ID AF208497; SV 1; linear; genomic RNA; STD; VRL; 4829 BP. XX AC AF208497; XX DT 06-JUL-2000 (Rel. 64, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Tomato spotted wilt virus isolate D M segment G1/G2 glycoprotein precursor DE and non-structural protein genes, complete cds. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4829 RX DOI; 10.1094/MPMI.2001.14.2.242. RX PUBMED; 11204788. RA Hoffmann K., Qiu W.P., Moyer J.W.; RT "Overcoming host- and pathogen-mediated resistance in tomato and tobacco RT maps to the M RNA of Tomato spotted wilt virus"; RL Mol. Plant Microbe Interact. 14(2):242-249(2001). XX RN [2] RP 1-4829 RA Hoffmann K.A., Qiu W.P., Moyer J.W.; RT ; RL Submitted (26-NOV-1999) to the INSDC. RL Plant Pathology, North Carolina State University, 2610 Gardner Hall, RL Raleigh, NC 27695-7616, USA XX DR MD5; 30c6a98e1de3fdfed56bfdf0404ef955. XX FH Key Location/Qualifiers FH FT source 1..4829 FT /organism="Orthotospovirus tomatomaculae" FT /chromosome="M" FT /isolate="D" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052585" FT CDS 101..1009 FT /codon_start=1 FT /product="non-structural protein" FT /note="NSm" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:Q9IKB8" FT /protein_id="AAF80978.1" FT /translation="MLTLFGNKRPSKSAGKDEGPLVSLAKHNGNVEVSKQWSSSDEKLA FT LTKAMDASKGKILLNTKGTSSFGTYESDSITESEGYDLSARMIVDTNHHISNWKNDLFV FT GNGKQNANKVIKICPTWDSRKQYMMISRIVIWVCPTIPNPTGKLVVALVDPNMPSEKQV FT ILKGQGTITDPICFVFYLNWSIPKMNNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCMVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1338..4745) FT /codon_start=1 FT /product="G1/G2 glycoprotein precursor" FT /db_xref="GOA:Q9IKB7" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/Swiss-Prot:Q9IKB7" FT /protein_id="AAF80979.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLTFRATDAKVEIIRGDHP FT EIYDDSAENEVPTAASIQREAILETLTNLVLESRTPGTRQIREEKLTIPISTEPATQKT FT ISVLDLPNNCLNASSLKCEIKGISTYNVYYQVENNGVIYSSVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPITKLDNKRHFSVGTNFFIPESLTQDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENVEHKVIAFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN FT KTTKPLFLWYDLMGLITYPVLLLINCLWKYFPFKCSNCGNLCIVTRECTKVCICNKSKA FT SKEHSSECPILSKEADHDYNKHKWTSMEWFHLIVNTKLSLSLLKFVTEILIGLVILSQI FT PMSMAQTTQCLSGCFYVPGCPFLVTSKFEKCPEKDQCYCNVKEDKIIESIFGTNIVIEG FT PNDCIENQNCIARPSIDNLIKCRLGCEYLDLFQNKPLYNGFSDYTESSLGLTSVGLYEA FT KRLRNGIIDSYNRTDKISGMIAGDSLDKNETSIPENILPRQSLIFDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYIKSVGIHHEVSEEYTTAPIQSTHTDFYPTCIGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDIDKSYRIYSVL FT KSTIVADVCISGILGGQCSRITEEVPYENTLFQADIQSDLHNDGITIGELIAHGPDSHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAATGKKSVTIKTCGYDT FT YRFRSGLEQISDIPVSFKDFSSFFLEKSFSLGELKIVVDLPSDLFKVVPKKPSITSTSL FT NCNGCLLCGQGLSCILEFFSDLTFSTAISIDACSLSTYQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDIPVEVLVNNVIIEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVVLLIAFIFLVIYFCSILTSICKGYVKHKSYKSRSKIEDD