ID AF221834; SV 3; linear; genomic RNA; STD; VRL; 2157 BP. XX AC AF221834; XX DT 03-FEB-2000 (Rel. 62, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 5) XX DE Rice stripe virus isolate PJ major non-capsid protein and VCP4 protein DE genes, complete cds. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2157 RA Lin H., Wei T., Lin Q., Xie L.; RT "Sequences analysis of RNA4 of two high-virulent isolates of rice stripe RT tenuiviruses"; RL Unpublished. XX RN [2] RP 1-2157 RA Lin H., Wei T., Wu Z., Lin Q., Xie L.; RT "Isolate variability of rice stripe virus: implication of origin of RSV in RT China"; RL Unpublished. XX RN [3] RP 1-2157 RA Wei T., Lin H., Xie L.; RT "Molecular variability of RNA4 intergenic regions in rice stripe virus"; RL Unpublished. XX RN [4] RP 55-588 RA Lin H., Wei T., Wu Z., Lin Q., Xie L.; RT ; RL Submitted (06-JAN-2000) to the INSDC. RL Plant Protection, Institute of Plant Virology, Fujian Agricultural RL University, Fuzhou, Fujian 350002, P.R.China XX RN [5] RC Sequence update by submitter RP 1-2157 RA Lin H., Wei T., Wu Z., Lin Q., Xie L.; RT ; RL Submitted (16-MAR-2000) to the INSDC. RL Plant Protection, Institute of Plant Virology, Fujian Agricultural RL University, Fuzhou, Fujian 350002, P.R.China XX RN [6] RC Sequence update by submitter RP 1-2157 RA Wei T., Lin H., Xie L.; RT ; RL Submitted (14-MAY-2003) to the INSDC. RL Plant Protection, Institute of Plant Virology, Fujian Agricultural RL University, Fuzhou, Fujian 350002, P.R.China XX DR MD5; 75e96e0d1e3f1f853791329b13eac22e. XX CC On May 14, 2003 this sequence version replaced AF221834.2. XX FH Key Location/Qualifiers FH FT source 1..2157 FT /organism="Tenuivirus oryzaclavatae" FT /segment="4" FT /isolate="PJ" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052763" FT CDS 55..591 FT /codon_start=1 FT /product="major non-capsid protein" FT /note="NCP; disease specific protein" FT /db_xref="InterPro:IPR006960" FT /db_xref="UniProtKB/TrEMBL:Q9ICC6" FT /protein_id="AAF30292.1" FT /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER FT VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI FT GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKLLLDQIIKMAKAESSDTEEYEKVWKKM FT PTYFESIIQPLLHKT" FT CDS complement(1246..2106) FT /codon_start=1 FT /product="VCP4 protein" FT /note="32K protein; putative 30K movement protein FT superfamily member" FT /db_xref="GOA:Q9ICE2" FT /db_xref="InterPro:IPR004980" FT /db_xref="UniProtKB/TrEMBL:Q9ICE2" FT /protein_id="AAF43723.1" FT /translation="MALSRLLSTLKSKVLYDDLSEESQKRVDNKNRKSLALSRRPLNQG FT RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT FT HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNPSDQVEVEVRYPISKNFAVLGSL FT ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTNDTVMFEFEPL FT EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE FT VSVIM" XX SQ Sequence 2157 BP; 685 A; 445 C; 403 G; 624 T; 0 other; acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa 60 gacgtacaaa ggacaataga agtttctgtt ggtcctattg taggcctaga ttacactcta 120 ttgtatgaca ctctgcctga gactgttagc gataacatta ctctacctga tttgaaagat 180 ccagagagag tcacggaaga tactaagaag ctaatactca aaggctgtgt ttacatagca 240 tatcatcacc ccttggagac tgacaccctt ttcatcaaag ttcacaaaca tataccagag 300 ttttgtcact cattcctatc acacctttta gggggtgaag atgatgataa tgctcttata 360 gacattggtc tgtttttcaa tatgttgcaa ccctctttgg gcggttggat aaccaagaat 420 tttcttagac accctaatag gatgtctaag gaccaaatta aactgctcct ggatcagatt 480 attaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag 540 atgccaactt attttgaatc aattatccaa cctcttctac acaagacata gtttattgca 600 tatcacactt tccacccacg agtgcttgca ttctagaagt ggagccagtt tgggttgacc 660 ttcttgtgtg aaaatacgag tatattctat agtctgaaca atatacttga tgtttgtcca 720 cttaaacttg acagtttgta aataattgtg tgtgattgtg tgtgtgtgca tatatgttaa 780 tatataactg tgcacaggtg tgtagatata aacacttgaa acgaataaat taatatattc 840 ctatcaactc atatacatac ttgtgagtct tagctcctca ctatacaaac atagaaacat 900 gagagtatca tacaagaccc attgcaaata ctaataactt tgttttcaca atgtcaaaac 960 taaaacctga aataccaaaa acatgagaaa atatgaaatc aaaaacaatg aatggtgcta 1020 agcaccacat ccggatgtgg tgcgtagcac cattttcata acattaatct ataacctact 1080 agtagcaaaa acacccaaat gcatgaagtg catagcactc ttttatggat tgactaccat 1140 aattacgtga atgcatagca ttctcctgaa aaaaagcaga gcagaacaga ccacatcaag 1200 tgcgtagtac tggatgttag catactcagg aactggtatt ctcacctaca tgatgacaga 1260 aacttcagat tttgatttct ttgtgatagg tatcttcttt ggttgcttca ccacaccgaa 1320 ctccttctca gtgtctagct cagggaaact cttgctggtg aaagcacctc caacagcttt 1380 ctgaacaaca ttagtcgtaa aattactgaa gctggacaaa tggtttatgg ccttatcttc 1440 tagtggttca aactcaaaca tcacagtgtc attggtcttc atggacactg gcagatcagt 1500 cctctcaatc ccccagaacc aaagagttct agagatgaca cagttctgca ctgagctgtc 1560 atcaacagat actgacactt gaagattatg cttatcctcc aaagccagaa aattcgctag 1620 ggaacccaag acagcaaaat tcttgctaat cgggtagcga acctccacct caacttgatc 1680 tgaggggttc acataggact tgtctattat gcggagggtt gttattccac tagctctacc 1740 cttaattcca atccagacca tagcaaaagt tgccactcta aagaatgggt aatgggtgag 1800 aggttgatga aaccaatatg gatcaacaag tatgttgaaa gttgctttcc tatgggcctt 1860 cacagaatag tcctgtttgg ctatgaacat atcatacttg ttcaccttga catctgagaa 1920 gctgaagggt tccaatccaa gcattgtggc agcttggtca atcgtaaccc taccctggtt 1980 cagaggcctt ctggagagag ctagagattt cctattctta ttatcaactc tcttttggga 2040 ctcctcacta aggtcatcat agagtacctt actttttaaa gtggacaaaa gtcgagacaa 2100 agccataatt aaagtatata ttagcttaat ctcaaaagat atgccctgac tttgtgt 2157 //