ID AF188481; SV 1; linear; genomic DNA; STD; VRL; 2761 BP. XX AC AF188481; XX DT 02-NOV-1999 (Rel. 61, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Tomato leaf curl Bangladesh virus complete genome. XX KW . XX OS Tomato leaf curl Bangladesh virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2761 RA Shih S.L., Tsai W.S., Nakhla M.K., Maxwell D.P., Rashid M.H., Green S.K.; RT "Molecular comparison of two tomato leaf curl viruses from Bangladesh"; RL Zhi Wu Bao Hu Xue Hui Hui Kan 40:436-437(1998). XX RN [2] RP 1-2761 RA Tsai W.S., Nakhla M.K., Maxwell D.P., Rashid M.H., Green S.K.; RT ; RL Submitted (20-SEP-1999) to the INSDC. RL Plant Pathology-Virology, Asian Vegetable Research and Development Center, RL P.O. Box 42, Shanhua, Tainan, Taiwan, Republic of China XX DR MD5; 6a549874a3a8f183956c42a00ef89475. DR EuropePMC; PMC2170441; 17963488. DR EuropePMC; PMC3305473; 22339942. XX FH Key Location/Qualifiers FH FT source 1..2761 FT /organism="Tomato leaf curl Bangladesh virus" FT /strain="TLCV-BD2" FT /mol_type="genomic DNA" FT /country="Bangladesh" FT /db_xref="taxon:223344" FT CDS 146..502 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:Q9QDE8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q9QDE8" FT /protein_id="AAF04835.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGQQAHEQ FT EAQDVQDVQKSRCP" FT CDS 306..1076 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q9QDE7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q9QDE7" FT /protein_id="AAF04836.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1073..1477) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:Q9QDE6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q9QDE6" FT /protein_id="AAF04837.1" FT /translation="MDSRTGEPITAAQAVNGVFTWEIQNPLYFKITEHHNRPFLTNRDI FT IIIQLQFNHNLRKALGIHKCFLVYRIWMTSQPQTGRFLRVFKTQVFKYLDNLGVISINN FT VIRAVDHVLWDVLEHIVYVDQSYSIKFNIY" FT CDS complement(1218..1622) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:Q9QDE5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q9QDE5" FT /protein_id="AAF04838.1" FT /translation="MRSSSPSKAHSTQVPIKVQHKIAKKGTRRRRVDLPCGCSYFIALA FT CHDHGFTHRGTHHCSSSSEWRVYLGDSKSTLFQDNRAPQQAIPDKQRHHHHPTSVQSQP FT EESVGDTQMFPSLPNLDDFTASDWSFLKSL" FT CDS complement(1525..2610) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /note="rep protein" FT /db_xref="GOA:Q9QDE4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9QDE4" FT /protein_id="AAF04839.1" FT /translation="MPQPKRFQIYAKNYFLTYPQCSLTKEEALSQIKNLATPTNKLFIR FT VSRELHENGEPHLHVLIQFEGKFKCQNNRFFDLVSTTRSANFHPNIQGAKSASDVKAYV FT EKDGDFIDFGVFQIDGRSARGGCQSANDAYAEAINSGSKAAALNILREKAPKDFVLQFH FT NLNANLDRIFTPPVEVYVSPFNSSSFDQVPEELEEWAAENVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNEAWFNIIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNAALKNWALKNAIFVTLEGAL FT YSGSNQSAAQDSQEGDQASSC" FT CDS complement(2160..2453) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q9QDE3" FT /protein_id="AAF04840.1" FT /translation="MGNLIFTCSSSSKENSSVRTTDSSTWFPQPGQQISIRTFRELRAR FT QMSKPMWRKTETSLILEFSRSMADQLEEVANLPTTHMPRQSIQGPRLRPSIF" XX SQ Sequence 2761 BP; 763 A; 565 C; 619 G; 814 T; 0 other; accggatggc cgcgattttt tttaacgtgg gcccaacaac aagtgtgatg acaaagacct 