ID AF233934; SV 1; linear; genomic RNA; STD; VRL; 4766 BP. XX AC AF233934; XX DT 26-APR-2001 (Rel. 67, Created) DT 26-APR-2001 (Rel. 67, Last updated, Version 1) XX DE Grapevine leafroll-associated virus 5 HSP70 gene, partial cds; and HSP90, DE coat protein, and duplicate coat protein genes, complete cds. XX KW . XX OS Grapevine leafroll-associated virus 5 OC Viruses; Riboviria; Closteroviridae; Ampelovirus; unclassified Ampelovirus. XX RN [1] RP 1-4766 RA Good X.C., Monis J.; RT "Partial nucleotide sequence, genome organization, and identification of RT grapevine Leafroll-Associated virus-5 RNA coat protein gene"; RL Unpublished. XX RN [2] RP 1-4766 RA Good X.C., Monis J.; RT ; RL Submitted (14-FEB-2000) to the INSDC. RL Agritope, 16160 SW Upper Boones Ferry Rd., Portland, OR 97224, USA XX DR MD5; 9bac24a8a5ae34f6863e74fef73bfe8c. DR EuropePMC; PMC2970810; 20703503. XX FH Key Location/Qualifiers FH FT source 1..4766 FT /organism="Grapevine leafroll-associated virus 5" FT /mol_type="genomic RNA" FT /db_xref="taxon:71032" FT CDS <1..1593 FT /codon_start=1 FT /product="HSP70" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="InterPro:IPR029047" FT /db_xref="UniProtKB/TrEMBL:Q91U93" FT /protein_id="AAK38608.1" FT /translation="GLEFGTTFSTLCFSAGRGVDGCVPESDTVYIPTVVGIRKDGTYTI FT GLGALLEKDVLVYRDIKRYFGMNKFNAEVYKKKLKPKFEVIVKNWSAYIGPSSGEKGKT FT RSVIALACMFVSALAKMAVSITGSAVKLSVCSVPAEYSSYMRNFIFQGCNLAKIQVQAV FT VNEPTAAGLSAFVTVDKNSIEYMVVYDFGGGTFDASLMAVGSSYVCVVDSLGDNYLGGR FT DVDNALLDVVVNKLNISESSLDPFSMESLKIDMVDNPLSTTRRVLTKTGEVKTLRFDNQ FT QFRGLCEPFVERARAIIEKLLKRNGVTSCVAVLIGGSSVLPGVRNSVAGLKEISRVIFD FT KETYRVAVAIGAAIYAQTFTGVSRYRLIDCVSNSLSDERQPLQAITVFPKGHPIPSTVA FT VNFKMPTYNTGVVLHEGESSFINENARTYSAPLRTSQFPGGRTYVNEFKILEDGRLDVT FT MNGVPLINEVVPERPLDEEYSEVFLSSDDKRIKPEVNDIKLFYSKILNQPSLSTKDLAA FT RREEYIKNGIVCD" FT CDS 1574..2989 FT /codon_start=1 FT /product="HSP90" FT /db_xref="InterPro:IPR004909" FT /db_xref="UniProtKB/TrEMBL:Q91U92" FT /protein_id="AAK38609.1" FT /translation="MALSATSTYVRVSKSDEGFVNLLRTFKGENDVDAFADEVLNYLDL FT RFSAISGRFSLGNYSCNTWYNGVSGAVGAWPDSEGWGRHLLANYIVSNNTLAHLYYPLA FT SEIKSAVATPMSVFTDKLSRVGKPVTETSKFPFKVSRVEAEKKAAEFGKPTKHTQDLIF FT CIGNYLGRLPTKDEVMGMTSLPVAAVRKGSLLLDVGSDVTSNERKLATLNLRGKNKQGD FT PVEGVFFKTRQTEIETVASFIFDNKIVKETLALPGVQWTILSCLKKYPVFADSFEDRID FT SLVYVQAQVRKLLDGLIPFKEDIDLDAALSSGTLLKGEVFRGDAKVLTPRFQRNTTGGL FT LMRIGSRFSVSEYSELTRKLVGALLNRNLSMDVTYTQAVLILLQRYIHYRTNALRYVNL FT PAKLDYMIKNEVKQVDFSGVDEVFFKVPRNYSGDRESVVCSPGGRGLHVFEGYWRFICQ FT VEGCARCSCTHEF" FT CDS 3285..4094 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q91U91" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q91U91" FT /protein_id="AAK38610.1" FT /translation="MSGASQNVAPALPTTSPTHETEAERKAREDKEKADLEEIQSLPVI FT QGRTTVDTFEALINSSNGVLDLSRLELPRLFNVTIPGVVSGKHKVIGARALWNLGKSKG FT ISESDKHQVQFLMQSFQDFITHSTSPKVSSSSNRTITGKYDGKEVTVAHDEIKTALDNS FT IGSFGYENTPRQFGRAFTAAIVQGISSGKLEVNTKICASHGVPPNYYPYSPDCLHVDAR FT LFGYDASLAAELGKMVAINKPSNSNRATHNLYEDTRVAPDIFLGNRR" FT CDS 4128..4751 FT /codon_start=1 FT /product="duplicate