ID AF238884; SV 1; linear; genomic RNA; STD; VRL; 6827 BP. XX AC AF238884; XX DT 16-OCT-2000 (Rel. 65, Created) DT 11-JAN-2001 (Rel. 66, Last updated, Version 2) XX DE Botrytis virus F, complete genome. XX KW . XX OS Botrytis virus F OC Viruses; Riboviria; Tymovirales; Gammaflexiviridae; Mycoflexivirus. XX RN [1] RP 1-6827 RX PUBMED; 11125160. RA Howitt R.L.J., Beever R.E., Pearson M.N., Forster R.L.S.; RT "Genome characterization of Botrytis virus F, a flexuous rod-shaped RT mycovirus resembling plant 'potex-like' viruses"; RL J. Gen. Virol. 82(Pt 1):67-78(2001). XX RN [2] RP 1-6827 RA Howitt R.L.J., Beever R.E., Pearson M.N., Forster R.L.S.; RT ; RL Submitted (24-FEB-2000) to the INSDC. RL HortResearch, 120 Mt Albert Rd, Auckland, New Zealand XX DR MD5; 06768985bceee5c1ccdeb593a772a329. DR EuropePMC; PMC4357927; 25595766. XX FH Key Location/Qualifiers FH FT source 1..6827 FT /organism="Botrytis virus F" FT /host="Botrytis cinerea" FT /mol_type="genomic RNA" FT /db_xref="taxon:129395" FT misc_feature 1..532 FT /note="putative 20 kDa overlapping protein" FT CDS 64..5754 FT /codon_start=1 FT /transl_except=(pos:4192..4194,aa:OTHER) FT /product="replicase" FT /note="contains readthrough stop codon" FT /db_xref="GOA:Q9DRA1" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:Q9DRA1" FT /protein_id="AAG23416.1" FT /translation="MAVPLERAFASVTQSFHKDATQGPTTNEYLVARAETQRYAPYAVR FT KGPAALLAQVGINTIHDSPLSHSHPACYALNAFHFLKVIPRYLHGKAEVWGTKDNWFRK FT LQAQIDSQTTTLTHRNYAITARDHVRYPGTVVDHPGSCTAGTLFMHDALQYMTPLDVYT FT LFATSPEMHSLVATAVIPPESVDRLPAFWPELYQLAYYEDHLCYAPDGNFADAYNQPLA FT AHQWMTMKSLHGPDFTLSVDVPASRYSHHIFVISKRPGLPDTHRDFMCPDLVELPKDFF FT PGANKADKLLPRTLVNQMVEYAASVKRATIKDATSRTRAYVKDQKYAAVTPVQQMYLSW FT FGSGLSQMQFPDRPVTPLDNFATALWYRLLPSRLYRLPATIRNFQLKAFVDQLRTPQYL FT LHFKLDEYHLSSNDKYSDFYRNESRQASSKDMLSAFEAICFGGAPELEKKILGNNNPAP FT FATVPNPPSQTALGLATITAAIAFILPNRAARLTRLVARYAIRAVKEIVNPSFLTIPRF FT GLLSHSIASWLQTDGAVITYGLAPKIASWSAPIWYNAALLAPTDMRSCQVLVDIANDLR FT FDYRYGTMRLAVTLGLTLLNPFLRRLVLLPFKVLWHSYLPSIKNKLDSMVLMSISTLPD FT NISVPLLTLRGNLNRQRCPDNKDPTPIHESDDNSTADDKCLHCPIHCLKSKLSEPAASP FT DTVPEDNPLQEGDLTEEVYAAALAKKDTPPPYPTRNDCLLVALADGLLTKRILWFSCIK FT MFGNTACWVIHDTGKAFDWMHLKMLAEQLKLNVSIEVAAEHDHHWTGLAKRVGPIDGRK FT IALRWYPYHWELSDRGREDYGPPPPPPPPSTTEPPPPPNPPAASPYHSPTVEDEPLEEI FT PLANSNGEFSTFAFDDMAADDLNPAQPLSSLDLDEEPSAKQEPLEPAAIKTSEPEPLVP FT ESEEVFFRPSPTPTPSDATPTPAARAPSSVSNENAQRPRHPLPPVPTGGASAPSNDKLN FT