60 gttgaccaat gaaaattgtc cctcaaagct taattgtgtc ctggtcccct ctataaactt 120 ggtccccaag ttcccacatt acaaaatgtg ggatccttta gtaaacgagt ttcccgaaac 180 cgttcacggt tttagatgta tgttagcagt taaatatctt cagttagtag aaaagactta 240 ttctcccgac acattagggt acgatttaat tagggattta atttcagtca ttagggctag 300 aaattatgtc gaagcgacca gcagatataa tcatttccac gcccgcttcg aaggtacgcc 360 gccgtctcaa cttcgacagc ccatatgcga gccgtgctgc tgcccccatt gtccgcgtca 420 ccaaagcaag agcatgggcc aacaggccca tgaacaggaa gcccaggatg tacaggatgt 480 acagaagtcc agatgtccct agaggctgtg aaggcccatg taaggtgcag tcctttgagt 540 ctagacatga cattcagcat ataggtaaag tcatgtgtgt cagtgatgtt actcgtggga 600 ctgggctgac ccatcgagtg ggtaaaaggt tttgtgttaa gtctgtgtat gttttgggta 660 agatatggat ggacgaaaat attaagacca agaatcacac caatagtgtg atgttttttc 720 ttgttaggga tcgtaggcct gttgataaac cccaagactt tggagaagtg tttaacatgt 780 ttgataatga gcccagtacg gctactgtga agaatgtgca tcgtgacagg tatcaagtgc 840 ttcggaaatg gcatgcaact gttactggtg gacagtatgc gtctaaggaa caagctctcg 900 tgaagaagtt tgttagggtt aataattatg ttgtgtataa ccagcaagaa gctggcaagt 960 atgagaatca ttctgagaat gcgttaatgt tgtatatggc atgtacacat gcctctaacc 1020 cagtgtatgc tactttgaag atacggatct atttctatga ttccgtaaca aattaataaa 1080 tattgaattt tattgaataa gattggtcta catatacaat atgttctaat acatcccata 1140 atacatgatc aactgcacga attacattat taatactgat aactcctaaa ttatctaaat 1200 atttaaacac ttgagtctta aagactctta agaaacgacc agtctgaggc tgtgaagtca 1260 tccagattcg gtagactagg aaacatttgt gtatccccaa cgctttcctc aggttgtgat 1320 tgaactgaag ttggatgatg atgatgtctc tgtttgtcag gaatggcctg ttgtggtgct 1380 ctgttatctt gaaatagagt ggattttgaa tctcccaggt aaacacgcca ttcactgctt 1440 gagctgcagt gatgggttcc ccggtgcgtg aatccatgat cgtggcaggc tagtgctata 1500 aagtatgaac atccacaagg gagatcaaca cgacgacgcc tggtcccctt cttggctatc 1560 ttgtgctgca ctttgattgg aacctgagta gagtgcgcct tcgagggtga cgaagatcgc 1620 attctttaaa gcccaattct tgagtgcagc attcttctct tcatccaaga actctttata 1680 acttgaattg ggtcctggat tgcagaggaa gatagtggga attccgcctt taatttgaac 1740 tggctttccg tattttgtat ttgattgcca gtccctttgg gcccccatga attccttaaa 1800 gtgctttagg tagtggggat cgacgtcatc tatgatgttg aaccaggcct cattattgta 1860 cacctttggg ctaaggtcta gatgaccaca caaatagtta tgcggtccca gtgatctggc 1920 ccacatcgtc ttccccgttc gactatcacc ctctatcact atacttatgg gtcttaaagg 1980 ccgcgcagcg gcactgacaa cgttctcggc agcccattct tcaagttcct ccggaacttg 2040 atcaaaagaa gatgaattaa aaggagaaac ataaacctcc accggaggtg taaaaatcct 2100 atctaaatta gcatttaaat tatgaaactg taatacaaaa tctttgggag ccttctccct 2160 taaaatattg agggccgcag ccttggaccc tgaattgatt gcctcggcat atgcgtcgtt 2220 ggcagattgg caacctcctc tagctgatct gccatcgatc tggaaaactc caaaatcaat 2280 gaagtctccg tctttctcca cataggcttt gacatctgac gcgctcttag ctccctgaat 2340 gttcggatgg aaatttgctg acctggttgt ggaaaccagg tcgaagaatc tgttgttctg 2400 acacttgaat tttccttcga actggatgag cacgtgaaga tgaggttccc cattttcgtg 2460 cagttcccgt gaaacgcgaa tgaataattt attagtaggt gtggcgaggt tttttatttg 2520 ggaaagtgcc tcttctttag taagagaaca ttgtggatat gttaagaaat aatttttagc 2580 atatatttgg aaacgtttcg gttgaggcat gttgacttgg tcaatcggta ctcaccaaac 2640 ttgtctatgc aatcggtgaa tggtactcaa tatataggtg agtaccgaat ggcacaactg 2700 taattactga atgtaattca aaattcaaat tccgacaaaa gcggccatcc gcactaatat 2760 t 2761 //