ID AF229381; SV 1; linear; genomic RNA; STD; VRL; 3548 BP. XX AC AF229381; XX DT 27-APR-2000 (Rel. 63, Created) DT 23-MAY-2000 (Rel. 63, Last updated, Version 2) XX DE Lettuce infectious yellows virus defective RNA 2 haplotype M30 P5, coat DE protein minor, and P26 genes, complete cds. XX KW . XX OS Lettuce infectious yellows virus OC Viruses; Riboviria; Closteroviridae; Crinivirus. XX RN [1] RP 1-3548 RX DOI; 10.1006/viro.2000.0318. RX PUBMED; 10814585. RA Rubio L., Yeh H.H., Tian T., Falk B.W.; RT "A heterogeneous population of defective RNAs is associated with lettuce RT infectious yellows virus"; RL Virology 271(1):205-212(2000). XX RN [2] RP 1-3548 RA Rubio L., Yeh H.H., Tian T., Falk B.W.; RT ; RL Submitted (31-JAN-2000) to the INSDC. RL Plant Pathology, University of California Davis, 1 Shields Ave., Davis, CA RL 95616, USA XX DR MD5; b33c518d3b9352070ad5f9f7ba85aee5. XX FH Key Location/Qualifiers FH FT source 1..3548 FT /organism="Lettuce infectious yellows virus" FT /chromosome="RNA 2" FT /mol_type="genomic RNA" FT /haplotype="M30" FT /note="defective RNA segment" FT /db_xref="taxon:31713" FT CDS 327..446 FT /codon_start=1 FT /product="P5" FT /db_xref="GOA:Q9IZR0" FT /db_xref="UniProtKB/TrEMBL:Q9IZR0" FT /protein_id="AAF65756.1" FT /translation="MSILLFFLMSILVWFIFTILKVLFVNTDSEVNIPNKSRF" FT CDS 1319..2677 FT /codon_start=1 FT /product="coat protein minor" FT /note="CPm" FT /db_xref="GOA:Q9IZQ9" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q9IZQ9" FT /protein_id="AAF65757.1" FT /translation="MLEAECDEVELTSRDVGDYLMFKTRITDNFTGDLTLNINTSNLIK FT FKTCSFFICYGDDKDRYELGWTSTSTSRSIFQHYKDGKYIRDFRIQDPFPILSGSTFPV FT VISNIIANRVAFRMSRRLNNVIVDKLKNNIIEFLLVVYLDVDTGKIKPNTILKNLDLSS FT LFIVFSNNGNNKINLPYEIELQTKDRGIVYTKMGNPISYNLFNKFEDLLGIETKGVDKP FT EDKPKPVFDDKGKQPTDTVPPVDDGKPDISKPGEKQGDIDVASKFNNIVMAKLKAQSSS FT DPLTKKQCDQLMLSLIKWFEKFGITKDNARLLIFQFGISFSTSKENLNNITNNIVVEND FT KGGFVKILKIDYLNKLYGSIPESHTYNLERVLLRHYAQEILILLRSKVLEWPRKLARNK FT GIFEQYTYMACDFFDTAELELTEAETTALTTVKSWTMNHYKKKRQIVNSSQLE" FT CDS 2674..3357 FT /codon_start=1 FT /product="P26" FT /db_xref="InterPro:IPR009985" FT /db_xref="UniProtKB/TrEMBL:Q9IZQ8" FT /protein_id="AAF65758.1" FT /translation="MNNFPEIFDDESTCDYDKEIDHQELSDTFWCLMDFISSKHGKSVA FT DINSGMNTLINIRKCLNGSGKVVSIADSYNKTYFHSQRGLTNVDSRINIDILKIDFISI FT IDDLQIIFRGLIYKDKGFLDSADLLDLDKKTTTRKFQEYFNILKIKIIEKIGMTKTFHF FT NIDFRNTISPLDKQRKCSISSSHKKTNRLNDLNNYITYLNDNIVLTFRWKGVGFGGLSL FT NDIKI" XX SQ Sequence 3548 BP; 1288 A; 523 C; 657 G; 1080 T; 0 other; ggtaatcaca attaccattg ggcgaaggcc aggtgtgccg taaacctaaa atatgattgt 60 gttacggatc ctactctttt gagtagttac attatgttat gttaagatcc ttgcgtctac 120 tcttggagaa tttcgatggc acttgagtga cgtaagttac tttttctccc taaaatccaa 180 aatcccaaaa atccaaattt tagttaatag cagtagctgt cgcaaaccgt accctaccct 240 aattaaaact agactatgct gcgaatacta agagcggatt aaatctgctc gcttagagaa 300 ctctcaggtc ttctctagta taggtcatgt cgatattatt attttttctt atgtccatat 360 tagtatggtt tatttttacc attttaaagg tattatttgt aaatactgat agtgaagtaa 420 atataccgaa taaaagtaga ttttagaagt ttccatagtt tgtaataagt attttatcaa 480 taaaaagtag agtgataagt ctgttaataa aattttatta atgtgcaggt atattgtaaa 540 accaaaaata aaaacagttt ctttaagtta gaataaaagt ttttctaaaa tttaaaaatt 600 tatgtttatt ttttatttgt cgatatcgta atgatgataa gaagaaagag gaaatgaaac 660 aaaacatttc tgacaattct caaatcatat caaccaggga tcatgaagct gacatcattg 720 gaagtatatc