SAAKQYARLVAGKTRQMTVAQPRSKAYLRDLKRGNIGTIPTAEAEQLDAYIDSWAVNGF FT NRSVHVIYFCGLPGTGKSRRCMKMTERLLKENKYLAQTVRIVTPTDNLRNSVARQLKPP FT TESSYSVQTYETPIRQPSLGPVLIVDEYGKMPAGWLETVLFLNPRVQMVIFTADPTQGI FT FRTRIPDAYCCRIPSSTEAIASYAHEYRRVSDRPAPGVARALGLPTTSRRPGQIETSTE FT LNVDWITVRPEGERAAWHNTWGGKVYTYATCQGETFHRAYQMVINGNTRFWDDRDLFAA FT LTRGSGTLRLIYETQSSKPLPRSTSKLYNALLDFRTDPHKLPLAIEEHVNRYIPSHLRN FT VNQAVPRRNAASNPDALPSQRILPGGQSTTAEPXQSQASALPTGGEAIDVPALDRQDPQ FT RFPQLKVLPHLCGYIGDYSEASYPEPEHPKTQMLDATFPTYLARNRGWNDPALTDAVTA FT NYKAPEHRDIWVEAVGETTRQVHGSGDDRDVFLEHRGDDKATANITYAKRLRFSQRAAN FT ERSIAATKVAGSELFEAFTRAIPLPQETFNDSLLEECRTENDTVHLTSKPLATLINNAE FT RSDPSWSLNMIKLFIKGQTVKKLEKMGSDATAGQSIASFRAEVLLAWGPYARYIDRRIR FT ALLPPHVYIHSRRTNEDFEKFVAAHWDHTRESTDGDYTAYDASQDATFVNFETLLMRRL FT DFPLDIIEAYVEMKASITSHFGPLAIMRFSGEVWTYLFNTLGNIAFTYAKYEVPSVAQV FT YGGDDKSINSPITVRTGWSQLVGKFNLVEKPVVGYEPTFCGWRIVPGGIVKDPQLLFWR FT TRYARIRYDAALWAPGYYDELVLSLKTSDRLMDHMSPNDLAYLQALVRFYTKLSRRLPS FT LADRRRCNPLPADSPSVVLSRD" FT CDS 5848..6756 FT /codon_start=1 FT /product="coat protein" FT /note="32kDa" FT /db_xref="GOA:Q9DRA0" FT /db_xref="UniProtKB/Swiss-Prot:Q9DRA0" FT /protein_id="AAG23417.1" FT /translation="MTTSRFATFDIESETGLTPGAYPAPLPTLEQQLHDRNAILAAIPS FT LARAKLDAATLKRRFANFLLTLGMVGTTSKGSYEELIIPPVKGMGSSTGFRARELVQII FT TSSPAPPGFDGNQTLRQFARPYAPQVQNMIAQGKFKTNLYDKYGKSVGAPPHVCIDFND FT AMDLQMFHSTAEFESAHKVRELAIAEASARENAPRPAANPRAAKPIIGQTAPAFHSGDA FT AKQSGGQPVNIKPSLAQSAGFDSHRPPPETPPRAGTPSSQKSGQSGQTTIQPPASHGIL FT SGMLGSHKSTPHSSPQQTPKK" XX SQ Sequence 6827 BP; 1689 A; 2239 C; 1405 G; 1494 T; 0 other; gattaaattc acatccaaca gacacagaca ccaaacacca aacgccttaa tcgtacagcc 60 accatggctg tcccgttgga gcgtgccttc gcctcggtca cccagtcttt ccacaaagac 120 gcgacccaag gccctaccac caacgaatat ctggttgccc gcgctgaaac acaacgctat 180 gcaccatacg ccgtccgcaa aggaccggct gctctgctcg cccaggttgg tatcaatacc 240 atccatgact ccccgctgtc ccactcccac ccggcctgtt atgccctcaa tgcattccac 300 ttccttaagg ttatccctcg gtacttacat ggcaaggctg aggtttgggg caccaaagac 360 aactggttca gaaaactaca agcgcaaatt gacagccaga ccaccacgct cacacatcgg 420 aattatgcca tcaccgccag ggatcacgtc cgctaccctg gaactgtcgt cgaccatcct 480 ggatcatgca ctgctggaac actttttatg catgatgcac tacagtacat gacccctctt 540 gatgtctaca ctttgttcgc cacaagtccg gagatgcact ctctcgtcgc caccgctgtt 600 atcccgcctg aatctgttga tcgcctgccc gctttctggc ctgaacttta ccaactggca 660 tactatgagg accacctttg ctatgcacct gatgggaact tcgctgacgc ctacaaccaa 720 cccttagctg