ID AF195000; SV 2; linear; genomic RNA; STD; VRL; 6364 BP. XX AC AF195000; XX DT 22-NOV-1999 (Rel. 61, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Chayote mosaic tymovirus, complete genome. XX KW . XX OS Chayote mosaic virus OC Viruses; Riboviria; Tymovirales; Tymoviridae; Tymovirus. XX RN [1] RP 1-6364 RA Bernal J.J., Jimenez I., Moreno M., Moreira L., Rivera C., RA Rodriguez-Cerezo E.; RT "Serological and molecular characterization of chayote mosaic virus, a new RT tymovirus infecting Cucurbitaceae"; RL Unpublished. XX RN [2] RP 1-6364 RA Bernal J.J., Jimenez I., Moreno M., Moreira L., Rivera C., RA Rodriguez-Cerezo E.; RT ; RL Submitted (14-OCT-1999) to the INSDC. RL Plant Molecular Genetics, Centro Nacional de Biotecnologia CNB-CSIC, Campus RL de Cantoblanco, Madrid 28049, Spain XX RN [3] RC Sequence update by submitter RP 1-6364 RA Bernal J.J., Jimenez I., Moreno M., Moreira L., Rivera C., RA Rodriguez-Cerezo E.; RT ; RL Submitted (26-MAY-2000) to the INSDC. RL Plant Molecular Genetics, Centro Nacional de Biotecnologia CNB-CSIC, Campus RL de Cantoblanco, Madrid 28049, Spain XX DR MD5; 44634a384a0118ce54184751dc93020f. DR EuropePMC; PMC112128; 10864632. XX CC On May 26, 2000 this sequence version replaced gi:6456716. XX FH Key Location/Qualifiers FH FT source 1..6364 FT /organism="Chayote mosaic virus" FT /strain="Chayote (Sechium edule)" FT /mol_type="genomic RNA" FT /db_xref="taxon:71030" FT CDS 140..2182 FT /codon_start=1 FT /product="overlapping protein" FT /note="movement protein; OP" FT /db_xref="InterPro:IPR004935" FT /db_xref="UniProtKB/TrEMBL:Q9QCX4" FT /protein_id="AAF09239.1" FT /translation="MSNVVPTSLGRSLPYYSPGLLCLPGSGLCVPTTPLLHSGLPMDSP FT KGTPAVPHPIRDPNLRIRFNPPPSPSSQGPRDQPSVQPLEPPLPGSLDRAFHEALKIQE FT ASGSQPPLLPTPQLPAVLRRHSPVPHHQLYPPHLNQRVHARRADVLPPQSNTGPLSPMP FT PTRDALLQSRDSPRVRLHGLLPLPSSVPIPSDRLVSPLHPRKPSRRQLQPAFSRPKLVE FT SALHHLSPPHSQHHQAGVLGPPPLHSSPERPSSPTPSFHSCSSSVSSTDSLPLNPLFLR FT LRFDRQSPILPDPGLLGAAPSHLPPPTSPSSSRSHQGVRGSVHLHSGRPNPSRLGSRRL FT RSHAQQQTRALLGNVPSLGQSTNVRPAKRPHPTPRHVQLLPQPGSQAAPSRSTTLAVDP FT TKGIPCVVRFGSLPPLPISPDYPPSPLGKYPRPPPYVLPKPRLSPKPPSRSKPLRRGFL FT PPSTSSPLLPSPVPAPNGKGLLPLPLPRRPCKPSSTPRPHHPHRKSHSHLPNQPASKVP FT SFPHPSIPTMSQPPSLPSSSSGPPRHLPLRSPSPPVSAPMEAPQLPCVESPPLSPPLSH FT PPSSPELIVYRPRRSASLSPHSHHPGARVRFSSFRSRSFSPRRSSPAQSHRPLSDPHPS FT SNFRSQLSSYFGDSPTPSCYLNRFSLLDSGLHSSSVCTDWLPKPQ" FT CDS 147..5654 FT /codon_start=1 FT /product="replication protein" FT /note="RP" FT /db_xref="GOA:Q9QCX3" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008043" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9QCX3" FT /protein_id="AAF09240.1" FT /translation="MSFQLALDALSHTTHRDSSVFPVLDSVSQPLRSSIQDYPWIVPKE FT HLPFLIQSGIQISGFGSTPHPHPVHKVLETNLLFNHWNHLCRVPSTVLFMKPSKFRRLQ FT EANPHFSQLLNYRLSSADTARYPTTSSILPTLTNAFMHDALMYFHPSQILDLFLQCPQL FT ETLYCSLVIPPESDFTDFSLYPHLYQFQVTGSSLHYTPESHHAGSYNQPSLALSWLKVH FT SITSPHLTLSITKLESWGPLHSILVQRGLPLQHPLSIHAPPPSPPQTLSLSTPSFSDFA FT STDSLQSFQTPDCLELPQATFLHQPLRHRLVPTKVYEALFTYTRAVRTLRVSDPAGFVR FT MHSNKPEHSWVTSQAWDNLQTFALLNAPIRPPAMYSFFLNPVRKLLLVARQHWQSILLK FT VSPALSASVLFLLSQSHLITLPLPSVNIRGLLPTFSRSPAYPPNPLLDQSPSEEAFSRH FT LHLLLSSLPQSLPQMAKDFFLSLSPVDPASPPRPPALTIRTVKAIPIFQTSLPVRFLLS FT LTPQFLLCLNRLLSPLPLQALHDTYHSVLHPPQFRLQWKLRSFHVSKAHPFLPLSLTPP FT PLLSSSSTAPDVPPLFPPIHIIPEPESASPPSEAALSLPADLPQPNLTAPSLTPTPAPT FT SEASSQATSATPLPPAVTSIDSPSLTQASIPPQSAQTGCPSPSEILFPESSGSPTVLPT FT GALTFSNSPSSPQTSLQSKKSPPPTPLESDPSCTGPVVPFSEAFPAYYYSDTASFHTRV FT RCLPPSQIAVPALCCLLEAFSSETKLPVDDLWLTLRSHLPDSLLSNSEISTYGLSTDLL FT TALCFFYHLRCSLHTNSGVLLFGIQNSEQHICITHTSGPPAHYSPGARLNGSAPRSNPL FT NSPLVRAALRFKYQNHFLPFERAHAFTTSLPHAKNLISNMKNGFDGILSSLDSPSSSGP FT SPREKLFAIDALIDSTQARTVPIIHIAGFAGCGKTHPIQQLLRTPLFRDFRVSCPTTDL FT RSEWKDDMKPSPPNVWRFSTWESSLLKTSSVLVIDEVYKLPSGYLDLSILSDPAIQLVI FT LLGDPLQGEYHSTSLSSSNSRLESEITRLSPFIDCYCWWSYRIPQSVAEVLDVTSFNPT FT RGFIRASLTHPQNSKNLVNSIATANALQHMGHHAMTISSSQGVTFSEANTILLDRNTNQ FT LSPNTCLVGLTRSRTGVIFVGNLHLASNSFGTCYIFSRALSGQPIDYASLFPRVFPTLR FT RIFSPITSRKTRLLGGFSLVSHDTNLPLFARLLAFRSLSLPPHIPVSHSSDVLITSAQV FT FSTLEESRLSTLHLPPTRLPLHYDLPPAAPSPPPAPAVDFSGLTPISHAFAGEFFDSLA FT AFFLPPHDPQTREHPDPSIQSNQFPWVDLPFELSCQPSSLIAAKHSPSSDPLLLSASLS FT KRLRFRPSENPYSITPMDQLLGEHLFASLQRAYKRPVEQILPFHPELFAECICANEYAQ FT LSSKTQATIVANHTRSDPDWRFTAVKIFAKSQHKVNDGSIFGSWKACQTLALMHDYVIL FT VLGPVKKYQRLFDDRDRPPNLYIHRGQTPLDLSHFCSSHSLPSKFVANDYTSFDQSQRG FT EAVVLELLKMQRLSIPSHLQALHLFLKTNVRTQFGPLTCMRLTGEPGTYDDNTDYNLAT FT IFSQYAITDQPVFVSGDDSVIASEPPQSPSWRDVLPMLNLRFKTEHTRYPLFCGYYLTP FT QGAIRNPLALFAKLMICVDDGSVKDKILSYISEFSVGHSAGDTILHHLPSHLLPYHSAC FT FDFFCRFATPSQKLTLSLDPIPESIWMSLIHKIRWASRSLFSQLPQKARDYLISRSHLS FT SSSLLHSDSQPESELLPFLN" FT CDS 5662..6237 FT /codon_start=1 FT /product="virion protein" FT /note="coat protein; VP" FT /db_xref="GOA:Q9QCX2" FT /db_xref="InterPro:IPR000574" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q9QCX2" FT /protein_id="AAF09241.1" FT /translation="MSANVPVKVPQPSVPAPAKSLPTPSSELSSAIVLPFQILATTFGS FT VETAFQISLSSHPSLQKLMAPYRHVQLVECEAVFCPNSFAVSAPITINAVWTTANSPAS FT PVDILQIYGGRPFTFGGSLQSTSESILPLPGNFTNAMLKDSVAYLDTPKLLAYSPVPSS FT PSKLPSVHLLIRGKLRLSSPLLLASPSS" XX