ID AF230375; SV 1; circular; genomic DNA; STD; VRL; 2780 BP. XX AC AF230375; XX DT 29-MAR-2001 (Rel. 67, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 3) XX DE East African cassava mosaic virus-[Uganda1] DNA-B, complete sequence. XX KW . XX OS East African cassava mosaic virus-[Uganda1] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2780 RX PUBMED; 11172108. RA Pita J.S., Fondong V.N., Sangare A., Otim-Nape G.W., Ogwal S., RA Fauquet C.M.; RT "Recombination, pseudorecombination and synergism of geminiviruses are RT determinant keys to the epidemic of severe cassava mosaic disease in RT Uganda"; RL J. Gen. Virol. 82(Pt 3):655-665(2001). XX RN [2] RP 1-2780 RA Pita J.S., Sangare A., Beachy R.N., Fauquet C.M.; RT ; RL Submitted (01-FEB-2000) to the INSDC. RL ILTAB, Danforth Plant Science Institute, 8001 Natural Bridge Road, St RL Louis, MO 63121, USA XX DR MD5; 8e8e278cded8abad1b06d7add0b74852. DR EuropePMC; PMC1079959; 15784145. XX FH Key Location/Qualifiers FH FT source 1..2780 FT /organism="East African cassava mosaic virus-[Uganda1]" FT /segment="DNA-B" FT /mol_type="genomic DNA" FT /note="Ug1" FT /db_xref="taxon:223270" FT CDS 366..1142 FT /codon_start=1 FT /gene="BV1" FT /product="BV1 protein" FT /db_xref="GOA:Q997C0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q997C0" FT /protein_id="AAK26739.1" FT /translation="MYSVYRRGYKTPYRSPYGARVTPYVYRKTAVKQTSKARVPRKLAY FT ESPKCLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHIKLLSLRVS FT GTVNISQCGGDDNMGERTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFGEYESVYGM FT PRLKENVRHRYRVIGTSKLYITTDEEHIQKPFSLRRRLSGGKYPMWSSFKDVDNSSTGG FT NYKNINKNAILVSYVWVSLCRSTCDVYSQFVLNYVG" FT CDS complement(1271..2194) FT /codon_start=1 FT /gene="BC1" FT /product="BC1 protein" FT /db_xref="GOA:Q997B9" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q997B9" FT /protein_id="AAK26740.1" FT /translation="MDNQFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNAIGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSS FT TYFSISEPSPWRIMYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTKDCIDFWSVEKGETRRRLLNPTPHAHSQRPITHRPITILPGETWATKSQIGLPSSSG FT PARLDHFRSQSMRMDPSTTPTDLDNDSTEYPYQKLHRLHTPELDPGDSVSQTPSDSVSR FT KDLETLLESTINKCLIKIKSEAPRQL" XX SQ Sequence 2780 BP; 778 A; 448 C; 743 G; 811 T; 0 other; taatattacc ggatggccgc gcccgaaaaa gcagggtgac cccacaatgg cccccacgca 60 ctaagtaatg tcagccaatc atgttcaaga ctggaagacg cggtagttac gtatggatga 120 gtaagtggtc ccgacgcact aatgttgaca ggcaatttga ttgctatgtg tgtatcatat 180 tcatataggt gtgttactgg ttaatctaaa gttaggtaat ggggcctatc ataaaaacgc 240 aataacatag gtacgtatgt acatattgat tatatttttg tttgcggata tatgatccgc 300 cacgtgtata atggatatgg aatgtcctat aaatatttgg catgtctctc gtccgttaat 360 gcaagatgta ttctgtttac aggcgtgggt ataagacacc gtataggagt ccgtatggcg 420 ctcgtgtaac