ID AF200624; SV 1; linear; genomic RNA; STD; VRL; 2793 BP. XX AC AF200624; XX DT 02-NOV-2000 (Rel. 65, Created) DT 02-NOV-2000 (Rel. 65, Last updated, Version 1) XX DE Peanut stripe virus clone SN-Nib3 pol protein (pol) gene, partial cds. XX KW . XX OS Peanut stripe virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2793 RA Siriwong P., Chiemsombat P.; RT "Nucleotide sequence of 3' terminal genome of peanut stripe RT Potyvirus-severe necrotic strain"; RL Unpublished. XX RN [2] RP 1-2793 RA Siriwong P., Chiemsombat P., Wongkaew S., Ikegami M.; RT "Biological and Molecular properties of a severe necrotic strain of peanut RT stripe Potyvirus from Thailand"; RL Unpublished. XX RN [3] RP 1-2793 RA Siriwong P., Chiemsombat P.; RT ; RL Submitted (30-OCT-1999) to the INSDC. RL Plant Pathology, Dept. of Plant Pathology, Faculty of Agriculture, Khon RL Kaen University, Mittrapab Road, Muang, Khon Kaen 40002, Thailand XX DR MD5; 3e434301ec019f0c2708ab6b46484f47. XX FH Key Location/Qualifiers FH FT source 1..2793 FT /organism="Peanut stripe virus" FT /strain="severe necrotic strain" FT /mol_type="genomic RNA" FT /clone="SN-Nib3" FT /db_xref="taxon:28353" FT CDS <1..2523 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /db_xref="GOA:Q9E7S6" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q9E7S6" FT /protein_id="AAG28576.1" FT /translation="QPDKIAWGSLNLVSDQLKEEFKVSKLISDLFGGTVATQSKQQWVL FT ESAEGNLKACARADSALVTKHVVKGKCPYFEQYLRERSEAAAFFKPLMGAYQPSKLNKE FT AFKKDFFKYNKVVILNEVCHEAFEAAFNGVVRMMMEHGFSECSYVTDPDEIYSSLNLKA FT AVGAQYKGKKQDYLCDMDEFNKERLLYLSCERLFYGKKGLWNGSLKAELRPLEKVEANK FT TRTFTAAPIDTLLGAKVCVDDFNNQFYSLNLECPWTVGMTKFYGGWDTLMRKLPDGWIY FT CHADGSQFDSSLTPLLLNSVLGIRRFFMEDWWVGEEMLENLYAEIVYTPILTPDGTVFK FT KFRGNNSGQPSTVVDNTLMVVMSVYYSCHKVGWSDEDIQERLVFFANGDDIILSVQETD FT LWVLDTFTKSFGELGLNYDFSERTRKREDLWFMSHCAIQVDGIYIPKLEPERVVSILEW FT DRSKEMMHRTEAICAAMIEAWGYPELLQEIRKFYLWLLERDELREIAASGGAPYIAESA FT LKTLYTNKGTRIEELAKYLAVLDFDYEVGCGESVHLQSGSSTQPPVVDAGVDTGKDEKE FT KSNKGKGSESSEGSGNTSRGTENQSMRDKDVNAGSRGKVVPRLQKITKKMNLPMVKGNV FT ILNLDHLLDYKPEQTDLFNTRATKMQFEMWYNAVKGEYEINDEQMSIVMNGFMVWCIDN FT GTSPDVNGTWVMMDGDEQVEYPLKPMVENAKPTLRQIMHHFSDAAEAYIEMRNSERPYM FT PRYGLLRNLRDKNLARYAFDFYEVTSKTSDRAREAVAQMKAAALSNVNSKLFGLDGNVA FT TTSENTERHTARDVNQNMHTLLGMGSAQ" FT mat_peptide <1..114 FT /gene="pol" FT /product="nuclear inclusion protein a" FT /note="NIa" FT mat_peptide 115..1662 FT /gene="pol" FT /product="nuclear inclusion protein b" FT /note="NIb; RNA polymerase" FT mat_peptide 1663..2520 FT /gene="pol" FT /product="coat protein" FT 3'UTR 2524..2793 XX SQ Sequence 2793 BP; 881 A; 481 C; 711 G; 720 T; 0 other; caacccgaca aaatagcttg gggttcattg aatcttgtta gtgatcagct aaaagaagaa 60 ttcaaagttt caaaacttat ctcagatctt tttggtggca cagtggcaac acagagcaag 120 cagcagtggg ttttggagtc cgctgaaggc aatctaaagg catgcgcaag agctgacagc 180 gcattggtaa caaagcatgt tgtgaagggc aagtgtccat actttgagca gtacttgaga 240 gagcggagtg aagcagctgc attcttcaag cctttgatgg gtgcatacca