gaaagaggat ttgtccaaaa tcgttgtacg cgtcgacagg cacgatgctc 780 tgagtgctaa tgatgttcaa agttttagag aagctatgat aaacttcatg cgagacaaag 840 accccaacag aaatcaacct agtgacaaat tgattattgc tatggaagtt ggagtttatc 900 aaatggtcat aaatttgggc acttcggcta aattgggtaa tgctaacaat ttagaattta 960 cgatagctta cgaccaggaa actaggacat ataaggtcgc agattttgtg aattatatgc 1020 agtctagaat gaggaacagt ccaaatgttg ttaggcaata tgcaagagca atggaaaaga 1080 caattaacaa cataaggagt gctggaatca taaacagcaa tggagttttg gcagcgaaac 1140 atggtgtgtt ggcatcttac agaaactctt acagcgactt tgctgttggt tttggtaacg 1200 acaccactga tgctcaactc acttcgctaa tgctagctag aaaacaagca ttatgcaaag 1260 gtgaaggtgg ttcagtcgag cattacaata ctatgcagtt agctaacctt aaacatccat 1320 gttagaggcg gaatgtgatg aagtagaact aacctccaga gatgtcggag attatttgat 1380 gttcaaaacg agaataaccg ataatttcac tggagattta accttgaata taaacacctc 1440 gaacttaatc aaattcaaaa cttgtagttt ctttatatgt tatggagacg acaaggatag 1500 gtatgaattg ggttggactt caacatctac atctagaagt atttttcaac attataagga 1560 tggtaaatac attcgagatt ttagaataca agatccattt ccaattctat caggttcaac 1620 atttccagta gtgatttcta atataatagc gaatagggtt gcctttcgta tgagtagaag 1680 attaaataat gttattgttg ataagcttaa gaataacatt atagagtttc tacttgtagt 1740 atatttagat gtggatactg ggaagattaa accaaacaca atactcaaaa atttagattt 1800 gtccagtctt tttatcgttt tcagtaacaa cggaaacaat aaaatcaatc taccatatga 1860 gatagagcta cagactaaag atagaggcat tgtttacaca aaaatgggta atcctatatc 1920 ttataacctc ttcaataagt ttgaagattt attaggcata gaaaccaaag gtgtcgataa 1980 acccgaagac aaacccaaac ctgtgtttga cgacaaaggc aagcaaccca cggatacggt 2040 tcctcctgtt gacgatggca agcccgacat aagcaaacct ggtgagaaac agggagacat 2100 agatgttgct agcaagttta ataatatagt catggcaaaa ttgaaagctc aatcttcatc 2160 agatccattg acgaaaaagc aatgtgatca attgatgttg agtctaatca aatggtttga 2220 aaaatttgga atcacaaaag acaatgcccg attgctgata tttcaatttg gtatatcttt 2280 ttcgacttca aaagaaaatc ttaacaatat cactaacaat attgttgtag agaatgacaa 2340 aggtgggttt gtaaaaattt taaaaataga ttacttgaac aaactgtacg gttcgattcc 2400 tgagtcgcat acttacaatt tagaaagagt tctactaaga cattatgctc aagaaatctt 2460 aatattacta agaagcaaag tgttagaatg gcctaggaaa ttagcaagaa ataagggcat 2520 tttcgaacaa tatacctaca tggcctgtga ctttttcgac accgcagaat tagaattgac 2580 ggaggctgag accacagctt tgacgacggt aaagtcttgg actatgaacc attataagaa 2640 gaaaagacag atagttaata gttcacaatt agaatgaata attttcctga aatttttgat 2700 gatgagtcca catgcgacta tgataaagag atagatcacc aagaactatc agataccttt 2760 tggtgtttga tggatttcat ctcttctaaa catgggaaaa gtgtcgctga tataaattca 2820 gggatgaata ctttgattaa cattagaaag tgcctcaatg gaagtggtaa agttgtgtcg 2880 atagctgata gttacaataa aacttatttc cacagtcaaa gaggattgac caatgttgac 2940 tcaaggataa acatagatat attgaagata gatttcatta gtattattga cgatcttcaa 3000 ataatattta gaggtttaat ttacaaagat aaaggttttc tagatagtgc ggacttgtta 3060 gatttagata agaaaacaac tactagaaaa tttcaagaat atttcaatat tctaaaaata 3120 aaaatcatag agaaaattgg aatgacaaaa acattccatt tcaatataga ttttagaaac 3180 acgatctctc ctttagataa gcaaaggaaa tgttcaattt caagttctca taagaaaacc 3240 aacagattga acgatctcaa taattatata acatatctaa atgataatat tgtgttgaca 3300 tttagatgga aaggagtagg attcggagga ctatcattaa atgatataaa aatttaaaac 3360 acaagcgggt aagttggata aggtaatatc cgcaaggtcg aatagggttt gtattaatca 3420 gactatttgt aaatccttaa aagagacatg aacgataatt caatttgatc agagagtggt 3480 gattgaatta ttcgatgata aatggtttaa aaccatttat cattctagtg tatctcgtat 3540 actagacc 3548 //