ID AF198102; SV 1; linear; genomic RNA; STD; VRL; 3038 BP. XX AC AF198102; XX DT 09-APR-2002 (Rel. 71, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Cucumber mosaic virus segment 2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3038 RA Yang R., Jones M.G.K., Dwyer G.I.; RT ; RL Submitted (25-OCT-1999) to the INSDC. RL WA State Agricultural Biotechnology Center, Murdoch University, South RL Street, Murdoch, WA 6150, Australia XX DR MD5; ad9227f24d26c00f65014cc0596a3815. DR EuropePMC; PMC136033; 11884564. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3038 FT /organism="Cucumber mosaic virus" FT /segment="2" FT /isolate="LY" FT /mol_type="genomic RNA" FT /note="originally found infecting Lupinus angustifolius FT subgroup: II" FT /db_xref="taxon:12305" FT CDS 93..2615 FT /codon_start=1 FT /gene="2a" FT /product="2a protein" FT /note="Orf2a" FT /db_xref="GOA:Q8QVF9" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q8QVF9" FT /protein_id="AAM10537.1" FT /translation="MTSPPPTFSFANLLNGSYGVDTPEEVERVRREQREDAEAALRNYK FT PLPTVDVSESVPRDEPIVSQTVTTAPVTSAVDAFVSFGAEDYLEMSPSELLSAFELMVK FT PLRIGEVLCPNFDRSLFISSVAMARTLLLAPLTSTRTLKRFEDLVAAIYLKTDFFLEDD FT GPQTDVSQSDVPGYTFEPGQHSSGFEPPPICAKCDLILYQCPCFDFNALRESCAEKTFS FT HDYVIEGLDGVIDNATLLSNLGPFLLPVHCSYSKTEDPDFVVDPSLARPTDRVDAHVVQ FT AVCDTTLPTYVNYDDSFHQVFVDSADYSIDMDHVRLRQSDLVAKIPDGGHMLPVLNTGS FT GHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERLRLSYMNVDALAKSNFVN FT VVGNFHAYMQKWQSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVTDTLNVDRPVPATI FT TFHKKTITSQFSPLFISLFERFQRCLRERIVLPVGKISSLEMTDFSVLNKHCLEIDLSK FT FDKSQGEFHLMIQEHILNDLGCPAPVTKWWCDFHRFSYIKDKRAGVGMPISFQRRTGDA FT FTYFGNTIVTMAEFAWCYDTDQFDRLLFSGDDSLAFSKLPPVGDPSKFTTLFNMEAKVM FT EPAVPYICSKFLLSDEFGNTFSVPDPLREIQRLGTKKIPYSDNNDFLFAHFMSFVDRLK FT FMDRMSQSCIDQLSIFFELKYKKSGNETAQVLGAFKKYTANFNAYKELYYSDRQQCDLI FT NTFCISEFQVIRRTTVKKKKNGRVDSSGVDRRPPPSPFAGGETSKTKVSRQKPASEGLQ FT KSQRESAIYSEIFPDVTIPRSRSRGLVS" FT CDS 2413..2715 FT /codon_start=1 FT /gene="2b" FT /product="2b protein" FT /note="Orf2b" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q8QVF8" FT /protein_id="AAM10538.1" FT /translation="MDVLTVVVSTADLHLAHLQEVKRRRRRSHVKNRRARGYKSPSERA FT RSIARFFQMLPFHGVDPVDWFPDVVRSPSVTSLVSCESFDDTDWFAGNEWAEGSF" XX SQ Sequence 3038 BP; 724 A; 698 C; 677 G; 936 T; 3 other; gtttattctc aagagcgtat ggttcaaccc ctgcctcctc tgtgaaatta ccctagtttt 60 attgatctac ttctagtctc ttttctgtta ctatgacaag tcctccaccc actttctcat 120 tcgccaatct gttgaatggc tcctatggtg ttgacactcc cgaggaagtg gaacgcgtta 180 gacgtgaaca acgcgaagat gctgaggcgg ctttacgtaa ttataagcct ttacccactg 240 tggatgtcag tgagagtgtc cctagagacg aacctattgt ctcgcaaacc gtcactacag 300 ctcctgttac atcagccgtt gacgcgtttg tttcttttgg tgctgaggac taccttgaaa 360 tgtccccatc tgagctgctt tccgcttttg agttgatggt caaacccttg cgtatcggtg 420 aagtgttgtg cccgaatttt gatcgttcgc tattcatctc cagcgtcgct atggctagga 480 cgttgttgtt ggcaccactc acatccaccc gaacgttgaa gcgttttgaa gaccttgtgg 540 ccgcgatcta