SQ Sequence 6364 BP; 1170 A; 2597 C; 1020 G; 1577 T; 0 other; gtaatctgaa ccactgctgg ccgtcttttg accctcagct tttattttac tgcttttcaa 60 tttccttccc acgtgaaagc ccttctcacg aagccctttc accttcttct gcccaattgc 120 ctgcccccgc acccaattga tgtctaatgt cgttccaact agccttggac gctctctccc 180 atactactca ccgggactcc tctgtcttcc cggttctgga ctctgtgtcc caaccactcc 240 gctcctccat tcaggactac ccatggatag tcccaaagga acacctgccg ttcctcatcc 300 aatccgggat ccaaatctcc ggattcggtt caacccccca ccctcaccca gttcacaagg 360 tcctcgagac caaccttctg ttcaaccatt ggaaccacct ctgccgggtt ccctcgaccg 420 tgcttttcat gaagccctca aaattcagga ggcttcagga agccaacccc cacttctccc 480 aactcctcaa ctaccggctg tcctccgccg acacagcccg gtaccccacc accagctcta 540 tcctccccac cttaaccaac gcgttcatgc acgacgcgct gatgtacttc caccccagtc 600 aaatactgga cctctttctc caatgccccc aactcgagac gctctattgc agtctcgtga 660 ttcccccaga gtccgacttc acggacttct ccctctaccc tcatctgtac caattccaag 720 tgaccggctc gtctctccat tacacccccg aaagccatca cgccggcagc tacaaccagc 780 cttctctcgc cctaagctgg ttgaaagtgc actccatcac ctctccccac ctcactctca 840 gcatcaccaa gctggagtct tggggccccc tccactccat tctagtccag agaggccttc 900 ctctccaaca ccctctttcc attcatgctc ctcctccgtc tcctccacag actctctccc 960 tctcaacccc ctctttctcc gacttcgctt cgaccgacag tctccaatcc ttccagaccc 1020 cggattgctt ggagctgccc caagccacct tcctccacca acctctccgt catcgtctcg 1080 ttcccaccaa ggtgtacgag gctctgttca cttacactcg ggccgtccga acccttcgcg 1140 tctcggatcc cgcaggcttc gttcgcatgc acagcaacaa acccgagcac tcttgggtaa 1200 cgtcccaagc ttgggacaat ctacaaacgt tcgccctgct aaacgccccc atccgacccc 1260 ccgccatgta cagcttcttc ctcaacccgg ttcgcaagct gctcctagtc gctcgacaac 1320 actggcagtc gatcctacta aaggtatccc ctgcgttgtc cgcttcggtt ctcttcctcc 1380 tctcccaatc tcacctgatt accctccctc tcccctcggt aaatatccga ggcctcctcc 1440 ctacgttctc ccgaagcccc gcttatcccc caaaccccct tctagatcaa agcccctcag 1500 aagaggcttt ctcccgccat ctacatcttc tcctctcctc ccttccccag tccctgcccc 1560 aaatggcaaa ggacttcttc ctctccctct cccccgtcga ccctgcaagc cctcctcgac 1620 cccccgccct caccatccgc accgtaaaag ccattcccat cttccaaacc agcctgccag 1680 taaggttcct tctttccctc acccctcaat tcctactatg tctcaaccgc cttctctccc 1740 ctcttcctct tcaggccctc cacgacactt accactccgt tctccatccc ccccagtttc 1800 ggctccaatg gaagctccgc agcttccatg tgtcgaaagc ccaccccttt ctccccctct 1860 ctctcacccc ccctcctctc ctgagctcat cgtctaccgc ccccgacgtt ccgcctctct 1920 ttccccccat tcacatcatc ccggagcccg agtccgcttc tcctccttcc gaagccgctc 1980 tttctctccc cgccgatctt ccccagccca atctcaccgc cccctctctg acccccaccc 2040 cagctccaac ttccgaagcc agctctcaag ctacttcggc gactccccta cccccagctg 