ID   AF228516; SV 1; linear; genomic RNA; STD; VRL; 1707 BP.
XX
AC   AF228516; DQ098899;
XX
DT   04-FEB-2001 (Rel. 66, Created)
DT   26-JUL-2005 (Rel. 84, Last updated, Version 2)
XX
DE   Hibbertia virus Y polyprotein gene, partial cds.
XX
KW   .
XX
OS   Hibbertia virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1707
RX   DOI; 10.1016/S0166-0934(96)02103-9.
RX   PUBMED; 9015271.
RA   Gibbs A., Mackenzie A.;
RT   "A primer pair for amplifying part of the genome of all potyvirids by
RT   RT-PCR";
RL   J. Virol. Methods 63(1-2):9-16(1997).
XX
RN   [2]
RP   1-1707
RA   Mackenzie A.M., Gibbs A.J.;
RT   "Potyviruses in Australia";
RL   Unpublished.
XX
RN   [3]
RP   1-1707
RA   Mackenzie A.M., Gibbs A.J., Wei K.-J.;
RT   ;
RL   Submitted (24-JAN-2000) to the INSDC.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra, ACT 2601, Australia
XX
RN   [4]
RC   Sequence update by submitter
RP   1-1707
RA   Mackenzie A.M., Gibbs A.J.;
RT   ;
RL   Submitted (21-JUL-2005) to the INSDC.
RL   Botany and Zoology, Australian National University, Canberra, ACT 2601,
RL   Australia
XX
DR   MD5; 740369dea90a389ce4a65c7f6f5b4bf8.
XX
CC   On Jul 21, 2005 this sequence version replaced gi:70780007.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1707
FT                   /organism="Hibbertia virus Y"
FT                   /host="Hibbertia scandens"
FT                   /strain="Kioloa"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:New South Wales"
FT                   /note="HVY"
FT                   /db_xref="taxon:114892"
FT   CDS             <1..1467
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains partial NIb polymerase and complete coat
FT                   protein"
FT                   /db_xref="GOA:Q99HQ2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q99HQ2"
FT                   /protein_id="AAK00712.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVVSVYYSCIKLGWTEADIRNQLVFFANG
FT                   DDIILAVPTNCEYLYDAMGESFMELGLNYDFSERTQQREDLWFMSHQAKEIEGVYIPKL
FT                   EMERIVSILEWDRSKELMHRTEAICAAMIEAWGHTELLQEIRKFYMWLIQKSEFKELAL
FT                   LGKTPYIAETALKKLYTDKDATQEEIEAYLKVLCMHRDECNEAVSLQSKREETIDAGVE
FT                   KEQTTGKKAVGSSSDTEKNKEKGGSGVVKDKDVNAGSKGSVVPRLQRITKKMNLPMVKG
FT                   NMILNLEHLIEYKPDQTKLFNTRATDSQFAAWYEGIKEKYEVDDNQMSVIMNGFMVWCI
FT                   DNGTSPDINGVWVMMDGNEQIEYPLKPMVENAKPILRQIMHHFSDAAEAYIEMRCASGP
FT                   YMPRYGLLRDLRDKNLARYAFDFYEVNVKTSDRAREAVAQMKAAALSNVTNKLFGLDGN
FT                   VATTSEDTERHTARDVSQNMHSLLGMGSMQ"
FT   3'UTR           1468..1707
XX
SQ   Sequence 1707 BP; 546 A; 302 C; 418 G; 441 T; 0 other;
     ggaaacaata gtgggcagcc atcaactgtt gtggataata cattgatggt cgtggtttca        60
     gtatactact catgcatcaa acttggttgg acagaggctg atattcgaaa tcaactggtc       120
     ttctttgcaa atggtgatga catcattcta gcggttccaa caaattgtga atacctctat       180
     gatgcaatgg gagaatcctt tatggaactt ggtctcaact atgattttag tgagagaact       240
     caacagagag aagatttatg gttcatgtca caccaggcga aagaaattga aggagtttac       300
     attccgaaac tcgaaatgga aagaatagta tccatacttg aatgggacag aagtaaggag       360
     ttaatgcatc gcactgaagc gatatgcgct gcaatgattg aagcatgggg gcacacagaa       420
     ttgctacagg agatacggaa gttttacatg tggttgattc agaagagtga gtttaaggaa       480
     ttggctttac ttggaaagac cccttatatt gctgagacag cgctaaagaa gctctatacg       540
     gacaaggatg caacacaaga ggagattgag gcatacctca aagttttatg tatgcaccga       600
     gatgaatgta acgaagcagt gtctttacaa tccaagagag aggaaaccat tgacgcagga       660
     gttgagaaag agcaaacgac tggtaagaaa gccgtgggga gtagtagtga cactgagaaa       720
     aacaaggaga agggaggttc tggtgtggtc aaggacaaag atgtgaacgc aggatccaaa       780
     ggaagcgttg tcccacgttt acagagaatt acgaagaaaa tgaacctacc aatggtaaag       840
     ggaaacatga ttctgaatct tgagcacctt attgaatata aaccggacca aaccaaacta       900
     ttcaatacac gggcaactga tagccaattt gcagcttggt atgaaggtat caaggaaaag       960
     tatgaggtgg atgacaacca gatgtcagtc atcatgaacg gctttatggt ttggtgcatt      1020
     gacaacggaa cttctcctga cataaatgga gtttgggtga tgatggatgg taacgagcag      1080
     attgaatatc ctcttaaacc aatggttgag aatgccaaac caattcttcg acaaataatg      1140
     caccattttt cagacgcagc tgaagcatac attgaaatga gatgcgctag tggtccgtac      1200
     atgcctaggt atggtctctt gcgcgatctg cgggataaga acttagcacg atatgcattt      1260
     gacttttatg aagttaatgt gaaaacctct gatcgtgctc gagaagcagt agcccaaatg      1320
     aaggctgcgg cactgagcaa cgttactaac aagttgtttg gacttgatgg gaatgttgca      1380
     acaaccagcg aagacactga aaggcacact gcacgcgatg ttagccaaaa catgcattca      1440
     cttcttggca tgggctcaat gcagtaaaga gcaagtaaat tgttcatagt tatagcttcg      1500
     ctatcgctct agattttaga atatatttcc attctcttta gcgtggttat actaccttta      1560
     ctcgagtttg agtgtggctt tgccatgtgt gtgaaatatt tctttatatc aaagcaggga      1620
     ggatcatgcc aattccggag ctttcagagt gattctatca cgtgcactgt ccgaggttcg      1680
     gcaatgttta tcgtcccaaa aaaaaaa                                          1707
//