ID AF226161; SV 1; linear; mRNA; STD; VRL; 2944 BP. XX AC AF226161; XX DT 07-FEB-2001 (Rel. 66, Created) DT 16-OCT-2003 (Rel. 77, Last updated, Version 3) XX DE Tulare apple mosaic virus segment RNA2, complete sequence. XX KW . XX OS Tulare apple mosaic virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-2944 RX DOI; 10.1007/s00705-003-0148-z. RX PUBMED; 14551826. RA Scott S.W., Zimmerman M.T., Ge X.; RT "Viruses in subgroup 2 of the genus Ilarvirus share both serological RT relationships and characteristics at the molecular level"; RL Arch. Virol. 148(10):2063-2075(2003). XX RN [2] RP 1-2944 RA Scott S.W., Zimmerman M.T., Ge X.; RT ; RL Submitted (19-JAN-2000) to the INSDC. RL Plant Pathology & Physiology, Clemson University, P.O. Box 340377, Clemson, RL SC 29634-0377, USA XX DR MD5; a4ba6b19593bbe1cb97ebcbc24cd8373. XX FH Key Location/Qualifiers FH FT source 1..2944 FT /organism="Tulare apple mosaic virus" FT /segment="RNA2" FT /mol_type="mRNA" FT /db_xref="taxon:151043" FT CDS 81..2510 FT /codon_start=1 FT /product="putative polymerase p2" FT /db_xref="GOA:Q99HR0" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q99HR0" FT /protein_id="AAK01482.1" FT /translation="MATHVLDLVSTCVLRDALQLHASFCLDPTPELNFYFRLWVLREVV FT VPTMKVFWDADALLGRLETVFSLEEPCFPNPIVYDASMPLLSYDDEFGEVPDEAYLSPE FT EREEIHKPKFLTHEHWGSESSGSVSLEDVKCLYDESVFDDIMQDVNSDMPKDYEIMWND FT GAIDAVWSSRFEVEEPPKPKFRPQLTDKVCDPVIIQDAINDIFPFHHEMDDTYFQTWVE FT TQDISLEVSKCWIDASNFKDFTKGQSTYAVPTYQSGATSKRVNTQRETVLAVKKRNMNI FT PELQATFDLDAEVRACFKRFCTHVVDIPRVKRLPQMMGTEIEFFNAYLQGKNPPLSEYR FT GPLTLQSLDKYMHMVKTIVKPVEDNSLKFERPLCATITYHKKGIVMQSSPLFLSAMSRL FT FYVLKSKIHIPSGKWHQLFTLDAACFDAAQWFKEVDFSKFDKSQGELHHKVQKLIFDLL FT KLPPEFVEMWFTSHERSHITDRDVGVGFSVDFQRRTGDANTYLGNTLVTLMCLARVYDS FT CDPKITFVIASGADSLLGSVEELPRTPEHLFTSLFNFEAKFPHNQPFICSKFLVSVDLA FT DGGREVIAVPNPAKLLIRMGRRDCQYQALDDLYNSWLDVIYYFRDSRVCEKVAELCAYR FT QTRRSSMYLLSALLSLPSCFANLKKFKRLCYNLTEEECLKKAKTGRNTRDNVERDKHVR FT GCRIEVAQNKDGKCPRRKSRGCWKYIPKFSVQDRSGTVPDTASLTGIRGKVDVDKIPTS FT PRCGDTGSREFGSSSRTRSSIGSEDSRPRHRFRAKGFHQPSSCHTGHLPPSDRRST" FT CDS 2137..2739 FT /codon_start=1 FT /product="putative 2b protein" FT /db_xref="UniProtKB/TrEMBL:Q99HQ9" FT /protein_id="AAK01483.1" FT /translation="MLREINMFEDAELKLHKIKMGSAHGVNRVDVGSIFPNFQSRTVLV FT LFLILLLSQVSEARWMLIKSPPVPAVVTPAVVSSEAAPEPEARLVVKIPDLAIDFELRD FT FTNPAVVIQDIYRRVIGEVPKGWYGLKSWSISSYRDVYSRLCVVRKMKVHLTIPGSDWA FT YTLSLSDVLSGLAVPKLPIPEKYLKMPITINFRDEMR" XX SQ Sequence 2944 BP; 766 A; 596 C; 681 G; 901 T; 0 other; gttggtattg cgaatcatta ttttgatcgc gacccggatt aatcagagtt tttctctgag 60 tatatacccg ttagcactca atggcaactc atgttttgga cctagtgtct acttgtgttt 120 tgcgtgacgc tttgcagttg catgcctcct tctgtttgga tcccacacct gaacttaatt 180 tctatttccg tttatgggtt ttacgagagg ttgtggttcc aacaatgaaa gtcttctggg 240 acgctgatgc gttgctaggt agattggaga cggtcttctc gctcgaagaa ccatgttttc 300 ccaatcccat cgtttacgat gcttcgatgc cgttgcttag ttacgatgat gaatttggtg 360 aagtacctga tgaagcgtat ctttcaccag aagaacgaga agagatccac aaacccaaat 420 