2100 ttacctcaat cgattctccc tccttgactc aggcctccat tcctcctcag tctgcacaga 2160 ctggctgccc aagccccagt gaaattcttt ttcctgaaag ctcagggagc ccgactgtcc 2220 tcccaaccgg ggctctcacc ttctccaact ctccctcatc cccccaaacc tccctccagt 2280 ccaagaagag tcccccgccc accccccttg agtctgaccc ctcttgcacc ggccctgtgg 2340 tgcctttttc tgaggctttc ccagcctact actactctga cacggcctcc ttccacacac 2400 gcgtcagatg cctccccccc tctcaaatcg cagtgccagc cctctgttgc ctcctggaag 2460 ccttctcctc cgagaccaag ctcccagttg acgacttgtg gctcacgcta cgatctcacc 2520 tccctgactc cctgctttcc aactctgaga ttagcaccta tggtctttca acagacttgc 2580 tcaccgctct ctgttttttt taccacctgc gctgctctct ccacaccaat tctggagtct 2640 tgctcttcgg aattcaaaat tccgaacaac acatctgcat cacacacact tctggccccc 2700 cagcccacta ttctcccgga gcccgcttga acggctcggc cccgcgttcc aaccctctca 2760 acagcccatt ggttcgcgct gccctgcgct tcaaatacca aaatcacttt ctaccctttg 2820 agcgtgctca tgccttcacc acttctctcc cccatgccaa aaacctgatc tccaacatga 2880 agaacgggtt cgatggcatt ctctcctccc ttgactcccc ctcttcttcc ggtccttccc 2940 ctcgcgagaa actgttcgcc atcgacgctc tcatagactc cacccaagcc cgcactgtac 3000 caatcatcca catcgctggt ttcgctggtt gcggcaagac tcaccccatc caacagcttc 3060 tccgcactcc cctctttcgc gacttccgtg tctcctgccc caccacagac ctccggtctg 3120 agtggaagga tgacatgaag ccttcccccc ctaatgtctg gcgcttctcc acctgggagt 3180 cctctctcct gaagacctcc agcgtgctcg tcatcgacga ggtttacaaa ctccctagcg 3240 ggtacctaga cctctccatc ctctctgacc ccgccatcca actcgtcatc ctgctcggcg 3300 accctctgca aggcgaatac cactccacct ctctttccag ctcgaactct cgcctggaat 3360 ccgaaatcac acgcctctcc cccttcatcg attgctactg ctggtggtcc taccggatcc 3420 ctcaaagcgt cgctgaagtc ctcgacgtca cttcattcaa ccccacccga ggtttcattc 3480 gcgcgtcact gactcaccct cagaacagca aaaacctcgt caactccatc gctacagcca 3540 acgccttgca gcacatgggc caccatgcca tgaccatcag ctccagccag ggagtaacct 3600 tctccgaagc taataccatc ctcctcgacc gcaacaccaa ccagctctct cccaacacct 3660 gcctcgtagg tctcacccgt tctcggacgg gtgttatttt tgttggcaat cttcacctcg 3720 cctccaactc attcggaacc tgctacatct tctctcgcgc cctctccgga cagccgattg 3780 actatgccag cctcttcccc agagtcttcc ccacccttcg acgcattttc tcccccatca 3840 cctctcgaaa gacccgtctt ctgggcggtt tttctctcgt gagccatgac accaacctgc 3900 ccctcttcgc tcgtctgctg gcttttcgtt ctctctctct tcccccccat atccccgtct 3960 cccactcctc agatgttttg atcacttctg cccaagtctt ctccacactt gaggagtccc 4020 gactctccac ccttcatctt ccccccaccc gcctccccct tcactatgac cttcctcccg 4080 ccgctccctc accccccccc gctcctgcag ttgacttctc tggtctcacc ccaatctctc 4140 atgccttcgc cggagagttt ttcgactctt tggccgcttt cttccttccc cctcacgacc 4200 ctcaaactcg cgaacaccct gacccctcca