ctcaccaatg gatgaccatg aaaagtctgc acggccctga tttcacgctt 780 tccgtcgatg tacccgccag tcgttatagc caccatatct ttgtcatatc caagcgccct 840 ggtttacctg acacgcatcg tgacttcatg tgccccgact tagtcgagct gcctaaagat 900 tttttcccag gtgccaataa agcagacaag ctactccccc gcacgctggt taaccaaatg 960 gttgaatacg cagcatctgt caaacgagct accatcaaag acgccacttc caggacccga 1020 gcatatgtta aagaccaaaa atatgccgcc gtaaccccgg ttcaacagat gtacctctct 1080 tggttcggct ctggtctgtc gcaaatgcaa ttccctgacc gccctgtcac cccactggac 1140 aatttcgcca ctgccctatg gtaccgcttg ctcccttccc gcttgtaccg attacctgcc 1200 actatccgca acttccagct caaagccttt gttgatcaac tacgtacccc ccaatacctg 1260 ttgcacttca aattagatga gtaccacttg agcagcaacg acaagtacag cgacttctac 1320 cgcaatgaat caagacaagc cagcagcaaa gacatgttat cggcatttga agcaatttgc 1380 tttggcgggg cccctgaact tgaaaagaag atccttggca acaacaaccc agcaccgttc 1440 gctactgtcc ctaatccgcc gagccaaacc gctctcggac ttgccactat cactgccgca 1500 attgccttca ttctgcctaa tcgcgctgcc cgcttaaccc gcttagtcgc tcgctatgct 1560 atcagagccg tcaaggaaat tgtaaaccct tcttttttaa ccatcccccg gtttggactg 1620 ttgtcgcact caatcgccag ctggctgcaa accgatggag cggtgataac ctacggccta 1680 gctccgaaaa tcgcctcctg gtcagctcca atctggtaca acgccgccct cctcgccccc 1740 actgatatgc gatcttgcca agttttagtc gacatagcca atgatctgcg ctttgactac 1800 cgctatggaa ccatgcgact agctgttact cttggactca cacttctcaa cccgtttctg 1860 cgcagacttg ttctcttacc ctttaaagtc ctttggcata gctacctacc gtcaattaaa 1920 aacaagctgg attcaatggt tttaatgtcg atctcaaccc tgcctgacaa tataagcgtc 1980 cccctgctca cactccgcgg gaatttgaat cgccagcgat gtcccgataa caaggaccca 2040 acccctatcc atgagtctga tgacaattcc accgctgatg acaagtgctt gcactgccct 2100 attcactgcc tcaaatccaa gctttctgaa cccgccgcca gccctgacac tgtaccggaa 2160 gacaatcccc tgcaggaagg cgatctcact gaagaagtct acgcggccgc acttgcaaag 2220 aaggatactc ccccaccata tcccacccgc aatgactgcc tattagtagc attggctgac 2280 ggcctgctaa ccaagcgtat cctttggttt tcttgcatta agatgttcgg taacaccgct 2340 tgttgggtta tccatgacac tggcaaggcc tttgactgga tgcaccttaa aatgcttgct 2400 gaacagctca aactcaatgt ctccattgag gtcgctgctg aacatgacca ccattggact 2460 ggacttgcca aacgagtagg acccatcgac gggagaaaaa ttgcactccg ttggtaccct 2520 taccattggg aactctctga ccgtggacga gaagactatg gcccaccccc accaccacca 2580 cctccttcaa ccactgaacc cccgcccccg cccaaccccc ctgcagcttc accgtaccac 2640 tcaccaactg ttgaagatga gccgcttgaa gaaataccat tggctaacag caacggtgaa 2700 ttttccactt tcgcatttga tgacatggca gcagatgacc tcaatcctgc acaaccactt 2760 tcctcccttg