tcttgactca tgaacactgg ggtagtgagt cgtctggctc agtgtctctt gaagatgtca 480 aatgcctcta tgatgagagt gtttttgatg acattatgca ggatgtcaat tccgacatgc 540 ccaaagatta tgaaatcatg tggaatgatg gggcgatcga tgctgtttgg tcgagtcgat 600 ttgaggtgga agagcctcca aaaccaaagt ttcgaccaca attgaccgac aaagtttgcg 660 atcccgtgat tatccaggat gcaatcaatg atattttccc atttcatcat gagatggatg 720 atacttattt ccagacgtgg gttgaaacac aggatatttc ccttgaagtt tcaaaatgtt 780 ggattgatgc ttcaaatttt aaggatttta ccaagggaca atcgacgtat gcggtaccca 840 cgtatcaatc tggtgccact agcaagaggg ttaacactca acgtgaaact gtcttagctg 900 tgaagaagcg gaatatgaat atacctgaac ttcaagctac cttcgatctc gatgctgaag 960 taagagcatg cttcaaaaga ttttgcacgc atgttgtgga tataccgaga gtgaagagat 1020 tgccacagat gatgggaact gaaattgaat tttttaatgc ctatttgcag ggtaagaatc 1080 ccccactatc tgaataccgc gggcctttga ctttgcagtc attggataag tacatgcata 1140 tggttaaaac cattgtaaag cccgtcgaag ataattcttt gaagttcgag agaccgcttt 1200 gtgccactat tacctatcac aaaaaaggta tagtgatgca gtcatctccg ttgtttttga 1260 gtgctatgtc ccgacttttt tacgtgctta agtcgaagat tcatataccg agtggtaagt 1320 ggcatcaact tttcacactc gatgcggcat gtttcgatgc ggcccaatgg tttaaagaag 1380 tagatttctc gaagtttgat aagtctcagg gagagttgca tcataaagtt cagaaattaa 1440 tttttgactt gttgaaatta cctcctgagt ttgtggagat gtggtttacc tcccatgaga 1500 gatctcacat tactgatcgt gatgttggag tggggttctc tgtcgatttc caaagaagaa 1560 ctggagatgc taatacgtat ctgggtaata cattggttac cctgatgtgt ttagctagag 1620 tgtatgactc atgtgatcct aaaatcacgt tcgtcattgc ctcgggagct gattcactcc 1680 ttggctctgt tgaagaatta ccacgaactc ctgaacatct cttcaccagt ctttttaact 1740 ttgaggcaaa attcccgcat aatcaacctt ttatctgttc gaagttctta gtttctgttg 1800 atttagcgga tgggggtcga gaagttattg ccgtcccgaa ccctgctaaa ctcctcattc 1860 gcatgggccg tcgtgattgt cagtaccaag ccttagatga tctttataat tcctggcttg 1920 atgttattta ttatttccgt gattcccggg tttgtgagaa agtggcggag ctttgtgcat 1980 atcgtcaaac ccgaaggtct tcgatgtatc tgctcagtgc tttactgagc ttgcctagtt 2040 gtttcgcaaa tttaaaaaaa tttaaacgcc tctgttacaa tttgacagag gaagagtgtc 2100 tgaagaaagc gaaaactgga agaaataccc gcgacaatgt tgagagagat aaacatgttc 2160 gaggatgccg aattgaagtt gcacaaaata aagatgggaa gtgcccacgg cgtaaatcgc 2220 gtggatgttg gaagtatatt cccaaatttt cagtccagga ccgttctggt actgttcctg 2280 atactgcttc tctcacaggt atcagaggca aggtggatgt tgataaaatc cccaccagtc 2340 cccgctgtgg tgacaccggc agtcgtgagt tcggaagcag ctcccgaacc agaagctcga 2400 ttggtagtga agattccaga cctcgccata gatttcgagc taagggattt caccaaccca 2460 gcagttgtca tacaggacat ctaccgccga gtgatcggcg aagtacctaa gggttggtat 2520 ggtttgaagt cttggagtat ttcctcttat agagacgttt actcaaggct atgtgtcgtt 2580 cgtaagatga aggtccatct taccattcca ggttctgatt gggcttatac cctttcatta 2640 tctgatgttc tttctgggtt ggctgtaccc aagttgccaa ttcctgagaa atatctcaag 2700 atgcctatca cgattaattt ccgtgatgag atgcgttaat ttattaacaa gtgtaacttt 2760 catgttacct agtgaagggt cctccgggat gtgctcagca cctagcctaa gccaagttca 2820 tatgcccacc tttgcttgtc tccgggtgga tgcctcatgg tgctatggat gcctataact 2880 gaaatgttat agatgcctaa tttctctctc ttgagagaaa ttagatgcct ccaaagggag 2940 aagc 2944 //