Dbfetch

Dbfetch

ID   AF206724; SV 1; linear; genomic RNA; STD; VRL; 573 BP.
XX
AC   AF206724;
XX
DT   02-JUN-2000 (Rel. 63, Created)
DT   17-SEP-2001 (Rel. 69, Last updated, Version 2)
XX
DE   Human rotavirus B strain CAL-1 segment 11 putative nonstructural protein
DE   NSP5 gene, complete cds.
XX
KW   .
XX
OS   Human rotavirus B strain CAL-1
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus.
XX
RN   [1]
RP   1-573
RX   DOI; 10.1016/S0140-6736(00)03596-0.
RX   PUBMED; 11213100.
RA   Sen A., Kobayashi N., Das S., Krishnan T., Bhattacharya S.K., Naik T.N.;
RT   "The evolution of human group B rotaviruses";
RL   Lancet 357(9251):198-199(2001).
XX
RN   [2]
RP   1-573
RA   Sen A., Das S., Krishnan T., Kobayashi N., Naik T.N.;
RT   "Partial sequence of cDNA of the gene segment 11 (NSP5) of the human group
RT   B rotavirus strain CAL-1";
RL   Unpublished.
XX
RN   [3]
RP   1-573
RA   Sen A., Das S., Krishnan T., Kobayashi N., Naik T.N.;
RT   ;
RL   Submitted (19-NOV-1999) to the INSDC.
RL   Division of Virology, National Institute of Cholera and Enteric Diseases,
RL   C.I.T. Road, Scheme XM, Beliaghata, Calcutta, West Bengal 700 010, India
XX
DR   MD5; 3b737d19274f0da7ac5a21dcde0f4e2f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..573
FT                   /organism="Human rotavirus B strain CAL-1"
FT                   /chromosome="11"
FT                   /strain="CAL-1"
FT                   /mol_type="genomic RNA"
FT                   /note="isolated from stool samples of adult patient
FT                   suffering from diarrhea"
FT                   /db_xref="taxon:121794"
FT   CDS             15..527
FT                   /codon_start=1
FT                   /product="putative nonstructural protein NSP5"
FT                   /note="NS26"
FT                   /db_xref="GOA:Q9J3M1"
FT                   /db_xref="InterPro:IPR002512"
FT                   /db_xref="UniProtKB/TrEMBL:Q9J3M1"
FT                   /protein_id="AAF72869.1"
FT                   /translation="MAEASEFNFTTKRKQRIMSDRRSKDDTKQKKIEEKSDVDLVDSAS
FT                   VYSQESARSNYSDAYDKLKREPIVEESNDAKYRNFEFSEDEEVYRPSSKASDKSYREMK
FT                   RKYDGTSTSDSILEKLSELNLEIEKIKQMNQPVTIDAAFNMILRNVDNLTIRQKQALVN
FT                   AIINSMN"
XX
SQ   Sequence 573 BP; 225 A; 96 C; 109 G; 143 T; 0 other;
     ctcactaccc agagatggca gaagcgtctg agttcaactt taccacaaaa agaaagcaga        60
     gaataatgag tgatcgaaga tcaaaagatg acacaaaaca aaaaaagatt gaagaaaaat       120
     ctgatgttga cttggttgat tcagcctcag tttattcaca agaatctgcc agaagtaact       180
     atagtgatgc ttacgataag ttaaaacgtg aaccaatagt tgaagaatca aatgacgcga       240
     agtataggaa ttttgaattt tctgaagatg aagaagttta tagaccatca agtaaagcgt       300
     cagacaaatc atatagagaa atgaaacgta aatatgatgg tactagcacg tcagattcca       360
     ttttagaaaa attgtcagag ttaaatctcg agattgagaa gataaaacaa atgaaccaac       420
     cagtcacaat cgatgcagca ttcaacatga ttcttcgaaa cgttgacaat ctaactataa       480
     ggcagaaaca ggcattagta aacgcaatta ttaattctat gaactagact gtgatctcca       540
     cctgtcgtct actggggtca acctcttgag tta                                    573
//