ID   AF205850; SV 1; linear; genomic RNA; STD; VRL; 979 BP.
XX
AC   AF205850;
XX
DT   02-JUN-2000 (Rel. 63, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 5)
XX
DE   Human rotavirus B strain CAL-1 segment 8 putative nonstructural protein
DE   NSP2 gene, complete cds.
XX
KW   .
XX
OS   Human rotavirus B strain CAL-1
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus.
XX
RN   [1]
RP   1-979
RX   DOI; 10.1016/S0140-6736(00)03596-0.
RX   PUBMED; 11213100.
RA   Sen A., Kobayashi N., Das S., Krishnan T., Bhattacharya S.K., Naik T.N.;
RT   "The evolution of human group B rotaviruses";
RL   Lancet 357(9251):198-199(2001).
XX
RN   [2]
RP   1-979
RA   Sen A., Das S., Krishnan T., Naik T.N.;
RT   "Partial sequence of gene segment 8 of the human group B rotavirus strain
RT   CAL-1 encoding an extended protein in comparision to the cognate gene
RT   product of the ADRV strain";
RL   Unpublished.
XX
RN   [3]
RP   1-979
RA   Sen A., Das S., Krishnan T., Naik T.N.;
RT   ;
RL   Submitted (17-NOV-1999) to the INSDC.
RL   Division of Virology, National Institute of Cholera and Enteric Diseases,
RL   C.I.T. Road, Scheme XM, Beliaghata, Calcutta, West Bengal 700 010, India
XX
DR   MD5; f609d72fd40852af9d1d3a125d7aa23b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..979
FT                   /organism="Human rotavirus B strain CAL-1"
FT                   /segment="8"
FT                   /strain="CAL-1"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Calcutta"
FT                   /note="isolated in 1998 from the stools of an adult patient
FT                   suffering from diarrhea"
FT                   /db_xref="taxon:121794"
FT   CDS             36..941
FT                   /codon_start=1
FT                   /product="putative nonstructural protein NSP2"
FT                   /db_xref="GOA:Q9J3T3"
FT                   /db_xref="InterPro:IPR003668"
FT                   /db_xref="UniProtKB/TrEMBL:Q9J3T3"
FT                   /protein_id="AAF72868.1"
FT                   /translation="MTQSVSLSDFIVKTEDGYMPSDRECVALDRYLSKEQKELRETFKD
FT                   GKNDRSALRIKMFLSPSPSRRFTQHGVVPMREIKTNTDIPSTLWTLVTDWLLNLLQDEE
FT                   NQEMFEDFISSKFPDVLASADKLARFAQRLEDRKDVLHKNFSKAMNAFGACFWAIKPTF
FT                   ATEGKCNVVRATDDSMILEFQPVPEYFRCGRSKATFYKLYPLSDEQPVNGMLALKAVAG
FT                   NQFFMYHGHGHIRTVPYHELADAIKSYARKDKETLESISKSPLAAQCGSKFLDMLDGIR
FT                   SKQKIEDVILKAKIFEKKRS"
FT   variation       761
FT                   /replace=""
FT                   /note="encodes a longer protein than that encoded by the
FT                   ADRV virus strain"
XX
SQ   Sequence 979 BP; 325 A; 175 C; 199 G; 280 T; 0 other;
     gtgtgtcgtg agagggctcc atcaccctgg tcaccatgac gcaatcagtt tctctttctg        60
     atttcatcgt taagactgaa gatggatata tgccatcaga cagagaatgt gttgcattgg       120
     atagatattt atccaaagag cagaaggaac taagagaaac ttttaaggat ggaaaaaatg       180
     atagatcagc tttaagaatt aaaatgttct tatctccttc accttccaga cgattcactc       240
     aacatggagt tgttccaatg agagaaataa aaacaaatac ggatatacca agtacactat       300
     ggactcttgt gactgattgg ttactaaatt tacttcaaga tgaagaaaat caggaaatgt       360
     ttgaagattt tattagttcc aaatttccgg atgttttagc ttcggcagac aagctagccc       420
     gtttcgccca gcgattggag gatagaaaag atgtgttgca caagaatttt tctaaagcca       480
     tgaatgcctt tggcgcctgt ttttgggcga tcaaaccgac ttttgccact gagggaaaat       540
     gtaatgttgt aagagccact gatgattcaa tgatactaga gtttcagcca gtaccagaat       600
     attttcgttg tggaagatca aaagctacat tttataaatt atacccactc tcagacgaac       660
     aacccgtcaa tggcatgctc gctctaaaag cagttgctgg aaatcagttt tttatgtacc       720
     atggacatgg gcacatcaga acagttccat atcatgaact tgctgatgcc atcaaatcat       780
     acgctcgtaa agataaagaa acgctcgaga gcatttctaa atcaccactt gcagctcaat       840
     gtggtagtaa atttctcgat atgctcgatg gaattagatc aaaacaaaaa attgaagatg       900
     tgattttgaa agcaaaaatt tttgaaaaga aaagaagctg aacgtgttaa atccgctgaa       960
     atgggttaac ggctatttt                                                    979
//