ID   AF226157; SV 1; linear; mRNA; STD; VRL; 1075 BP.
XX
AC   AF226157;
XX
DT   05-SEP-2000 (Rel. 65, Created)
DT   29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE   Raspberry ringspot virus isolate Orr segment RNA2 polyprotein mRNA, partial
DE   cds.
XX
KW   .
XX
OS   Raspberry ringspot virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1075
RX   DOI; 10.1016/S0168-1702(00)00158-1.
RX   PUBMED; 10958983.
RA   Scott S.W., Zimmerman M.T., Jones A.T., Le Gall O.;
RT   "Differences between the coat protein amino acid sequences of English and
RT   Scottish serotypes of Raspberry ringspot virus exposed on the surface of
RT   virus particles";
RL   Virus Res. 68(2):119-126(2000).
XX
RN   [2]
RP   1-1075
RA   Scott S.W., Zimmerman M.T., Jones A.T., Le Gall O.;
RT   ;
RL   Submitted (19-JAN-2000) to the INSDC.
RL   Plant Pathology and Physiology, Clemson University, P.O. Box 340377,
RL   Clemson, SC 29634-0377, USA
XX
DR   MD5; c67e958a908386e7d27d6f071a0b5696.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1075
FT                   /organism="Raspberry ringspot virus"
FT                   /segment="RNA2"
FT                   /isolate="Orr"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:12809"
FT   CDS             <1..>1075
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /note="putative movement/helper protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q9E7K9"
FT                   /protein_id="AAG10243.1"
FT                   /translation="QDSIQSMGDFWKEFYAKDSGKKIPDSHKSRLANDPNKVGFTKSAL
FT                   FHKQPLSHSLAQTWANFRGTQDKADLVKVTMDMNIEKYTVRLPDAVRTTAGPLYIEWIN
FT                   LPRMSENSARKLAEVGWNNADICGVDLAVKSHIAVGTPVRVIISLVDGACSDMPTATMC
FT                   AFEVNLASQNNRSLNLPLLSLPFSRLLADLHDFQNRVKIACQFRDPEGFNVGTPMLSFS
FT                   SLEFSELKQTAFERNSLLRDSWSEIEKRACHGGGRCVASQGIVQTWEKEVNPPLKEYAP
FT                   LVLPPVPQPKRNFIDQQTGEVVQSFMQKSRSMRFQSPSDLWSRPSVDGGSTSTQPPSKG
FT                   SLRCDNVPGCAYEVDPL"
XX
SQ   Sequence 1075 BP; 277 A; 231 C; 254 G; 313 T; 0 other;
     gtcaagattc catacagagt atgggtgatt tctggaaaga gttctatgcc aaggactcag        60
     gaaagaaaat acctgattct cataaatcga gactagccaa tgatcctaac aaagttggct       120
     tcactaagag tgcgttgttt cataaacagc ccctgtcgca ctctcttgct caaacttggg       180
     caaactttag gggtactcag gataaagcgg acttggtcaa ggtgaccatg gacatgaata       240
     ttgaaaaata tacagtccgc cttcctgatg ctgtgaggac tactgcaggt ccattataca       300
     tagagtggat aaacctgcca cggatgtctg aaaattccgc acgtaagctt gctgaagttg       360
     ggtggaataa tgctgatatt tgtggcgtgg accttgcagt taagtctcat atagcagtgg       420
     gtacacctgt gcgagttatt atttccctcg tagatggtgc ttgttcggat atgcccactg       480
     ctacaatgtg tgcttttgag gtgaacttag cttcgcagaa caatagatct ttaaatctac       540
     cactgctgag tttgcctttt tctaggcttt tggctgatct acatgacttc caaaatcgtg       600
     ttaagatcgc ttgtcaattt cgcgatcctg aaggatttaa cgtgggtaca cccatgttga       660
     gtttttcttc ccttgaattt tctgagctga agcaaactgc ttttgagcgt aattctttgc       720
     ttagggattc atggtctgaa attgagaagc gggcttgcca tggtggcggc cgttgtgttg       780
     cttcccaggg tattgtgcag acctgggaaa aggaggttaa tcctcccctc aaagaatatg       840
     caccgctggt tttaccaccc gtccctcaac caaaaagaaa ttttatcgac caacagacgg       900
     gagaggtggt tcaatctttt atgcaaaagt cccgctccat gcgatttcag tcaccatctg       960
     atttatggag caggccctct gtggatggag gttcaacatc tacacaaccg ccatcaaagg      1020
     gttctttacg gtgcgacaat gtacctggtt gtgcctatga ggtagatcca ctaca           1075
//