Dbfetch
ID AF192260; SV 1; linear; genomic DNA; STD; VRL; 5454 BP. XX AC AF192260; XX DT 27-OCT-1999 (Rel. 61, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Periplaneta fuliginosa densovirus, complete genome. XX KW . XX OS Periplaneta fuliginosa densovirus OC Viruses; Parvoviridae; Densovirinae; Ambidensovirus. XX RN [1] RP 1-5454 RX PUBMED; 11332273. RA Guo H., Zhang J., Hu Y.; RT "Complete sequence and organization of Periplaneta fuliginosa densovirus RT genome"; RL Acta Virol. 44(6):315-322(2000). XX RN [2] RP 1-5454 RA Guo H.T., Zhang J.M., Hu Y.Y.; RT ; RL Submitted (05-OCT-1999) to the INSDC. RL Virology, Wuhan University, Luojia Hill, Wuhan, Hubei 430072, P.R.China XX DR MD5; 0f80090a3e5fd51bad6f9f8bae82152b. DR EuropePMC; PMC115897; 11222696. DR EuropePMC; PMC3838256; 24109231. DR EuropePMC; PMC6071259; 30011943. XX FH Key Location/Qualifiers FH FT source 1..5454 FT /organism="Periplaneta fuliginosa densovirus" FT /mol_type="genomic DNA" FT /db_xref="taxon:97344" FT CDS 202..930 FT /codon_start=1 FT /product="structural protein" FT /note="ORF5" FT /db_xref="GOA:Q9QCZ5" FT /db_xref="InterPro:IPR013607" FT /db_xref="UniProtKB/TrEMBL:Q9QCZ5" FT /protein_id="AAF04300.1" FT /translation="MGSELRPLISEVQQERFSTDTNRIYNAGYSEIREPNWGLRNRISG FT WSERVRELTRPNNYSVIEGSDIELPISVDDDVHIPIEEETSFSVSVPEATETTGLLGTS FT VISAGTGVAGGAATGLAASDIGLGAGAVIGSGIVGYLGHKIISGLTYPFHHYLGPGNPL FT DNNEPVDRDDAIAEEHDKAYANAKSSIDVINADKKAIDHFSEDFEKNGNLHSLIGKTGL FT QIKTAIEQRFGVIYPSVSGT" FT CDS 965..2689 FT /codon_start=1 FT /product="structural protein" FT /note="ORF6" FT /db_xref="GOA:Q77NV0" FT /db_xref="InterPro:IPR003433" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q77NV0" FT /protein_id="AAF04301.1" FT /translation="MNEGQRQYSYEQWMLSRVRAGQRFTPPPLSGDERDRSPIRGGGTD FT SDTYPDDYIPRTPGRDIPELQEHSDHSIVRVEDSLPSTSHRNNDQIPDSIDVDMASHSG FT VPDSVGNPAGTGNDPETNGAGGEPPNKKAKTGGASSKKLPGTAKPQSLEGTGDRSIVYL FT ERPINPKNIVITTYKKQHKLLTFGIASKILNQKIAAVDNVNPAHVIYFLTTALAEVPVH FT KPVLYMNQSEYDLLPVGAEVLQVKVSVVQRNALLSFQTNASSTSLATLNQNKNGVYCIG FT LNKTGYGTNRRYTAFNATEKMIPEKCGPPVYAAVAEGYEGMLEDLYGVNNNVASFVTSL FT PKHQVGMYTTLKNYFCMTQTSLYTGGWPNLQSKVVEYDAAAVVGEPILTYVYQPKIAPL FT KPVQKYLPTQLPYRFSSEYVHGTLQSGFEVMTKNNTDTTKDVSYSSSNPRANIDMSFDI FT YTDIEKSQCMVRGIGGNMTPQIQPSLHIGINPVPALTTAAITGGDTNSSFTDTRSYFDV FT TCECVVGYRTYTDRPFASEYNCAAGEEIRGHNGKSLPFDSNTVPFAGLYVNASLSEQ" FT CDS 969..1466 FT /codon_start=1 FT /product="unknown" FT /note="ORF7" FT /db_xref="GOA:Q77NU9" FT /db_xref="UniProtKB/TrEMBL:Q77NU9" FT /protein_id="AAF04302.1" FT /translation="MKVNDNIHMNNGCYHVFVQDKDLHHLLFQVTNEIEVQSEEEEQTA FT IHIQTITYRARLVEIFQNFKNTVIIVLLEWKTHYPLLLTEITIKFLIQLMWIWLLTQVY FT QIVLAILPVLVMIQKLMVQVVNHQIKKQKQEEQVVRNYQEQQSLRVSRELEIDQLSILN FT DL" FT CDS complement(2338..2703) FT /codon_start=1 FT /product="unknown" FT /note="ORF3" FT /db_xref="UniProtKB/TrEMBL:Q9QCZ4" FT /protein_id="AAF04298.1" FT /translation="MLLLFYCSDKEALTYNPANGTVLLSKGSDFPLCPLISSPAAQLYS FT EANGLSVYVLYPTTHSQVTSKYDLVSVNDELVSPPVIAAVVKAGTGLIPICNEGCICGV FT ILPPIPRTIHCDFSISV" FT CDS complement(2719..4335) FT /codon_start=1 FT /product="nonstructural protein" FT /note="ORF2" FT /db_xref="GOA:Q77NU8" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q77NU8" FT /protein_id="AAF04297.1" FT /translation="MQDGKQPDNSNYVPALDDTMGTVWQRMRDDAGFLDETARDGFGGF FT FSRGVENSVSSDGEILGPQQQLQRDIVSRIKRTPFGPFRRYLSDVLACDDSREANRIAR FT QVIRTARDYPGNLCLISTHDDHVHVVHDCAYSDGSCRCKILKEETVKAKRRGAIRKRKA FT ISSIASDQWDDIILYFISNGRWLQFAKVGGSVVGLPYGYQALQERGHQGQDSGQILGTC FT TSTGSSELCGESSIEEVTGKSARINSRDGRRRRRRASDIREEMEKIVNENPVCPLAGII FT STRQWLTHKDLRYLRADNETVKSFLDAKSEEMCYWTLHDFNTFYSQPYCNPTFMAGYQP FT LEDKYYSVNDSLTILNKLLAYQFDDDVVQIKSFLNTFYNVLERKLPKCNTICVWSPPSA FT GKNFFFDVYLHYLMNYGQLGIMNKTNNFSLQEATSKRVLLWNEPNYEDAYTDTLKMLTG FT GDALCVRVKQKKDCHVYKTPLIVLTNNMIGFMHELAFVDRVKVYRWKQAPFLAEYNKKP FT NPLVAFEILVYWEIIPRIIEQ" FT CDS complement(3531..4328) FT /codon_start=1 FT /product="unknown" FT /note="ORF4" FT /db_xref="UniProtKB/TrEMBL:Q77NU7" FT /protein_id="AAF04299.1" FT /translation="MESSQTTVTMSQLWMTLWERYGNECVTMPGFWMRLLETDLEDSSQ FT EEWKTAFLPMVRYWARSNNFNVTSYQELKERLSDLFAGTLATSWPATTQEKLIESLDKL FT LEQLEITQEICALYQPTTIMSTSSMTARIPMAAVDAKSSKKRQLKLSVAERLENVKRLA FT QSHQISGTISSSISFPTDGGFSSLKWEGPWSDYRMDIKLYRSEDIKDKTPDKYWEHALL FT RAQVNYAENHPLKKLLEKVQELIVEMAEGEDDVQVTSAKKWRK" FT CDS complement(4304..5131) FT /codon_start=1 FT /product="unknown" FT /note="ORF1" FT /db_xref="UniProtKB/TrEMBL:Q77NU6" FT /protein_id="AAF04296.1" FT /translation="MQHNIKRMRTDQWNRMLHTYSRKDKVYNAPSLYDMCKLKTRETYR FT SNWGEVTCLPQTIQKDLLKDWLHCDEIMPLSSDEESQITDIIDLQSPYHITRNRPMTVE FT CFIALMNHPFEVPNFCDITCHIHHEYYIQTNMNTRIKSRLCKQCFFTISDYYKPYSANL FT WKLQGVYYTLYKNHTVVDAENVLQEIIWEPKNWCDHCIIEPLCYILDYSECRRKYNEEF FT KYYNTNLWESDSDDSDDNTDLCIVQTVNGNTVTDEVFKTLFDIDARWKAARQQ" XX SQ Sequence 5454 BP; 1633 A; 1028 C; 1051 G; 1742 T; 0 other; ttggccatag cttcgctata ccccaccaca accaccacca ccacgaccgg acacatggcc 60 tttggccgtg tccatggtgt ggtggtggtg gttgtggtgg ggtatagcga agctatggcc 120 aagcaccaag gggaaggggt aaccgaaggt ggtgggggaa gcgaggatat aaaagagcgc 180 gcgcagagcg ggagcgtcag tatgggatca gagctgagac cgttgatatc ggaggtacaa 240 caggaaaggt ttagtacaga tacaaataga atatataacg caggatatag tgaaatacgg 300 gaaccgaact ggggactccg gaatagaatt agtggatgga gtgaacgtgt gcgtgagcta 360 acaagaccaa ataattatag tgttattgaa ggaagtgata tagaattacc tataagtgtc 420 gacgacgatg tgcatattcc tattgaagaa gaaacaagtt ttagtgtaag tgttccagaa 480 gcaacagaaa ctacaggttt attaggtact agtgtcatta gtgctggaac gggtgttgct 540 ggaggagctg ctactggact tgctgctagt gatattggat tgggtgctgg tgctgtaatt 600 ggatctggaa tagttggtta cttaggccat aaaataatta gtggattaac atatcctttt 660 catcattatt taggacctgg aaatccatta gacaataatg agcctgtgga tagagatgat 