tctaaaaact gatttttttt tagaagacga tgggccccag actgatgtct 600 cccaaagcga tgtgcccggt tataccttcg aaccagggca acactcatcc ggttttgaac 660 ccccccctat ttgtgctaaa tgtgacttga ttttgtatca atgtccgtgt ttcgatttta 720 acgcacttcg tgagtcttgc gcagagaaaa cattctctca cgactatgtt atcgagggtc 780 tcgatggtgt cattgataac gctacgctgt tatcaaattt gggaccattt ttgttacctg 840 tccattgttc ttattcaaag accgaggacc ccgatttcgt cgttgatcct agtcttgcgc 900 gacctactga tagggttgat gcacatgtag ttcaagccgt ttgcgatacc actctgccca 960 cctatgttaa ctacgatgat tcctttcatc aagtctttgt ggactctgct gattattcca 1020 ttgacatgga tcacgttcgg ttacgtcaat ccgatttagt agcaaaaatt ccggatggtg 1080 ggcatatgtt accggtgttg aataccggga gtggtcacaa gagagtaggt actacgaagg 1140 aggtcttaac agcaataaag aaaagaaatg ctgatgtccc tgagcttggt gactctgtta 1200 atctgtcacg cctgagcaaa gcagtagccg aacggcttcg tctctcgtat atgaatgttg 1260 acgctttggc taaaagtaac tttgttaatg ttgtcggtaa ttttcacgct tacatgcaaa 1320 aatggcaatc ttctggactt tcttatgatg atcttcctga tcttcacgcg gagaatttac 1380 agttttatga tcacatgatt aagtccgatg ttaagccagt tgtcaccgac acgttgaacg 1440 tcgacagacc tgtcccagct actattacat ttcacaaaaa gaccataaca tcccagttct 1500 caccgttgtt tatatctctg tttgagagat tccagagatg ccttcgggaa cgtattgttc 1560 tgcccgttgg taagatttcc tcccttgaga tgactgattt ttcagtcttg aacaaacatt 1620 gtcttgaaat tgatttatct aaattcgaca aatctcaagg tgagttccac cttatgattc 1680 aagagcacat tctcaacgat cttggttgcc cagcacccgt caccaaatgg tggtgtgact 1740 ttcataggtt ttcctatatt aaagacaaac gtgctggggt tggaatgccc atcagctttc 1800 aacgccgtac tggtgacgct ttcacctatt ttggcaatac tattgtcacg atggctgagt 1860 ttgcttggtg ttatgacact gaccaatttg accgattgct cttttctggt gatgattctc 1920 tggctttttc taagctccca cctgttggag atcccagtaa gtttacaact ttattcaaca 1980 tggaagctaa ggtgatggaa cctgcagtac cttatatttg ttcgaagttt ctactctctg 2040 atgagtttgg taatacgttt tcagtccccg acccactacg tgaaatccag cggttaggta 2100 ccaagaagat accgtactcg gacaacaacg atttcttgtt cgctcatttt atgagttttg 2160 ttgacaggct gaagtttatg gacaggatgt cgcagtcctg tattgatcaa ttgtccattt 2220 tcttcgagtt gaaatacaag aagtccggga acgaaaccgc ccaagttttg ggcgcgttta 2280 agaagtacac cgctaatttt aacgcctata aggagcttta ttactctgac cgtcaacaat 2340 gtgacttgat caatacgttt tgtatatctg agttccaggt gattcgtcgc actaccgtta 2400 agaagaagaa gaatggacgt gttgacagta gtggtgtcga ccgccgacct ccacctagcc 2460 catttgcagg aggtgaaacg tcgaagacga aggtctcacg tcaaaaaccg gcgagcgagg 2520 ggttacaaaa gtcccagcga gagagcgcga tctatagcga gatttttcca gatgttacca 2580 ttccacggag tagatcccgt ggattggttt cctgatgtcg ttcgctctcc gtccgttacc 2640 agccttgttt cttgtgaatc ttttgatgat accgattggt ttgctggtaa cgaatgggcc 2700 gaagggtcgt tttgatttcc gacccttcgt cgtccgaaga cgttaaatta cactctcttt 2760 attgcgagtg ctgagttggt agttttcctc taaactatct gaagtcgcta aatccattac 2820 tggttgcgaa cgggttgtcc atccagctta cggctaaaat ggtcagtatg ccccaaaggc 2880 atgccgacac cctacagggt tgtcgaggta cccttgaaat catctcctan atttcttcgg 2940 aagggcntcg tgagaagctc gtgcacggta ntaccctgat attaccaaga gtgcgggtat 3000 cgcctgtggt tttccacagg ttctccataa ggagacca 3038 //