ttcagtccaa ccaattccct tgggtcgatc 4260 ttccctttga gctctcttgt cagcccagtt ctctcatagc cgccaaacat tctccatctt 4320 ccgaccctct gctgctctcc gcctccctct ccaaacgctt aaggtttcgc ccttccgaga 4380 atccatactc catcacccca atggatcagc ttctcggcga gcaccttttc gcctctttgc 4440 agagggctta caaaaggcct gttgagcaga ttcttccttt ccatcctgag ctattcgccg 4500 agtgcatctg cgcgaacgag tatgctcagc tctcttccaa gacccaagcc accatagtcg 4560 ccaaccacac ccgctccgac cctgactggc gcttcaccgc tgttaaaatc tttgccaagt 4620 cccaacacaa ggtcaatgat ggttccatct tcggctcctg gaaggcctgc caaacattag 4680 ccctgatgca cgactacgtg atccttgtgc tcggacctgt caagaagtac cagcgcttat 4740 tcgacgaccg cgaccgcccc cccaatctct acatccatcg tggccaaacc cctctagacc 4800 tttcccactt ctgctcctcc cactccctgc cttcgaagtt cgtggccaac gactacactt 4860 cctttgacca atctcaaagg ggtgaagccg tcgtcctcga acttcttaaa atgcagcgtc 4920 tctccattcc ctctcatctc caggccctcc atcttttcct caaaaccaac gtccgaacgc 4980 aattcggccc actcacctgc atgcgtctga ccggcgaacc cggcacctat gacgacaaca 5040 ctgactacaa tctggccacc atttttagtc agtacgccat aaccgaccaa ccagtcttcg 5100 tctcaggtga tgattccgtt attgcttcag aaccccctca atctccttct tggcgtgacg 5160 tgctccccat gcttaatctc cgttttaaga ctgagcacac ccgctaccct ctcttctgcg 5220 gctattacct gactcctcag ggcgccatcc gcaaccccct tgcccttttc gccaaactga 5280 tgatctgcgt tgacgacgga agtgtcaaag acaagattct gtcctacatt tccgagttct 5340 ccgtcggtca ctcagccggt gacactattc tccatcacct cccctcccac cttctcccct 5400 accactccgc ctgcttcgac ttcttctgcc gctttgccac tccctctcaa aagttgaccc 5460 tcagcctcga ccctattccc gaatccattt ggatgtcctt gatccacaag attcgctggg 5520 cgagccgctc tctattctcc caacttcccc agaaagcccg tgactacctt atctcccgga 5580 gtcatctgtc ttcatcctcc cttctccatt ctgactccca acctgagtct gaattgctcc 5640 cctttctcaa ttaatgcaat catgtctgcc aacgtcccag tcaaagtgcc ccagccctcc 5700 gtcccagccc ccgcaaagtc cctccccacc ccatcttcag agctctctag cgccatcgtg 5760 ctccccttcc agattctcgc caccaccttc ggctctgtcg aaaccgcctt ccaaatctcc 5820 ctctcctctc acccctccct ccagaagctc atggctccgt accgccacgt gcagctcgtg 5880 gaatgcgaag ccgtcttctg ccccaactcc ttcgctgtct cagcccccat caccattaat 5940 gccgtctgga ccactgccaa ctcccctgct tcccccgtcg atatactcca gatctacggc 6000 ggccgcccct tcaccttcgg cggctccctc caatccacct ctgaatccat tctccctctc 6060 ccagggaact tcacaaacgc catgctcaag gacagcgtgg cgtacctcga cacccccaaa 6120 cttctcgcct attctcctgt cccctcctct ccctctaagc tgccgtcagt tcacctcctg 6180 atccgaggta aactccgcct ctcttccccc ctcctcctcg cctccccgtc ctcttagatc 6240 cgtggtgcca acgtcatggc atagagtttc gctgtcctct caaatcgaac agcaatggtc 6300 gtgcccgacc cgctcggaat gcgataattc tggtgcttgc cccccaccta aaaagggggc 6360 acca 6364 //