accaagcaaa 300 cttaacaagg aagcatttaa gaaagacttc ttcaaataca acaaagttgt aatactgaat 360 gaagtttgcc atgaagcgtt tgaagcagct ttcaatggtg ttgtgaggat gatgatggag 420 cacggttttt ctgagtgctc ttatgtaaca gacccagatg aaatatactc atcattgaac 480 ctgaaggcag cagttggagc acaatacaaa gggaaaaagc aggactatct ttgtgatatg 540 gatgaattca acaaggaaag acttttgtac ctgagttgtg agagattgtt ctatggcaag 600 aaagggcttt ggaatggttc tttgaaggca gagttgaggc cattagagaa ggttgaggct 660 aacaaaacac gtaccttcac agctgctccc attgatacat tacttggagc aaaggtttgt 720 gtggatgatt tcaacaacca attttatagt ctcaacttgg aatgcccatg gactgtaggg 780 atgacaaaat tctatggagg atgggacacc ctaatgagaa agttgcctga tgggtggatt 840 tattgtcatg cagatggttc acaatttgat agttcgttaa caccactcct cctcaactca 900 gtccttggga tcagaagatt cttcatggag gattggtggg ttggtgaaga gatgcttgaa 960 aatctgtatg ctgagattgt gtacacacct atactaacac cagatggaac agtgtttaaa 1020 aagttcaggg gaaacaacag tggacaacct tccacagtcg tggacaacac actcatggtt 1080 gttatgtcag tgtattattc atgtcacaaa gtgggctgga gtgatgaaga catccaggag 1140 cgcttggttt tctttgccaa tggggatgac atcatacttt ctgtgcaaga gacggatctc 1200 tgggtccttg acacatttac caaatcattt ggagaacttg gcctgaatta tgacttcagt 1260 gagagaacaa gaaagaggga agatctctgg ttcatgtcac actgtgcgat tcaagttgat 1320 ggaatatata ttccaaaatt agaaccagag cgtgttgttt caatcctaga gtgggatagg 1380 agcaaagaaa tgatgcacag gactgaagca atctgtgcag caatgattga agcatggggc 1440 tatcctgaat tgctccaaga aattagaaaa ttttatttgt ggttgcttga gagggacgag 1500 ctcagagaga ttgcagccag tggaggagct ccatacatag cagaatcagc actcaaaaca 1560 ctttacacca acaaaggaac aagaattgaa gagttggcaa agtatttggc cgtgcttgat 1620 tttgattatg aagttggatg tggagaatct gtgcatctac aatcagggag cagcacacaa 1680 ccaccagtgg tggatgctgg cgtggatact ggcaaggatg agaaagagaa gagcaataaa 1740 ggaaaaggct ctgaaagcag tgaaggatca ggcaacacta gccgtggaac agagaatcag 1800 tcaatgagag acaaggatgt gaatgctggt tcaagaggaa aggttgttcc tcggcttcag 1860 aagatcacaa agaaaatgaa tttgccaatg gtgaaaggga atgtgatctt gaatttggac 1920 catctgttag attacaagcc agagcaaact gatcttttca acacaagagc aacaaagatg 1980 cagtttgaga tgtggtacaa tgctgtgaag ggcgagtatg agataaatga tgaacagatg 2040 tcaattgtga tgaatggctt tatggtgtgg tgtattgaca atggcacttc accagatgtg 2100 aatggaacat gggtgatgat ggatggagat gagcaagtgg aatatcctct caaaccaatg 2160 gttgagaatg caaaaccaac acttcggcaa atcatgcacc atttctcaga tgcagctgaa 2220 gcatatattg agatgagaaa ttccgaacga ccgtacatgc ctaggtacgg attgcttcgg 2280 aatttgaggg acaaaaattt agctcgctac gctttcgact tctatgaagt aacctctaag 2340 acatcagatc gtgcaaggga agcagtagca cagatgaagg cagcagccct cagcaatgtt 2400 aacagcaagt tgtttggact tgatgggaat gtggcaacaa ccagcgagaa tactgaaagg 2460 cacactgcaa gggacgtcaa tcagaacatg catacacttc ttggcatggg ttctgcgcag 2520 tagagattgg gtcaactgat cacagttaga atctcgcgtc gctaaataat ttcatatagt 2580 agtcttttat gttctcttta gtttcagtgt ggttttacca ccattgtcta actattgtga 2640 tagtgtggtt ggtccaccaa catattgtga gtactttatg tttataagta agccggaaga 2700 accattgcaa tggtgaggac gtgcagagtg attctatcac gtgtcatggg gtagctacgg 2760 caatgcttgt tgtgccaaaa aaaaaaaaaa aaa 2793 //