coat protein" FT /db_xref="GOA:Q91U90" FT /db_xref="UniProtKB/TrEMBL:Q91U90" FT /protein_id="AAK38611.1" FT /translation="MEVTLCLSKVKEKLPVTCDEIFYLRNAGVYATVMPPERLSFFYDK FT LSVGNNNDRNKYRELFQFLDNLGNVVATNNGNFIKFLDVDSVMEYFRRRYPDGGNLSSI FT NKTPSSDYCCLTVPALTTFLNSVCGCIEGLTTVLAVGFTRKSDTDELWSFKNTFVVFEN FT SGEISTFYGDSMDTSNSALLEVLDSFGSTSGKTDFEKVVSLLSI" XX SQ Sequence 4766 BP; 1329 A; 890 C; 1231 G; 1316 T; 0 other; ggattagagt tcggcacaac attctcaaca ctctgctttt ctgctggcag aggcgtggac 60 ggttgtgttc ctgagagtga caccgtgtat ataccaacgg tagttggtat acgaaaagac 120 ggaacataca cgataggttt gggggctttg ctagaaaagg atgtactcgt ttatcgggac 180 ataaaaagat attttggtat gaacaaattc aatgccgaag tatacaagaa aaagctaaaa 240 cctaaatttg aggtcatagt gaaaaactgg tcagcttaca ttggtccgtc ttctggagag 300 aaagggaaaa ccaggagtgt tatcgctttg gcgtgtatgt tcgtatccgc tttggcgaag 360 atggccgtgt caattactgg tagtgctgtg aaattgtctg tgtgttctgt gcctgctgag 420 tatagctcct acatgaggaa cttcattttc cagggttgta atttggctaa aattcaagtg 480 caagcagtgg tgaacgagcc gaccgcggcg ggtttaagtg cgtttgtcac cgtggacaag 540 aattccatag agtacatggt tgtctacgac ttcggaggag gtactttcga cgcctctttg 600 atggccgttg ggtcatccta cgtctgtgtc gtcgactccc tgggggacaa ttatctggga 660 gggagagatg ttgacaacgc tcttctggac gtggttgtca acaaacttaa tataagtgaa 720 agctcgttag atcccttctc tatggagtcc ttgaaaatag acatggtgga taaccctctt 780 tcaactacca gaagggtgtt gacaaaaacg ggggaggtga aaacgctgcg gtttgataac 840 caacaattta gaggtctgtg tgagcctttc gtagaaaggg cgagagcgat aatagagaaa 900 ttgctgaaac ggaatggtgt caccagctgt gtggctgtgt taataggagg ttcatcggtg 960 ttacctggtg taagaaattc cgtggctgga ctaaaggaaa tatccagggt gatattcgat 1020 aaagagactt acagagtagc ggtagctata ggggcagcca tatacgctca gacttttact 1080 ggtgtctcta gatataggtt gatagactgt gtgtctaaca gcttatctga tgaaaggcaa 1140 ccgttgcagg caataacagt tttcccaaaa gggcatccga taccgtctac tgtggcagtg 1200 aatttcaaaa tgcctactta caacaccggt gtggtgttgc atgaaggtga atcctcattc 1260 ataaatgaga acgcaaggac gtattcggca cctttgagaa catctcagtt ccccggtgga 1320 cgaacttatg ttaatgagtt caaaattttg gaggatggta gactggatgt gaccatgaat 1380 ggcgtgcctt taatcaatga agtagtgcca gagagaccct tggacgagga atactcagaa 1440 gtttttctga gttctgatga taaaagaatc aaacctgagg tcaacgatat aaaactgttt 1500 tactccaaga tcctgaacca gccatcttta agcactaaag acctggcagc gcggagagag 1560 gagtatatta agaatggcat tgtctgcgac tagcacctac gttcgggtgt cgaagagcga 1620 tgaagggttc gtcaatctgc tgagaacatt caaaggtgaa aacgacgtgg atgcgtttgc 1680 cgatgaagtt ttaaattatt tagatttaag gttttctgct atttctggca gattttcttt 1740 aggtaattat tcttgcaaca cctggtacaa tggtgtttcc ggagccgttg gagcctggcc 1800 cgactccgaa gggtggggtc gtcatttgtt ggcgaattac attgtttcta acaacacact 1860 cgcgcatctc tactatcctc tggcgagtga gataaaatct gcagtggcta ctcccatgtc 1920 tgtgtttaca gacaaattga gtagggttgg caaaccagtt accgagacat ctaagtttcc 1980 ttttaaggtg tcaagagttg aagctgaaaa gaaggcagct gagttcggaa agccaacaaa 2040 acatacccaa gatctaatat tttgtatcgg gaactatttg ggaaggttac caactaagga 2100 tgaagttatg ggtatgacgt cattgcctgt agcggctgtg cggaagggta gtttacttct 2160 ggacgttggt tcagatgtga cttcgaatga gaggaaactg gctactctaa atttgagagg 2220 