttg tacgaagacc aatcaacatt 1680 attttgccaa taattatgaa gccctaagct tctggcccaa gtagattttc ctgttcgtgt 1740 tggaccgacg atgtagaggc tctgctttct tgttccttca tctgttggct ggataattga 1800 tccatccatt caaggtcaga gatagcctct tcgagggtgt aacaggttgg ttgaagaagc 1860 atgtatgatt cgggactaac ctggaagatg ttaggctgga gccaatcttt gattgactca 1920 ttacaaagaa gatcaggtga agagggtgga tgaggactga tgaactcttc ctgaatctca 1980 gggaacaatt tatttgcaga gtattcaaaa tactgcaatt ttgtggccca gtcatagggg 2040 aactctttac gaaccataga gaggtactct agctttgaag tggagtgtga aataatctct 2100 ctcattattt catctttgga aggtttcttt tcagaatttc ccttggaagg atttcctagg 2160 aagcttgact tcctaggaat gaaagtacct ctctcaaaca aggccagagg ttccttgaga 2220 atgtaatccc tgaccttgtt tactgatttt gcactctgaa tgtttgggtg gaaccctttg 2280 atatcaaaga accttgagtc agtgattctt accggtttct ctgtctggat taatgcatgt 2340 aaatgcatat ctccatctct atgtgcctct cgggcacata tgatatactt cggggtccaa 2400 cgaccaacga gctcccaaat catctgacag aggatttctg gattttctgg acagtgtgga 2460 tatgttaaga acgtgttaac gttcctgtgt gagaactgac ggttggatga ggaggaggcc 2520 atatcggacg actccgagca gcttgaggga tggcaggatg ggagctccaa actctatatc 2580 aaccggttgc gccttcgaaa tccgccgctc ccccttttat agtggttgtt tatgggccgg 2640 accgggccgg cccagcagga aaagaaggcg cgcaataata tt 2682 //