ID   AF185959; SV 1; linear; genomic RNA; STD; VRL; 1618 BP.
XX
AC   AF185959;
XX
DT   06-OCT-1999 (Rel. 61, Created)
DT   06-OCT-1999 (Rel. 61, Last updated, Version 1)
XX
DE   Clover yellow vein virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Clover yellow vein virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1618
RA   Gibbs A., Mackenzie A., Nightingale M., Wilson C., Blanchfield A.,
RA   Kitajima E., Clements M.;
RT   "Viruses of orchids: identification, biology and control";
RL   Unpublished.
XX
RN   [2]
RP   1-1618
RA   Mackenzie A.M., Gibbs A.J.;
RT   ;
RL   Submitted (13-SEP-1999) to the INSDC.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra, ACT 2601, Australia
XX
DR   MD5; ea5f1e47be5816432f377a9bfac0d9ff.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1618
FT                   /organism="Clover yellow vein virus"
FT                   /host="Orchis majalis"
FT                   /strain="OM"
FT                   /mol_type="genomic RNA"
FT                   /country="Germany"
FT                   /db_xref="taxon:12198"
FT   CDS             <1..1452
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="NIb polymerase/coat protein"
FT                   /db_xref="GOA:Q9QDL3"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QDL3"
FT                   /protein_id="AAF00521.1"
FT                   /translation="GNNSGQPSTVVDNTLMVIMAMYYAAEKLGVEGDLSESIVFYANGD
FT                   DLLIAVHPSHEWYLDQLSTLFKELGLNYDFSSRTKNKGDLWFMSHCGIKKEGLWIPKLE
FT                   PERVVSILEWDRAAEPEHRLEAICASMIEAWGYDDLLNHIRRFYLWVLDQAPYKQLSAE
FT                   GKAPYISEVALKSLYTGKPATSCELEVYNKIHQEQHDEFGDGQMKFVFQSDKEKLNACE
FT                   QQKSKDRESRQRDQEGENSNRQIIPDRDINAGTTGTFSVPKLKKISGKLSLPKIKGKGL
FT                   LNLDHLLVYVPNQDDISYNIATQEQLEAWHEGVKNAYEVDDQQMEIICNCLMVWCIENG
FT                   TSGDLQGEWPMMDGEKQVTFPLKPILVFAKPTLRQIMAHFSQAAESYIEFRNSTERYMP
FT                   RYGLQRNLTDYGLARYAFDFYRLTSKTPARAREAHMQMKAAAIRGKSNHMFGLDGNVGT
FT                   DEENTERHTANDVNRNMHHIAGARF"
FT   3'UTR           1453..>1618
XX
SQ   Sequence 1618 BP; 528 A; 299 C; 383 G; 408 T; 0 other;
     gggaacaaca gcgggcagcc ctcgacagtt gtcgataaca cactaatggt gataatggct        60
     atgtactatg cagcagaaaa acttggtgtg gaaggagatt taagcgagtc cattgtgttc       120
     tacgccaatg gtgatgattt gttgatagca gtgcacccaa gtcatgagtg gtatctagac       180
     caactttcta cacttttcaa agagttgggc ttgaactatg atttctcaag caggacaaag       240
     aataaaggtg atctctggtt catgtcacac tgtggtataa agaaagaagg tttgtggatt       300
     cccaagttgg agccagaaag agtggtctca atccttgaat gggatagagc ggcagagcct       360
     gaacataggt tggaagctat ttgtgcatcc atgatcgaag cttggggtta tgatgacttg       420
     ctcaatcaca tacgcaggtt ttatttatgg gttcttgacc aagcaccata caaacagctc       480
     agcgcagaag gaaaagcacc ctatatctca gaagttgcgt tgaagagttt gtacactggg       540
     aaaccagcta caagttgtga actagaagtg tacaataaga tccatcaaga gcaacacgat       600
     gagtttggtg acggccagat gaaatttgtt ttccaatccg acaaagagaa gttgaatgct       660
     tgtgagcaac aaaagtcaaa ggatagggaa tcaagacaaa gagatcaaga gggtgaaaac       720
     tcaaacagac aaatcattcc agacagagac atcaatgcag gaaccactgg gactttttca       780
     gtacccaaat tgaagaaaat atcaggaaag ctctcattgc ccaaaatcaa aggaaaagga       840
     ttgctgaact tggaccactt gctagtttat gttccaaacc aggacgacat ctcttacaac       900
     atagcaactc aagagcagct agaagcgtgg catgaggggg tcaagaatgc gtatgaagtg       960
     gatgatcagc aaatggaaat catatgtaat tgtttgatgg tgtggtgcat agagaatggt      1020
     acatcaggcg atcttcaagg tgagtggcca atgatggatg gagagaaaca ggtaacattt      1080
     ccactcaagc caattcttgt ctttgccaaa ccaacattga ggcaaattat ggcccatttt      1140
     tctcaggcag ccgaatcata catagagttc aggaattcaa cagagagata catgcctagg      1200
     tatgggctgc aaagaaatct cacagactat ggtttagcca gatatgcatt tgacttctac      1260
     aggttgactt caaagacacc agcaagagct cgagaggcac atatgcaaat gaaggcagca      1320
     gcaataagag ggaagtcaaa tcacatgttt ggactggatg gcaatgttgg aacagacgag      1380
     gagaacacag agaggcacac agcaaatgat gttaacagga acatgcatca cattgctgga      1440
     gcacgattct agagtatccg tctttaaatt ctccatttat ttcgaagttt tactattata      1500
     gcactatgtt aagtgaggtt tcacctccat ttcattttaa gtataatatg taatccattc      1560
     tctctattct gacagagtaa ctaagtgagg tcacacctcg ttgtgaatgt gtcttttt        1618
//