accttgatga agagccctct gccaagcaag aacctttgga gcctgccgct 2820 attaaaacct ctgagcctga gcctttggta cctgaatctg aagaggtttt ctttcgcccc 2880 tcccctaccc caactccttc tgacgccaca cccacgccag ccgcgcgtgc accttcatcc 2940 gtgagcaatg agaacgccca gcgcccacgc catccactcc ccccggttcc aactggtggc 3000 gcctctgccc ctagcaatga caagctcaac tcggctgcta agcaatatgc tcgactcgtc 3060 gcaggtaaga ctagacaaat gactgttgcc caaccaagat ctaaagctta ccttcgcgac 3120 cttaaacgtg gcaacattgg cactatcccc accgctgaag ctgaacaact ggatgcatac 3180 atagactcct gggccgtcaa tggattcaac cgtagtgttc atgtgatata tttttgtggc 3240 ttacccggca ctggcaaatc tcgccgttgc atgaagatga ctgaacgatt acttaaggag 3300 aacaaatatt tagctcaaac ggtacgcatt gttaccccca cagacaacct acgtaacagc 3360 gtggcgagac aattgaaacc ccccactgaa agcagctact cggtacagac atatgagaca 3420 cccatccgac aaccgagcct tggacctgtc ttgatcgttg atgagtatgg taaaatgccc 3480 gccggatggc ttgaaactgt tctatttctt aatccccgtg ttcaaatggt gatcttcact 3540 gccgatccaa cccaaggcat atttcgcaca cgcatccctg acgcctattg ttgccgcatt 3600 ccctcttcta ctgaagccat tgccagttac gcccatgagt accgccgcgt cagtgataga 3660 ccagcccccg gcgttgcccg agctcttggg ctgcccacca caagtcgccg ccctggtcaa 3720 attgaaacat cgactgaact taacgttgac tggatcactg tcagacctga aggcgaacga 3780 gccgcatggc acaacacttg gggtggcaag gtttacacat acgcgacctg ccaaggtgag 3840 accttccacc gagcttacca gatggtgatc aatggcaaca cccgcttctg ggacgatcgc 3900 gaccttttcg cagcgctcac acgcggctct ggaaccctcc gcctcatcta tgagacccaa 3960 agcagcaagc ccctcccgcg aagtacttct aagctctaca acgccctctt agatttccgc 4020 actgaccccc acaagctccc cctggccatt gaagaacatg tcaaccggta catacccagc 4080 caccttcgca acgtcaacca agccgtcccg cgccgcaacg ctgccagcaa ccctgacgct 4140 ctgccaagcc agcgcatact ccctgggggc caatccacca ctgctgaacc atgacaatca 4200 caggccagcg cgctgcccac tggaggagag gccattgacg tccctgcact tgaccggcaa 4260 gacccgcaac gctttccaca gctaaaagtc ttacctcatc tttgcggtta cattggcgat 4320 tactcagaag cctcttaccc tgaacctgag caccccaaaa cgcaaatgct agacgccact 4380 ttcccaacct acctagctcg caaccgcggc tggaatgacc ctgcgctaac tgatgcggtc 4440 accgccaatt acaaggcccc tgaacaccga gacatttggg tcgaagctgt tggcgaaaca 4500 accaggcaag tacatggcag tggagatgat cgcgacgtct ttctagagca tcgcggcgat 4560 gacaaagcaa cagccaacat aacctatgcc aaacgattga ggttttctca acgcgccgct 4620 aatgaacgca gcatcgctgc cactaaggtc gccggctcag agctctttga agctttcaca 4680 cgcgcaatcc cgctccctca ggaaacgttt aatgactcgt tgctggaaga atgccgcact 4740 gaaaacgaca ctgtgcatct caccagtaag ccactcgcca cgctcatcaa caacgctgaa 4800 