accatatgtt tatcgtaaga ctgctgttaa acagacgtct aaagctcgtg 480 taccgcgaaa gttggcgtat gaatcgccaa aatgtctata tacgcgacgc tcattggagg 540 atatccataa tggggcttcc ttaaagttgc ctcaacaggg ggattatacg tcctatgtga 600 cactcccatg tcgaggtatc gatggtaatg ggggtaggtc tgttgatcat ataaaattat 660 taagcttgag ggtgtctggg accgtcaata tcagtcaatg cggaggtgat gataatatgg 720 gagagagaac gaccatgagg ggtatttttt tcatggcgtg tcttgttgat aagaaacctt 780 tcgttccaga gggggttagt atattgccga cgtttaatga gttgttcggg gaatatgaat 840 ccgtgtatgg catgcctagg ttgaaggaaa acgttcgtca ccggtatcgc gtgattggga 900 cgtcgaaatt atatataacg accgatgaag agcacatcca gaagccattt agtctacgtc 960 gaagactaag tggagggaaa tatcctatgt ggtcgtcgtt caaggatgtg gataatagta 1020 gtacaggtgg gaactataaa aatataaata agaacgctat actagttagt tatgtgtggg 1080 tatcgctatg tcggtccacg tgtgatgtgt attcccagtt tgtacttaat tacgtcggtt 1140 gataataaaa cgagataagt gtgttgacat taattatgtt tgaacgaacg aaatatgaga 1200 tgaacatcaa tggaaagcac atatagtgtt attatgtagc gaatcaaata tcgtacatat 1260 caagtgttta ttacaattgc ctgggtgctt cggattttat tttgatgaga cacttgttta 1320 tggtactctc aagcagtgtc tcgaggtcct ttctggatac tgagtcggat ggggtctgtg 1380 ataccgagtc ccctgggtcc aattcgggtg tgtgtaatct gtgtagtttc tggtaaggat 1440 attctgtgga gtcgttgtct aagtccgttg gtgttgtcga tgggtccatt ctcatggatt 1500 gtgaacgaaa gtggtccagc cttgcagggc cggatgagct gggtagccca atctgagact 1560 tcgttgccca tgtttctcca gggagaatgg tgatgggcct gtgggttatg ggtcgttgac 1620 tatgagcatg tggagttgga tttagtaatc tccgtcgtgt ttctcctttt tccacggacc 1680 agaagtctat gcaatccttt gtgtagccct tggataatat gttaattgtt gggggtttga 1740 aacgtatgtc cgtggaatgt ttggccgatg ataatcggag cttggccttg atggatgcga 1800 atttcacgcc ttctatgacg tttgagtctt cgactctgta catgattctc caaggggagg 1860 gttctgaaat cgaaaaatat gtagacgaga agtagtggag gtctacgttg caagctattg 1920 ggaaagtgaa tgctgcttga gcagcgtctt caaggctgac gcgattgtct ctgatttcta 1980 cgataaccga cccaattgcg ttaaatggga cctggtttcg gtattcaatt ataatgtggt 2040 cgattttcat acatcggcct ttgagtcgca tggtagcctg ctcgaatgag ctcgggaatt 2100 ggagattgat tggtgcagca tcgttggtta atgcgtactc tgtgcgtttg ctgttgatgt 2160 aattattgtc tgtgacggtg aattggttgt ccattctatg aatgaaaaaa acaagggtta 2220 gtaaacggag agaagagatg tataaaagtg agagcaagtt tataaaatgt cttgtataca 2280 tggaagcata tatgcattgg gtatcgataa taacacacta aagcagaaca aggatcatat 2340 atgtataatt ggccgcgcag cggtttggaa gtcagacaaa tctgcgaaca aataaaaaag 2400 acgaatgagg ttatgggatg gaaacaactt acggaagcac ctaggaagca gtcgggattg 2460 aattcctgtt ataagtggag aaaacaaaga aataaaagtt aacgaaataa aagtatgacg 2520 gattggtaga gaaaggaaag tgaacagatg atatgcgccg tgccgttaaa tgaaatgtta 2580 tttggtgtta tataggcgtt aataagcgag acgtggtaga gagagaaaga agagagaggc 2640 gagagcaatc gggggacact caaagtctgt agcaatcggt ggaatggggg gcattatata 2700 tgatgtcccc caatggcata tgtgtaaata ggtagacttc cattcgaaat tagaattccg 2760 aatattggcg gccatccgat 2780 //