FT DEPEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4829 BP; 1545 A; 867 C; 852 G; 1565 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaacta 60 cattacacaa gctcctctac cttgggctgt tgaactcaaa atgttgactc ttttcggtaa 120 caagaggcct tctaagtctg ccggaaagga tgaaggtcct ttagtttcac ttgctaaaca 180 taatggcaat gttgaagtct caaaacaatg gtcttcttct gatgaaaagc ttgctttaac 240 caaagccatg gatgcatcca aaggaaagat actgttgaac actaagggaa catcttcctt 300 tggaacctat gaatctgatt ctatcacaga atcagagggt tatgatcttt ctgctagaat 360 gatagtagat acaaaccatc atatctcaaa ctggaaaaat gatctttttg ttggcaacgg 420 aaagcaaaat gctaataagg ttatcaagat ctgtccaact tgggacagca gaaaacaata 480 catgatgatt tccaggattg tgatatgggt ctgccccact ataccaaacc ctacagggaa 540 acttgtggtt gctttagttg atcccaacat gccatctgaa aagcaagtca tcctgaaggg 600 tcaagggaca ataactgatc ctatctgctt tgttttttat ctgaactggt ctattccaaa 660 gatgaacaac accccagaaa actgttgtca gctgcatttg atgtgcagcc aagaatacaa 720 gaaaggggtt tcttttggta gtgtcatgta ttcttggaca aaagagtttt gtgattcacc 780 cagagctgat aaagacaaaa gttgtatggt tatacctcta aacagggcca ttagagctag 840 gtctcaagca ttcattgaag cctgcaagct gataattcct aaaggaaaca gtgagaagca 900 gattaaaaaa cagcttaaag aattgagctc aaatcttgag agatcagttg aagaagaaga 960 ggaagggatt tctgacagtg ttgctcagtt atcctttgat gaaatatagt ttttttaaaa 1020 acacttattt aagcttaaat ttctgtctat tttgcatttc gaatccaaaa aaccgaaaca 1080 aaaaacaaaa aacaaaaaaa gaaaaaacaa acaaaaaaaa tcaaaccaaa aaacaaaaac 1140 aaaataaggc tgaaaagcca aactttggtc cgaagactct ttttgttgtt ttttgtttat 1200 ttgtattttt tgtttgttgt ttttgtttat ttcatatttg ctttttatta gtcaatgatt 1260 gattctaaag atttttatat atataaaatc ctgttaatat agaagattga atcaaattta 1320 atctgtgaca agcatcctca gacaaggtga gagaaatcca taggtggcct tcgtcttgtc 1380 attgtatctt tcattaacat aggggctttg atctcaggtt catcatcatc ctctatcttg 1440 gatctagatt tataagattt atgctttaca tatcctttac aaatggatgt cagaatagaa 1500 cagaaataaa tcacaaggaa aatgaatgca ataagcagta ccactctgat agtatcaaaa 1560 aatgagccaa agtaacttgc aatgaaattg aatggacttt taatataatc ccagaagccc 1620 catgcagaag aatcagaatt atattgttgt tcttcatgag catactcatc attctgatct 1680 attatattct ctggttcttc tataataaca ttattaacca aaacttccac aggtatatct 1740 ggattgcctt ctggatacag tgtcatcttc ttcttgtccg ggttggctga acaaaacatt 1800 gttatattgt atttattaga tcctttttta acagccagct gataagtaga taaagagcaa 1860 gcgtctatag aaattgcagt agaaaatgtc aaatctgaga aaaattctaa aatgcaagat 1920 aaaccttggc cgcatagaag acagccgttg caatttaagc ttgttgaagt tatagaaggt 1980 tttttaggaa caactttaaa aagatcagat ggaagatcaa ctacgatttt cagttcccct 2040 aaactaaaag atttttccag gaaaaaacta gagaaatctt tgaaactaac aggaatatct 2100 gatatttgct ctaaaccaga tctaaacctg tatgtgtcat atccacatgt tttaatagtg 2160 actgattttt tccctgttgc tgcacaatcc caagacatgt catctccttc tagagttttc 2220 ttagtaaaaa taggcactcc atcatgggtc aattgcggat gaccaaacat tttcacagga 2280 tcattcaagt ttgcaatatt tccagagtaa atatggctgt caggtccatg agctattagt 2340 tcacctatag tgataccatc