720 gcaatagctg aagaacacga caaagcatat gcaaatgcca aatcatcaat agatgtaata 780 aacgcagata aaaaagcaat agatcatttt tctgaagatt ttgaaaaaaa tggtaattta 840 cattctttga ttggaaaaac tggattacaa attaaaacag ctattgaaca acggtttgga 900 gtaatctacc cttctgtttc aggtacgtaa tacacctcct tatgaacgtc ctaattggga 960 atcaatgaat gaaggtcaac gacaatattc atatgaacaa tggatgttat cacgtgttcg 1020 tgcaggacaa agatttacac cacctcctct ttcaggtgac gaacgagata gaagtccaat 1080 cagaggagga ggaacagaca gcgatacata tccagacgat tacataccgc gcacgcctgg 1140 tagagatatt ccagaacttc aagaacacag tgatcatagt attgttagag tggaagactc 1200 attaccctct acttctcaca gaaataacga tcaaattcct gattcaattg atgtggatat 1260 ggcttctcac tcaggtgtac cagatagtgt tggcaatcct gccggtactg gtaatgatcc 1320 agaaactaat ggtgcaggtg gtgaaccacc aaataaaaaa gcaaaaacag gaggagcaag 1380 tagtaagaaa ttaccaggaa cagcaaagcc tcagagtctc gagggaactg gagatcgatc 1440 aattgtctat cttgaacgac ctataaatcc taaaaatatt gtcataacta cttataagaa 1500 acaacacaaa ttgttgacat ttggaattgc ttctaaaata ttgaatcaaa aaattgctgc 1560 tgtagacaat gttaatccag ctcatgttat atattttctt actactgctt tagctgaagt 1620 tcctgttcat aagccagtgt tgtatatgaa tcaatctgaa tatgatttat tacctgttgg 1680 tgctgaagta ttgcaagtaa aagtgtctgt tgttcaaaga aatgcattat tatcatttca 1740 gacaaatgct tcatctacat cattggctac tttgaatcaa aataagaatg gagtatattg 1800 tattggtttg aataaaacag gttatggtac taatcgtaga tatacagcat tcaatgcaac 1860 tgaaaagatg attcctgaaa aatgtggtcc acctgtatat gcagcagtgg ctgaagggta 1920 tgaaggaatg ttggaagatc tatatggtgt gaataataat gtagcatcat ttgtaacatc 1980 attaccaaag catcaggttg gaatgtatac aaccttaaag aattattttt gtatgacaca 2040 aactagtttg tatactggtg gttggccaaa tctacaatca aaagtagttg agtatgatgc 2100 tgctgctgta gtgggagaac ccatcttgac atatgtttat caacctaaaa ttgctccttt 2160 gaaacctgtt cagaaatatc tgccaacaca attaccatat agattttcct ctgaatatgt 2220 tcatggtact ttgcaatcag gatttgaagt aatgaccaag aataataccg atacaactaa 2280 ggatgtaagt tattcatctt ctaatccgag agcaaacata gatatgtcat ttgatatcta 2340 tactgatatt gagaaatcac aatgtatggt tcgtggtatt ggtggtaata tgactccaca 2400 aatacaacct tcattgcata ttggtattaa tcctgtgcct gccttgacca ctgctgcaat 2460 tactggtgga gatactaatt catcatttac tgataccaga tcatattttg atgttacttg 2520 tgaatgtgtt gtaggataca gaacatatac tgacagacca tttgcctcag aatataattg 2580 tgctgctgga gaggaaataa gaggacataa tgggaaatca ctaccttttg acagtaatac 2640 tgttccattt gctggattgt atgttaatgc ttccttgtca gagcaataaa acaacagtaa 2700 catgaatgaa tttatatttt attgttcaat tatccttgga attatttccc aatacaccaa 2760 tatttcaaaa gctacaagcg gattaggttt cttattatac tcagctagga atggagcttg 2820 tttccatcta tataccttca ctctatctac aaatgctagt tcatgcatga atccaatcat 2880 attatttgta agtacaataa gtggtgtctt atatacatga caatcttttt tttgttttac 2940 tcttacacat agagcatcac cacctgttaa cattttcaaa gtgtctgtat atgcatcctc 3000 atagtttggt tcattccaca aaagcacacg tttagatgtt gcttcttgta aactgaaatt 3060 attagtctta ttcattatac ctaattgtcc