ID   AF203530; SV 1; linear; genomic RNA; STD; VRL; 1606 BP.
XX
AC   AF203530;
XX
DT   06-JUL-2000 (Rel. 64, Created)
DT   30-NOV-2002 (Rel. 73, Last updated, Version 3)
XX
DE   Carrot thin leaf virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Carrot thin leaf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1606
RX   DOI; 10.1007/s00705-002-0865-8.
RX   PUBMED; 12376749.
RA   Moran J., van Rijswijk B., Traicevski V., Kitajima E.W., Mackenzie A.M.,
RA   Gibbs A.J.;
RT   "Potyviruses, novel and known, in cultivated and wild species of the family
RT   Apiaceae in Australia";
RL   Arch. Virol. 147(10):1855-1867(2002).
XX
RN   [2]
RP   1-1606
RA   Mackenzie A., Gibbs A.;
RT   ;
RL   Submitted (12-NOV-1999) to the INSDC.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra 2601, Australia
XX
DR   MD5; efc4769c4457cbdd98bda776b4f0bbde.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1606
FT                   /organism="Carrot thin leaf virus"
FT                   /mol_type="genomic RNA"
FT                   /note="CTLV"
FT                   /db_xref="taxon:114922"
FT   CDS             <1..1449
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains partial NIb polymerase and complete coat
FT                   protein sequence"
FT                   /db_xref="GOA:Q9ILZ2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q9ILZ2"
FT                   /protein_id="AAF80962.1"
FT                   /translation="GNNSGQPSTVVDNTLMVIIALYYSLHELGYERSQFDQVCKFFVNG
FT                   DDLIIAVNPSEVQMLDELQSLFKQLGLNYDFSSRSNDIKELWFMSHQGMEREGKLIPKL
FT                   EIERIVSILEWDRSTEPEHRLEAICASMVEAWGYDWLVHEIRKFYSWVLEQFPYNELAT
FT                   QGKAPYIAETALRKLYLDVDATTEELEAYGDIFQWEDEGEETVYHQEDKDADKVMDAGI
FT                   GVPPKDKGKNTETDANKQLSASKDKDVNVGTSGTFAIPKLKGMASKMRLPKVRGKTVLN
FT                   LEHLIQYNPEQTDLSNTRSTHNQFNNWYDGVKKDYQLDDAQMEIILNGLMVWCIENGCS
FT                   PNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSDAAEAYIEKRNAEKAYMPRY
FT                   GLQRNLNDPSLARYAFDFYEMTAKTPNRAREAHLQMKAAALRNASNKLFGIDGKVSSQE
FT                   EDTERHTTDDVNRNMHSMLGVRTM"
FT   3'UTR           1450..1606
XX
SQ   Sequence 1606 BP; 553 A; 283 C; 375 G; 395 T; 0 other;
     gggaacaaca gtgggcagcc atcaacagtt gtggacaaca cactcatggt aattatagct        60
     ttatattact cacttcatga gttaggatat gagagatccc aattcgacca agtttgcaaa       120
     ttcttcgtaa atggtgatga cttaatcata gcagtgaatc caagcgaagt tcagatgcta       180
     gatgagttac aatctttgtt caagcagttg ggtctgaact atgacttttc atcgcgctca       240
     aatgacataa aagagctatg gtttatgtca caccaaggaa tggaacggga gggtaaactc       300
     atacccaagt tggagataga aagaatcgtg tcaattcttg aatgggacag atctacggaa       360
     ccggagcata gactagaagc aatttgcgca tcaatggttg aagcatgggg atatgactgg       420
     ttggttcacg agatcaggaa gttctatagt tgggttttag aacaattccc atacaatgag       480
     ttggccacac aaggaaaagc accatacata gctgagactg ccttgaggaa attgtactta       540
     gatgttgatg ctacaacaga agagctagaa gcgtatggag acatatttca atgggaagat       600
     gaaggtgaag agacagttta tcaccaagaa gataaagatg ctgacaaagt aatggacgct       660
     ggaattggtg ttccaccaaa agataaggga aagaacactg agactgatgc aaacaagcaa       720
     ctttcagcaa gcaaagataa agatgtgaat gttggaacta gcggaacctt cgcaattccc       780
     aagcttaaag gaatggcatc aaaaatgaga ttaccaaagg ttagagggaa aacagttcta       840
     aacttagaac atttgataca gtacaatcca gagcaaactg acttgtcaaa tacaagatca       900
     acccataacc aatttaacaa ttggtatgat ggtgttaaga aggactacca acttgatgat       960
     gctcaaatgg aaatcatatt gaatggtctc atggtatggt gcatagagaa tggttgttct      1020
     ccaaacataa atggaatgtg ggtgatgatg gatggtgagg agcagataga gtacccaata      1080
     aaaccattaa ttgatcacgc caaacctaca tttcgccaaa taatggccca tttcagtgac      1140
     gccgctgaag cgtacattga aaagagaaat gctgaaaaag catacatgcc cagatatggg      1200
     cttcagcgca acttaaacga tccgagtctt gcacgttatg cattcgactt ctacgagatg      1260
     actgcaaaga caccaaatag agccagagaa gcccacctgc agatgaaggc ggcggctcta      1320
     agaaatgcta gtaataagtt atttggcata gatggaaagg tgagttcaca ggaagaggac      1380
     acggaaaggc acaccactga tgatgtgaat cggaacatgc atagcatgct tggcgtgcgt      1440
     actatgtaat gggtttgtct tgatattcga tataagaatt tccgtagtat cctctctgtt      1500
     ttattatagc atcgtataat atcgagcttg tcttcctgac ctggcgtagt gtttgcttca      1560
     aacgtgtcag tgcctgactt caagtaagag aaaaaaaaaa aaaaaa                     1606
//