attatgcaaa tctgactgta tatcagcttg aaacaatgta 2400 ttttcataag gaacttcttc agtaatcctt gagcattgtc ctcccaaaat accagaaata 2460 caaacatctg ctactatagt tgatttgagc actgaataaa ttctatatga tttgtcgata 2520 tcataaatat ttcgacagaa tccgcatgta gcaccctcat taattgcaaa acaccaagct 2580 tcttcacatc cccagtaaga agttggtgtt atacaaaaat cttggaaacc tgttaaagct 2640 tgatttttcc tgcaagtgtc gcagtttcct atacaagtgg gataaaaatc cgtatgggtg 2700 ctttggatgg gagctgttgt atattcttct gacacttcat gatgaattcc cacacttttg 2760 atataaatca caaatttttt ggctgtttct gaggtcttgt catttagcat gaatatagtt 2820 cctcctcctc ccaaaagaga ttgttctatc atatatctat atttcccgtc tacaacagaa 2880 tcaaagatta atgattgcct gggcaggatg ttctctggta tgcttgtttc atttttgtct 2940 aaagagtctc ctgcaatcat tccagaaatt ttgtctgtac gattatagga atctattata 3000 ccatttctca atctcttagc ctcatacaga ccaactgatg ttaaccctaa agagctttct 3060 gtataatctg aaaacccatt gtacaaaggt ttgttctgaa ataaatctag gtattcgcaa 3120 cctaatctgc attttataag attatcaata gatgggcgtg caatgcaatt ctggttctct 3180 atgcaatcat taggaccttc tataacaata ttagtgccaa agatactttc tatgatcttg 3240 tcttctttta cattgcagta acattgatct ttttcagggc atttttcaaa tttgcttgta 3300 accaaaaatg gacagcctgg aacataaaag catccactca aacattgggt tgtttgagcc 3360 atagacatgg gaatctgaga caaaatgact aaacctatca aaatttcggt cacaaatttt 3420 agcaaactca agctcagctt agtgttcact attagatgga accattccat gctagtccac 3480 ttatgtttgt tgtagtcatg atctgcctct ttggacaata tgggacactc tgaagaatgc 3540 tcttttgaag ctttgctttt gttgcaaatg cagactttag tacactcacg tgtgactatg 3600 cacaaattgc cgcagttaga acatttaaat gggaaatatt tccataagca atttatgagc 3660 aataagacag ggtatgtgat caagcccata agatcatacc agagaaagag aggtttagtc 3720 gtcttgttca ctaaccatcg gatagggaaa tagatcaaca aagctatcaa tatcaatctt 3780 atccaagaaa aattgatgca ggctgtttgc ttgtaaatac tttttgaata tttgattatg 3840 caatctctga ctcttttgtt tgtttttggt attttagctg atttgtcacc gcacaagaga 3900 ttgtgttcac catccaacat ttcctcggta aaagtgatac ttgctgatcc agaaaaagct 3960 ataaccttgt gttccacatt ttcaccaggt ttttttatca aataacccat gatcttctca 4020 gggctagtga tgctcacagt atagggattt gcaaagtttg atttagttat tttgcagtca 4080 ccagataact ttacagtttg taatgatact gttccattag tggggtatga gttgtaagtt 4140 ataggataat tatcttgtgt caggctctct ggaatgaaga aatttgttcc tactgaaaaa 4200 tgtcttttgt tgtcaagttt ggtaatagga ataactggga ctttggagaa tctctttggc 4260 aaatttaaag aattatcaca tttttctaaa ccttctgctg aatcagaaac actggaatat 4320 atgacaccat tgttttcaac ttgataataa acattataag tagatatccc ttttatctca 4380 catttcaatg aggaagcatt caagcagttg ttgggaagat ccaaaacaga gattgttttt 4440 tgcgttgctg gctcagtgga aatagggatg gttaattttt cttctcgtat ctgacgggtt 4500 ccaggagtcc gagattctag caccagatta gttaaagtct ccaagatagc ttcgcgttga 4560 atcgatgcag cagtgggtac ctcattctca gcagaatcat cataaatctc aggatgatct 4620 ccacgaatta tttctacttt agcatctgtg gctctgaagg tcaagaatgc caacaaaaca 4680 gaactcaggg caattgtgaa aagactcact tttaccacta gttctagtag ttttagaatt 4740 ctcatcttag atgtctaccc agattacaat ggttgtgtga ttaatttcaa gatgtctgga 4800 ttaaggtttt tgtttgcact gattgctct 4829 //