ID AF229370; SV 1; linear; genomic RNA; STD; VRL; 3109 BP. XX AC AF229370; XX DT 27-APR-2000 (Rel. 63, Created) DT 23-MAY-2000 (Rel. 63, Last updated, Version 2) XX DE Lettuce infectious yellows virus defective RNA 2 haplotype M18 coat protein DE minor and P26 genes, complete cds. XX KW . XX OS Lettuce infectious yellows virus OC Viruses; Riboviria; Closteroviridae; Crinivirus. XX RN [1] RP 1-3109 RX DOI; 10.1006/viro.2000.0318. RX PUBMED; 10814585. RA Rubio L., Yeh H.H., Tian T., Falk B.W.; RT "A heterogeneous population of defective RNAs is associated with lettuce RT infectious yellows virus"; RL Virology 271(1):205-212(2000). XX RN [2] RP 1-3109 RA Rubio L., Yeh H.H., Tian T., Falk B.W.; RT ; RL Submitted (31-JAN-2000) to the INSDC. RL Plant Pathology, University of California Davis, 1 Shields Ave., Davis, CA RL 95616, USA XX DR MD5; 008dd6c8cfea6e445862f969c56d13c5. XX FH Key Location/Qualifiers FH FT source 1..3109 FT /organism="Lettuce infectious yellows virus" FT /chromosome="RNA 2" FT /mol_type="genomic RNA" FT /haplotype="M18" FT /note="defective RNA segment" FT /db_xref="taxon:31713" FT CDS 880..2238 FT /codon_start=1 FT /product="coat protein minor" FT /note="CPm" FT /db_xref="GOA:Q9IZR5" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q9IZR5" FT /protein_id="AAF65744.1" FT /translation="MLEAECDEVELTSRDVGDYLMFKTRITDNFTGDLTLNINTSNLIK FT FKTCSFFIRYGDDKDRYELGWTSTSTSRSIFQHYKDGKYIRDFRIQDPFPILSGSTFPV FT VISNIIANRVAFRMSRRLNNVIVDKLKNNIIEFLFVVYLDVDIGKIKPNTILKNLDLSS FT LFIVFSNNGNNKINLPYEIELQTKDRGIVYTKMGNPISYNLFNKFEDLLDIETKGVDKP FT EDKPKPVFDDKGKQPTDTVPPVDNGKPDISKPGEKQGDIDIASKFNNIVMAKLKAQSSS FT DPLTKKQCDQLMLSLIKWFEKFGITKDNARLLIFQFGISFSTSKENLNNITNNIVVEND FT KGGFVKILKIDYLDKLYGSIPESHTYNLERVLLRHYAQEILILLRSKVLEWPRKLARNK FT GIFEQYAYMACDFFDTAELELTEAETTALTTVKSWTMNHYKKKRQIVNSSQLE" FT CDS 2235..2918 FT /codon_start=1 FT /product="P26" FT /db_xref="InterPro:IPR009985" FT /db_xref="UniProtKB/TrEMBL:Q9IZR4" FT /protein_id="AAF65745.1" FT /translation="MNNFPEIFDDESTCDYDKEIDHQELSDTFWCLMDFISSKHGKSVA FT DINSGMNTLINIRKSLNGSGKVVSITDSYNKTYFHSQRGLTNVDSRINIDILKIDFISI FT IVDLQIIFRGLIYKDKGFLDSADLLDLDKKTTTRKFQEYFNILKIKIIEKIGMTKTFHF FT NIDFRNTISPLDKQRKCSISSSHKKTNRLNDLNNYITYLNDNIVLTFRWKGVGFGGLSL FT NDIKI" XX SQ Sequence 3109 BP; 1126 A; 482 C; 586 G; 915 T; 0 other; ggtaatcaca attaccattg ggcgaaggcc aggtgtgccg taaacctaaa atatgattgt 60 gttacggatc ctactctttt gagtagttac attatgttat gttaagatcc ttgcgtctac 120 tcttggagaa tttcgatggc acttgagtga cgtaagttac tttttctccc taaaatccaa 180 aatcccaaaa atccaaattt tagttaatag cagtagctgt cgcaaaccgt accctaccct 240 aattaaaact agactatgct gcgaatacta agagcggatt aaatctgctc gcttagagga 300 tttgtccaaa atcgttgtac gcgtcgacag gcacgatgct ctgagtgcta atgatgttca 360 aagttttaga gaagctatga taaacttcat gcgagacaaa gaccccaaca gaaatcaacc 420 tagtgacaaa ttgattattg ctatggaagt tggagtttat caaatggtca taaatttggg 480 cacttcggct aaattgggta atgctaacaa tttagaattt acgatagctt acgaccagga 540 aactaggaca tataaggtcg cagattttgt gaattatatg cagtctagaa tgaggaacag 