ID   AF185963; SV 1; linear; genomic RNA; STD; VRL; 1678 BP.
XX
AC   AF185963;
XX
DT   06-OCT-1999 (Rel. 61, Created)
DT   06-OCT-1999 (Rel. 61, Last updated, Version 1)
XX
DE   Turnip mosaic virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1678
RA   Gibbs A., Mackenzie A., Nightingale M., Wilson C., Blanchfield A.,
RA   Kitajima E., Clements M.;
RT   "Viruses of orchids: identification, biology and control";
RL   Unpublished.
XX
RN   [2]
RP   1-1678
RA   Mackenzie A.M., Gibbs A.J.;
RT   ;
RL   Submitted (13-SEP-1999) to the INSDC.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra, ACT 2601, Australia
XX
DR   MD5; a099c16b9d4b84560e97266075a81203.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1678
FT                   /organism="Turnip mosaic virus"
FT                   /host="Orchis militaris"
FT                   /strain="OM"
FT                   /mol_type="genomic RNA"
FT                   /country="Germany"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..1479
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="NIb polymerase/coat protein"
FT                   /db_xref="GOA:Q9PYA9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q9PYA9"
FT                   /protein_id="AAF00525.1"
FT                   /translation="QPSTVVDNTLMVILAVNYSLNKSGVPKDLRDNMIKFFVNGDDLLL
FT                   SVHPEYEFVLDTMAGNFQELGLKYTFDSRTRKKSDLWFMSHQGHKREGIWIPKLEPERI
FT                   VSILEWDRSKEPCHRLEAICAAMIESWGYDKLTHEIRKFYAWVLEQAPFSTLAQEGKAP
FT                   YIAETALRKLYLDKEPAQEELTRYLEAILEGYDDCTEVYVYHQANETLDAGATEEQKQA
FT                   ERERKEKERAEKERQKQLALKRGKDVAQEGTERDKEVNAGTSGTFSVPRLKSLASKMRV
FT                   PRFGKSVALNLDHLILYTPEQTDISNTRSTKRQFDTWFEGVMADYELTEDKMQIVLNGL
FT                   MVWCIENGTSPNINGMWVMMDGEEQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKR
FT                   NQDRPYMPRYGLQRNLTDMSLARYAFDFYEMTSRTPTRAREAHIPMKAAALRGANNNLF
FT                   GLDGNVGTTVENTERHTADDVNRNMHNLLGVKGL"
FT   3'UTR           1480..>1678
XX
SQ   Sequence 1678 BP; 542 A; 328 C; 414 G; 394 T; 0 other;
     cagccttcaa cagtggtgga caacacactc atggttattt tagcagtcaa ctactcactc        60
     aacaaaagtg gagttccaaa agacttgcgc gataatatga tcaaattctt cgtaaacggt       120
     gatgatctac tactaagcgt gcacccagag tatgagttcg tccttgatac aatggctgga       180
     aactttcaag aactgggact taaatacaca ttcgattcta gaactcgaaa gaaaagtgat       240
     ctgtggttta tgtcacatca aggacacaag agagagggta tttggattcc aaaattagaa       300
     ccagaacgca ttgtctcgat tctcgaatgg gatcgttcga aggaaccctg ccaccgattg       360
     gaagcaatct gtgcagccat gatagaatcg tggggttatg ataaactgac gcatgagatt       420
     aggaaattct atgcatgggt actagaacaa gctccattca gtactttggc acaggaggga       480
     aaagctccat acattgcaga aaccgcgctt cgcaagttgt atctagataa agaaccagcc       540
     caagaggaac tcactcgata tcttgaagca attcttgaag gctacgacga ctgcactgag       600
     gtgtatgtct atcatcaagc caatgaaaca ttggacgcag gtgcgacgga agaacaaaaa       660
     caagcagaga gggaaagaaa agagaaggag cgagcggaga aagagaggca aaagcagttg       720
     gcacttaaaa gaggaaagga cgtagcacag gaaggaacag agcgcgacaa ggaagtgaat       780
     gctggtacat ccggaacctt cagcgtaccc agactcaaaa gcttagcgag taagatgcgc       840
     gtacccagat tcggtaagag cgtggcgctt aacttagacc atttgatttt gtacactcca       900
     gaacaaacag acatctcgaa tacaagatca acaaaacgac aatttgacac atggttcgag       960
     ggcgttatgg ctgattatga gctaacggaa gacaaaatgc agatagttct caatggttta      1020
     atggtctggt gcattgagaa cgggacatct ccaaatataa acggaatgtg ggtgatgatg      1080
     gacggagaag agcaagtaga atttccgatc aaaccactca tcgatcacgc caaacccaca      1140
     tttaggcaga taatggccca tttcagtgac gtagctgaag cgtacattga aaagcgtaac      1200
     caagaccgac catacatgcc acgatatggt cttcagcgca atttaacaga catgagcttg      1260
     gctcgttacg cgtttgattt ctatgaaatg acttctagga ctccaacgag agcgagagag      1320
     gcacacatcc caatgaaggc agcagcactg cgtggcgcaa ataataattt gttcggactg      1380
     gatggaaatg tcggcacaac ggtagagaac acggaaagac acacggccga tgatgtaaat      1440
     cggaacatgc acaacctcct tggcgttaag gggctgtgaa gttgtgtgtt ggtagtttat      1500
     aagtatatta aagctactcg ttagtattct cgctatggga aatatgtaag tttgttaaag      1560
     cagccagagt gatgtgatca tgcgtgttgt tgttacttat cttatttcgt cgaattctct      1620
     attggtgtta gtacgtgtag tgagattaca tctcgatcgt cttaacattt gatagggg        1678
//