cgctctgacc cttcttggtc tctaaacatg atcaaactgt ttattaaggg ccaaactgtc 4860 aagaagttag aaaaaatggg ttctgatgcc accgctggac aaagcattgc ctccttccgc 4920 gcagaagtac tattggcttg gggaccttac gcccgctaca ttgaccgacg catacgagca 4980 cttctgccgc cacacgtcta catccacagc cgccgcacca atgaagattt tgagaaattc 5040 gtagctgccc actgggatca cacacgggaa tcgaccgatg gcgactacac tgcgtatgac 5100 gcttcgcagg atgcaacttt tgtcaacttt gaaaccctcc tcatgcgccg gctcgacttt 5160 cctctggaca tcattgaagc atatgtggaa atgaaagcat caataacctc acacttcggc 5220 ccacttgcca ttatgcgctt ctctggcgag gtatggacct atctttttaa cacccttggc 5280 aatattgcat ttacctatgc caagtatgag gtaccctccg tagcccaagt gtatggaggc 5340 gatgacaagt caatcaattc accaatcacc gtccgcactg gttggtcgca gcttgttggc 5400 aaatttaacc tggttgagaa acctgttgtt ggctatgaac ccactttctg cggctggcgc 5460 atcgtcccag gcggcatcgt taaagacccg caactcttat tctggcgcac acggtacgcc 5520 cgaatcaggt atgatgcagc actttgggca cccggctact atgatgaact ggtgttatca 5580 cttaaaacta gcgaccgcct gatggaccac atgagcccca atgacttagc gtatttacaa 5640 gcccttgttc gcttctacac taagctcagc cgtagactcc ccagcctcgc tgaccgccgc 5700 cgctgcaatc cactcccagc tgattctccc tctgtggtcc tgtcccgcga ctagacctca 5760 ccccacgtcc ctctaccctc cactaacccc tacacacttc accgccgacc gtatagagtt 5820 tgaaatccca acacgatatc tcacgctatg acaacatcac gcttcgccac gttcgacatt 5880 gagagcgaga ccggtttaac ccccggcgct tatcccgctc cactaccgac cctggaacaa 5940 caactgcatg accgaaacgc catacttgca gccatcccca gcctggcacg cgctaaactt 6000 gacgcggcca cactgaaaag acgtttcgcc aactttcttc tcacccttgg catggttgga 6060 acaaccagca agggcagcta tgaagaactt attatcccac cagtcaaagg catgggcagt 6120 agcacaggat ttcgagcccg cgaactggtc caaatcatca ccagttcacc tgctccccct 6180 ggctttgacg gcaatcaaac cctccgacag tttgccagac cgtatgcacc acaagtgcaa 6240 aacatgatcg cccaaggaaa gtttaagact aacttgtacg acaaatacgg caaatccgtc 6300 ggcgcaccac cccacgtgtg catcgacttc aatgatgcca tggacttgca aatgttccac 6360 tcaaccgctg aatttgaatc agcgcataaa gtccgtgaat tagccatcgc tgaagcctcc 6420 gcccgcgaga acgccccgcg cccagccgcc aacccccggg ccgccaagcc catcattggc 6480 caaaccgctc ctgcctttca tagcggcgac gcggccaaac agagtggcgg acagcctgtc 6540 aacatcaaac ccagcttggc tcaatcagcc ggctttgata gtcaccgccc accacctgag 6600 acccctcccc gagccggcac cccgagctca caaaagtcgg gccaaagtgg tcaaacgacc 6660 atccaacccc cggcctccca tgggatactt tcaggcatgc ttggatccca caagagcacc 6720 cctcactcaa gtccccaaca aacccccaag aagtgacctc cgctttcacc accgggcctc 6780 tagcggtttc ttgcccgccc agctttacac ttcgttgcac acgaggc 6827 //