ID   AF224695; SV 1; linear; mRNA; STD; VRL; 1075 BP.
XX
AC   AF224695;
XX
DT   05-SEP-2000 (Rel. 65, Created)
DT   29-MAY-2003 (Rel. 75, Last updated, Version 2)
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DE   Raspberry ringspot virus isolate Himalaya E segment RNA2 polyprotein mRNA,
DE   partial cds.
XX
KW   .
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OS   Raspberry ringspot virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1075
RX   DOI; 10.1016/S0168-1702(00)00158-1.
RX   PUBMED; 10958983.
RA   Scott S.W., Zimmerman M.T., Jones A.T., Le Gall O.;
RT   "Differences between the coat protein amino acid sequences of English and
RT   Scottish serotypes of Raspberry ringspot virus exposed on the surface of
RT   virus particles";
RL   Virus Res. 68(2):119-126(2000).
XX
RN   [2]
RP   1-1075
RA   Scott S.W., Zimmerman M.T., Jones A.T., Le Gall O.;
RT   ;
RL   Submitted (14-JAN-2000) to the INSDC.
RL   Plant Pathology and Physiology, Clemson University, P.O. Box 340377,
RL   Clemson, SC 29634-0377, USA
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DR   MD5; 83ca727c2cc7497171f804cced99d7d7.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1075
FT                   /organism="Raspberry ringspot virus"
FT                   /segment="RNA2"
FT                   /isolate="Himalaya E"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:12809"
FT   CDS             <1..>1075
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /note="putative movement/helper protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q9E7L4"
FT                   /protein_id="AAG10240.1"
FT                   /translation="QDSIQSMGDFWKEFYAKDSGKKIPDSHKSRLANDPNKVGFTKSAL
FT                   FHKQPLSHSLAQTWANFRGTQDKADLVKVTMDMNVGKYTVRLPDAIRTTAGPLYIEWIN
FT                   LPRMSENSARKLAEAGWNNADICGVDLAVKSHVAVGTPVRVIISLVDGACADMPTATMC
FT                   AFEVNLASQNNRSLNLPLLSLPFSRLLADLHDFQNRVKIACQFRDPEGFNVGTPMLSFS
FT                   SLEFSELKQTAFERNSLLRDSWSEIEKRACHGGGRCVASQGIVQTWEKEVNPPLKEYAP
FT                   LVLPSVPQPKRNFIDQQTGEVVQPFMQKSRSMRFKSPSDLWSRPSVDGGQTSTQPPLKG
FT                   SLRCDNVPGCAYEVDPL"
XX
SQ   Sequence 1075 BP; 274 A; 247 C; 264 G; 290 T; 0 other;
     gtcaagattc catacagagt atgggtgatt tctggaaaga gttctatgcc aaggattcag        60
     gaaagaaaat acccgactcc cacaaatcgc ggttagccaa tgatccaaac aaagttggct       120
     tcactaagag tgcgttgttt cataaacagc ccctgtcgca ctctcttgct caaacttggg       180
     caaattttag gggaactcag gacaaggcgg acttggtcaa ggtgaccatg gacatgaatg       240
     ttggaaaata tacagtccgc cttcccgatg ccatacggac cactgcaggg ccactttaca       300
     ttgagtggat aaacttgcca cgaatgtctg agaattctgc acgcaaactg gctgaagccg       360
     gatggaataa tgcagatatt tgtggtgtgg accttgcagt caagtcccat gtagcggttg       420
     gcacacctgt gcgagttatc atctccctcg tggatggtgc ttgcgcggat atgcctaccg       480
     ccacaatgtg tgcctttgag gtaaacttag cttcgcagaa caatagatct ttgaatctac       540
     cactgctaag tttgcctttt tctaggctgt tggctgatct gcatgacttc caaaatcgtg       600
     tcaagatcgc ttgtcaattt cgtgatcctg aaggatttaa tgtgggtaca cccatgttga       660
     gtttttcttc ccttgagttt tccgagctaa agcaaactgc ttttgagcgt aattctctac       720
     ttagggactc atggtctgaa attgagaagc gggcttgcca tggtggcggc cgttgtgttg       780
     cttcccaggg tatagtgcag acctgggaaa aggaggttaa tcctcctctc aaagaatatg       840
     caccgctggt tttaccatct gtccctcaac caaaaagaaa ttttatcgat caacagacgg       900
     gagaggtggt tcaacccttt atgcaaaagt cccgctccat gcgattcaag tcgccatctg       960
     atttatggag caggccctct gtggatgggg gacaaacatc cacacaaccg ccattaaagg      1020
     gctctttgcg gtgtgacaat gtgcctgggt gtgcctatga ggtagatcca ctaca           1075
//