ID AF226160; SV 1; linear; mRNA; STD; VRL; 3459 BP. XX AC AF226160; XX DT 07-FEB-2001 (Rel. 66, Created) DT 16-OCT-2003 (Rel. 77, Last updated, Version 3) XX DE Tulare apple mosaic virus segment RNA1, complete sequence. XX KW . XX OS Tulare apple mosaic virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-3459 RX DOI; 10.1007/s00705-003-0148-z. RX PUBMED; 14551826. RA Scott S.W., Zimmerman M.T., Ge X.; RT "Viruses in subgroup 2 of the genus Ilarvirus share both serological RT relationships and characteristics at the molecular level"; RL Arch. Virol. 148(10):2063-2075(2003). XX RN [2] RP 1-3459 RA Scott S.W., Zimmerman M.T., Ge X.; RT ; RL Submitted (19-JAN-2000) to the INSDC. RL Plant Pathology & Physiology, Clemson University, P.O. Box 340377, Clemson, RL SC 29634-0377, USA XX DR MD5; d1428a2e541d1925112ef9ef0f86b75b. XX FH Key Location/Qualifiers FH FT source 1..3459 FT /organism="Tulare apple mosaic virus" FT /segment="RNA1" FT /mol_type="mRNA" FT /db_xref="taxon:151043" FT CDS 72..3254 FT /codon_start=1 FT /product="viral replicase p1" FT /db_xref="GOA:Q99HR1" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q99HR1" FT /protein_id="AAK01481.1" FT /translation="MDSVVEHASSVLRLDDLLNDVVRRNAANAATDVGRLISDAAVNVV FT RRQVDLTPAKPLNVSFALTPEDQNALRRDFPGRELQFRNSASSSHAVMQLRTVLCRDRT FT IFIVRFSKPETTTIIDIGGNFCTHAKMGRENVHSCCPILDVRDGARFTDRFMSIAGALE FT KQPERELRLNYCDHKFEDCDVSAPWAMAIHSISDIPITTVVKHCFPRGVKKLIASVMMD FT PMMLIATEGFIPRLNVHWEIETIDKERIISFHFIDAPGLSYTHNYDVLMQYMTCNQVIV FT AGKAAYRVERVADLSGVFIVEITLASTNKDRLDLIPMRDVSCAWMSSLRRKTLVRIAIP FT QLKNSWEIKHVIMDTDFVRRVAEVSFRQYKSETPIENLVQSVATMISSASNHCVINGVT FT MQTGSPVPIDHYVPLAVTFVAYARSRYRMVKPAMEMVRQRGVSIIDPDANVDYVHDKGE FT VIATGNAVKTAIKGLLFPTRTKMNDNSTLIYSCPILESVVDEIKTVLGWDVWSTDDAVI FT SSLPSFYKMEDVFEVTSEHYCLSHTLNVDYWLEGLYDSYDELRKVHKKKLMEEEARKTK FT VEKALLKIAEVLESDDCPSGLLPLKIEPLVASLIEKKTDEIVTKPHCSDVSKPHINPLC FT RNAFKGKPCFITHGNWEVVANGANLEEVWGGVPSGWAQGNRNYFRWCGGSGWIQGCVLG FT TIGPQVVSTGIGSVGIRSGGMDGDGFVSLAWKDGDLTPNTWAALSKYNVVLFDSTCVFD FT ARSRLLPGLEKALTMDCKATVVIEDGVAGCGKTTSLLKQTKIETDLLLSANRETAKDAR FT ESGSIPDVMKYRVRTLDSYIMLKKWFTAERMLVDECFLVHSGIIYAAATLAQVKEIIAF FT GDTKQIPFVSRIPTFTLKHPSIKGVLKPKLVTYRCPRDATAVLSEKFYKKKVKTFNPIS FT SSLSLININSGMEIPAERDTLYIMHTQADKCAMLRHPGINANNVMTTHEAQGKTFDNVI FT LVRLSKTTNLLYSGKMPDAGPSHNLVALSRHRKTLRYYSVYADDPDDMVASGIRWSKTL FT DEQALSNYRVSG" XX SQ Sequence 3459 BP; 930 A; 700 C; 822 G; 1007 T; 0 other; gtattgcgaa tcattatttt gatcgcgacc cggattaatc agttttctga gtatataccc 60 gttagaactc aatggattct gtggttgaac acgcttctag tgttcttcgt ttggacgatc 120 ttttgaatga tgtcgtccgc cgcaacgccg ctaatgctgc cactgatgtt ggtagactta 180 ttagcgatgc cgccgtcaat gttgtcagac gtcaggtcga tttgaccccg gcgaagcccc 240 ttaacgtctc atttgcttta acacctgagg atcaaaatgc cttgagacgt gattttcctg 300 gtagggaatt gcaatttcgc aattccgcat cttcttcaca cgccgttatg cagctgcgca 360 ccgtgttatg ccgagacaga actatattta tagttaggtt ttccaaaccc gagactacga 420 ccattattga tattggtggt aatttctgta ctcatgccaa gatgggaagg gaaaatgttc 480 attcttgttg ccccattctt gatgtccgcg atggagcgcg gtttactgac agatttatgt 540 caattgccgg tgcgcttgaa aaacaaccag agcgagaact taggttgaat tattgtgatc 600 ataaatttga agattgcgat gtttccgctc catgggccat ggctatccat tccatatccg 660 acataccgat tacgacagtt gttaagcact gttttccaag gggtgtgaaa aaactgatag 720 catccgtcat