atagttcatt agataatgta gatacacatc 3120 aaaaaagaag ttctttcctg cacttggagg agaccataca catattgtat tacactttgg 3180 taatttacgc tcaagcacat tataaaatgt atttaaaaat gatttaatct gaacaacgtc 3240 atcatcaaac tgatatgcta atagcttatt taaaattgtc aatgaatcat taacagaata 3300 gtatttatct tctaatggtt gataaccagc cataaatgtt ggattacaat atggttgtga 3360 ataaaaagta ttaaagtcat gcaaagtcca ataacacatt tcctcacttt tagcatcaag 3420 aaaggatttc acagtttcat tatctgcacg taagtatcgt aagtctttat gagttaacca 3480 ttgtcttgta gatataattc ctgctaatgg acacacggga ttttcattca ctattttctc 3540 catttcttcg cggatgtcac ttgcacgtcg tcttctcctt ctgccatctc tactattaat 3600 tcttgcactt tttccagtaa cttcttcaat ggatgattct ccgcataatt cacttgagcc 3660 cgtagaagtg catgttccca atatttgtcc ggagtcttgt ccttgatgtc ctcgctcctg 3720 taaagcttga tatccatacg gtaatccgac cacggaccct cccactttag cgaactgaag 3780 ccaccgtccg ttggaaatga aatagaggat gatatcgtcc cactgatctg atgcgattga 3840 gctaatcgct ttacgttttc taatcgctcc gcgacgctta gctttaactg tctcttcttt 3900 gaggattttg catctacagc tgccatcgga atacgcgcag tcatggacga cgtggacatg 3960 atcgtcgtgg gttgatataa ggcacaaatt tcctgggtaa tctctagctg ttctaataac 4020 ttgtctagcg attctattag cttctcttga gtcgtcgcag gccaagacgt cgctaaggta 4080 ccggcgaaaa ggtccgaaag gcgttctttt aattcttgat acgatgtcac gttgaagttg 4140 ttgctgcggg cccaatatct caccatcgga agaaacgctg ttttccactc ctcttgagaa 4200 gaatcctcca aatccgtctc tagcagtctc atccaaaaac ccggcatcgt cacgcattcg 4260 ttgccatacc gttcccatag tgtcatccaa agctgggaca tagttactgt tgtctggctg 4320 ctttccatct tgcatctata tcaaataaag ttttaaacac ttcatcagta actgtattcc 4380 catttactgt ttgtacaata cataaatctg tattatcatc agaatcatca gaatctgatt 4440 cccatagatt ggtattatag tatttaaatt cttcattata tttgcgtctg cattctgaat 4500 aatccaatat ataacataat ggttcgataa tgcaatgatc acaccaattt ttaggttccc 4560 atattatttc ttgtaataca ttttctgcat caacaactgt atgattttta tataatgtat 4620 aatatactcc ttgtagtttc catagatttg ctgaatatgg tttataataa tcagaaatgg 4680 taaagaaaca ttgtttacac aatcgtgatt ttatgcgtgt attcatgttt gtttgaatat 4740 agtattcgtg atggatatgg catgttatgt cacagaaatt tggtacttca aatggatgat 4800 tcatgagtgc tataaaacat tctacagtca ttggtctatt tcttgttata tgatatggtg 4860 attgtagatc tattatgtct gttatttgag attcttcatc actacttaat ggcattatct 4920 cgtcacaatg taaccaatct tttaagagat ctttttgaat tgtttgtggt aagcatgtta 4980 cttcacccca attacttcga tatgtttctc ttgttttcaa tttacacata tcatataaac 5040 taggtgcatt atatacttta tcttttctgg aatatgtatg caacatgcga ttccattgat 5100 ctgttcgcat acgttttata ttatgttgca tgcttaccag ctttgtacac ccctgatgct 5160 tttgatgatc ctttgtacac ccctgatgct ctcgatgatg tcttgtacac ccctggtgtt 5220 ggttgatgtg cacttgttga tgttattctg tcgactgacg ctcccgctct gcgcgcgctc 5280 ttttatatcc tcgcttcccc caccaccttc ggttacccct tccccttggt gcttggccat 5340 agcttcgcta taccccacca caaccaccac caccacgacc ggacacatgg cctttggccg 5400 tgtccatggt gtggtggtgg tggttgtggt ggggtatagc gaagctatgg ccaa 5454 //