600 tccaaatgtt gttaggcaat atgcaagagc aatggaaaag acaattaaca acataaggag 660 tgctggaatc ataaacagca atggagtttt ggcagcgaaa catggtgtgt tggcatctta 720 cagaaactct tacagcgact ttgctgttgg ttttggtaac gacaccactg atgctcaact 780 cacttcgcta atgctagcta gaaaacaagc attatgcaaa ggtgaaggtg gttcagtcga 840 gcattacaat actatgcagt tagctaacct taaacatcca tgttagaggc ggaatgtgat 900 gaagtagaac taacctccag agatgtcgga gattatttga tgttcaaaac gagaataacc 960 gataatttca ctggagattt aaccttgaat ataaacacct cgaacttaat caaattcaaa 1020 acttgtagtt tctttatacg ttatggagac gacaaggata ggtatgaatt gggttggact 1080 tcaacatcta catctagaag tatttttcaa cattataagg atggtaaata cattcgagat 1140 tttagaatac aagatccatt tccaatacta tcaggttcaa catttccagt agtgatttct 1200 aatataatag cgaatagagt tgcctttcgt atgagtagaa gattaaataa tgttattgtt 1260 gataagctta agaataacat tatagagttt ctatttgtag tatatttaga tgtggatatt 1320 gggaagatta aaccaaacac aatactcaaa aatttagatt tgtccagtct ttttatcgtt 1380 ttcagtaaca acggaaacaa taaaatcaat ctaccatatg agatagagct acagactaaa 1440 gatagaggca ttgtttacac aaaaatgggt aatcctatat cttataacct cttcaataag 1500 tttgaagatt tattagacat agaaaccaaa ggtgtcgata aacccgaaga caaacccaaa 1560 cctgtgtttg acgacaaagg caagcaaccc acggatacgg ttccccctgt tgacaatggc 1620 aagcccgaca taagcaaacc tggtgagaaa cagggagaca tagatattgc tagcaagttt 1680 aataatatag tcatggcaaa attgaaagct caatcttcat cagatccatt gacgaaaaag 1740 caatgtgatc aattgatgtt gagtctaatc aaatggtttg aaaaatttgg aatcacaaaa 1800 gacaatgccc gattgctgat atttcaattt ggtatatctt tttcgacttc aaaagaaaat 1860 cttaacaata tcactaacaa tattgttgta gagaatgaca aaggtgggtt tgtaaaaatt 1920 ttaaaaatag attacttgga caaactgtac ggttcgattc ctgagtcgca tacttacaat 1980 ttagaaagag ttctactaag acattatgct caagaaatct taatattact aagaagcaaa 2040 gtgttagaat ggcctaggaa attagcaaga aataaaggca ttttcgaaca atatgcctac 2100 atggcctgtg actttttcga caccgcagaa ttagaattga cggaggctga gaccacagct 2160 ttgacgacgg taaagtcttg gactatgaac cattataaga agaaaagaca gatagttaat 2220 agttcacaat tagaatgaat aattttcctg aaatttttga tgatgagtcc acatgcgact 2280 atgataaaga gatagatcac caagaactat cagatacctt ttggtgtttg atggatttca 2340 tctcttctaa acatgggaaa agtgtcgctg atataaattc agggatgaat actttgatta 2400 acattagaaa gagcctcaat ggaagtggta aagttgtgtc gataactgat agttacaata 2460 aaacttattt ccacagtcaa agaggattga ccaatgttga ctcaaggata aacatagata 2520 tattgaagat agatttcatt agtattattg tcgatcttca aataatattt agaggtttaa 2580 tttacaaaga taaaggtttt ctagatagtg cggacttgtt agatttagat aagaaaacca 2640 ctactagaaa atttcaagaa tatttcaata ttctaaaaat aaaaatcata gagaaaattg 2700 gaatgacaaa aacattccat ttcaatatag attttagaaa cacgatctct cctttagata 2760 agcaaaggaa atgttcaatt tcaagttctc ataagaaaac caacagattg aacgatctca 2820 ataattatat aacatatcta aatgataata ttgtgttgac atttagatgg aaaggagtag 2880 gattcggagg actatcatta aatgatataa aaatttaaaa cacaagcggg taagttggat 2940 aaggtaatat ccgcaaggtc gaatagggtt tgtattaatc agactatttg taaatcctta 3000 aaagagacat gaacgataat tcaatttgat cagagagtgg tgattgaatt attcgatgat 3060 aaatagtcta aaaccattta tcattctagt gtatctcgta tactagacc 3109 //