gatggatccc atgatgttga tagccaccga gggattcata cctcgtttga 780 atgttcactg ggaaattgaa accattgaca aggagaggat aatctctttc cattttattg 840 atgctcccgg actttcatat acacataact atgacgtctt gatgcagtac atgacgtgta 900 atcaagttat tgtggccggg aaagccgcgt atcgtgtaga acgcgttgcc gatcttagtg 960 gagtatttat tgttgaaatc actctggctt ccactaataa agatcgattg gatttaattc 1020 ccatgcgtga tgtttcatgc gcgtggatgt catcgttgag aaggaaaaca ctggtgagaa 1080 tcgccattcc tcaactgaaa aattcctggg aaataaagca tgtcattatg gacaccgatt 1140 ttgttagacg tgttgccgaa gtttcattcc ggcagtacaa aagtgagacg cccattgaga 1200 acttagttca aagtgtggcg acgatgattt catcggcgtc caatcactgt gtcatcaatg 1260 gagtgacaat gcagaccggt tctccagttc ccattgatca ttatgttcca cttgctgtta 1320 cctttgttgc atacgctaga agcagatacc gtatggttaa accagccatg gagatggtgc 1380 gacaaagagg tgtgtccatt attgacccag atgctaacgt ggactatgtc cacgataagg 1440 gtgaagttat tgccaccgga aatgcggtaa aaactgccat caagggactc ctgtttccta 1500 caaggactaa gatgaacgat aattctacgc tcatctattc atgccccatc ttagagtcag 1560 ttgttgatga aataaaaact gttttaggtt gggatgtttg gagcactgat gatgccgtaa 1620 tttcatcgtt accttccttc tataaaatgg aagatgtttt cgaggtcact tccgagcatt 1680 actgcttatc tcacacgtta aatgtggatt attggctcga aggactttat gattcatacg 1740 atgaattgcg aaaggtccac aaaaagaaat tgatggaaga agaggcaagg aagaccaaag 1800 ttgaaaaggc cttgcttaaa attgctgagg ttttggaatc cgatgattgt ccttcaggat 1860 tattacctct taagattgag ccgctcgtag ctagtcttat agagaagaaa acggacgaaa 1920 ttgtgaccaa gcctcattgc tctgatgtgt cgaagcccca tatcaatccc ttatgccgga 1980 acgcattcaa ggggaagcca tgttttatta cccacgggaa ttgggaggtg gtagctaacg 2040 gcgcaaacct ggaggaggtg tggggtggag taccttcggg gtgggcgcaa ggaaatcgga 2100 attatttccg ctggtgtggg ggcagcggat ggattcaagg atgtgtgttg ggaaccattg 2160 gcccgcaagt ggtttcaacc ggaatcggat ccgtaggaat acggagcgga ggtatggacg 2220 gtgacggatt cgtttctttg gcctggaagg atggtgacct cacgccaaat acctgggcag 2280 ctctttccaa atacaacgtg gttttattcg attctacatg tgtatttgat gccagatcac 2340 gtttgttgcc tggacttgaa aaagccctaa cgatggattg taaagcaaca gtggtcattg 2400 aagacggggt tgctggttgc ggcaagacta cctcactttt gaaacagaca aaaattgaaa 2460 ccgacctatt attgtctgcc aatcgtgaga ctgcgaaaga tgctcgagag agtggatcta 2520 ttccagatgt tatgaagtat cgagtgcgta ccctcgattc atacatcatg ttgaagaaat 2580 ggttcacggc cgagagaatg ctcgttgatg agtgttttct cgtgcattca ggtattatat 2640 acgccgctgc cacgttagca caagtgaagg aaataattgc ttttggtgat actaagcaaa 2700 ttccatttgt gtcccgtatt ccgacattta ccttaaagca tccatcgatt aagggagtgt 2760 tgaagcctaa acttgttaca taccgatgtc ctagggatgc cacagcggtt ctgagtgaga 2820 agttttataa gaagaaggtt aaaaccttta atccaatttc ctcctcatta tcgctgatta 2880 atattaattc cggtatggaa attccagctg aaagggatac gctttacatt atgcacacac 2940 aagccgataa atgtgctatg ttgcgtcatc caggtatcaa tgctaacaat gtcatgacga 3000 cccatgaagc acaagggaaa acgtttgaca atgttatttt ggtacgtctc agtaagacaa 3060 ccaatttatt gtattccggg aaaatgcccg atgctggtcc ttctcataat ttggttgctc 3120 tttcgagaca tagaaaaaca ctacgatatt acagtgttta tgctgatgat ccagatgata 3180 tggtcgcatc tggaattcgc tggtctaaaa ctttagacga gcaagcttta tctaactacc 3240 gtgttagtgg ttagatcaat gttttcgtgt aacatgcatg ttacctagtg aagggtcctc 3300 cgggatgtgc tcagcaccta gccttagcca agttcatatg cccacctttg cttgtctccg 3360 ggtggatgcc tcatggtgct atgaatgcct ataattgaaa tattatagat gcctaatttt 3420 cctctcttga ggaaaattag atgcctccaa gggagaagc 3459 //