aaagaacaaa caaggagatc cagtggaggg cgtgttcttc aagacgagac agacagaaat 2280 agagaccgtt gcgtctttta tttttgataa caaaatcgta aaggagacct tagcccttcc 2340 cggagtgcaa tggacgatac tgagttgcct caagaagtat ccagtttttg cagactcgtt 2400 tgaagaccgc atagacagtt tggtgtacgt acaagctcag gtcagaaaac ttttggatgg 2460 tttgataccg ttcaaagaag atatagactt agacgctgca ctcagctctg gcactctgtt 2520 gaaaggggag gtattcaggg gggacgccaa agttttgact cctaggttcc aaagaaacac 2580 cacgggcggg ctgctgatga ggataggctc aagattttct gtttcggaat attcagagct 2640 gacaagaaag ttggttggag cactcctgaa cagaaacctg tctatggatg tgacatacac 2700 tcaagcagtt ttgatattgt tacagagata tatacattac agaacaaatg ctttgagata 2760 tgtaaatctg cctgctaaat tagactatat gataaaaaat gaagtcaagc aggtggattt 2820 ctctggtgtg gatgaggtgt ttttcaaagt accaaggaac tattccggag atagagagag 2880 cgtggtgtgc tcccctggcg gacgtggctt acatgttttt gaaggatact ggcggttcat 2940 ttgccaagtg gaaggatgtg caagatgttc ctgcacacat gaattttgac ttcgtgggtt 3000 ttgtcgaccc gaagttgctg tctgaccacg aattgaagtg tcaaacacga ctgctggata 3060 ggtttaggtc aaaagatacc ccggttaggg gttttctttt gggcgcgaga aaaggaaatc 3120 cagtagatta ccttgccagt tccgccggta tcggcggaat cgaaaaggca atggtcaaga 3180 aacttatagg gtaaatggtc tacactcagt gagtgtaatg tgtttcattt tatttaagct 3240 acccttttct tgttttgtgt tttagactct tcatatagaa acagatgtct ggagcgtcgc 3300 agaacgttgc tccggcatta ccgacaacct caccaactca tgaaacagag gctgagcgga 3360 aggctagaga agataaggag aaggccgact tggaggagat acaatccctt cccgtgatac 3420 aaggtaggac aaccgtggac actttcgaag cattaatcaa tagctcgaac ggtgtactag 3480 acttgtctag gctggagctc cctaggctgt ttaatgtcac aatacctggt gttgtgtcag 3540 gtaaacataa agtgattggg gcaagagctc tctggaactt ggggaaatca aaagggatat 3600 ctgagagtga taagcatcag gtgcagttct tgatgcaatc ctttcaggat ttcataacgc 3660 actcaacgtc tcctaaggtg tccagctctt ccaatcggac tataaccggt aagtatgatg 3720 gtaaggaagt gacagttgcc catgatgaga taaagacagc tctagacaat tctatagggt 3780 ctttcggtta cgaaaacact cctagacaat ttggaagagc attcacggca gcgatagtgc 3840 aagggatatc ctcaggcaaa ctggaggtga acacgaagat ctgcgcttct cacggtgtgc 3900 cgcctaacta ctatccttac tcgccagact gtctgcatgt tgatgcaaga ctgttcggtt 3960 atgacgcttc actggcagct gagttaggca agatggttgc tatcaataaa ccttccaata 4020 gcaacagagc tacacacaat ctgtacgaag acaccagggt ggctccggac atcttcctgg 4080 gtaacaggag gtgaagtctg tgacttctac tattttcgtt tgaaaatatg gaggttactt 4140 tgtgcttgtc taaagtgaag gaaaagcttc ctgtaacttg tgatgagata ttttatttac 4200 ggaacgctgg cgtttatgcg actgttatgc cgcccgagcg tttatccttt ttctacgata 4260 agcttagcgt ggggaataat aatgatagga ataaataccg ggaactcttc cagttcttgg 4320 ataatttagg taatgtagta gctacaaata acggaaactt tataaagttt cttgatgtag 4380 attcagtcat ggagtacttc aggaggaggt accctgacgg tggtaattta tctagtataa 4440 ataaaactcc ttcgagcgat tactgttgtt taacagtacc cgctctgaca actttcttga 4500 acagcgtttg tggctgtatt gaggggctaa caactgtgtt agcggtcggt ttcactagga 4560 aaagtgatac tgatgagttg tggagtttca agaacacatt tgttgtgttt gagaactcag 4620 gagaaataag cacgttttac ggtgacagca tggacaccag taactcggcg cttctcgaag 4680 tcttggactc gtttgggtct acttcgggaa aaacagattt tgagaaggtg gttagccttc 4740 tctctatctg aatccatgtc aggcgc 4766 //