ID   AF185957; SV 1; linear; genomic RNA; STD; VRL; 1685 BP.
XX
AC   AF185957;
XX
DT   06-OCT-1999 (Rel. 61, Created)
DT   07-AUG-2000 (Rel. 64, Last updated, Version 3)
XX
DE   Sarcochilus virus Y polyprotein gene, partial cds.
XX
KW   .
XX
OS   Sarcochilus virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1685
RA   Gibbs A., Mackenzie A., Blanchfield A., Cross P., Wilson C., Kitajima E.,
RA   Nightingale M., Clements M.;
RT   "Viruses of orchids in Australia: their identification, biology and
RT   control";
RL   Aust. Orchid Rev. 65(3):10-21(2000).
XX
RN   [2]
RP   1-1685
RA   Mackenzie A.M., Gibbs A.J.;
RT   ;
RL   Submitted (13-SEP-1999) to the INSDC.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra, ACT 2601, Australia
XX
DR   MD5; 3a1850c78c98d624b0a517d8d8bb32c3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1685
FT                   /organism="Sarcochilus virus Y"
FT                   /host="Sarcochilus hartmanii"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /note="acronym: SarVY"
FT                   /db_xref="taxon:104393"
FT   CDS             <1..1440
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="NIb polymerase/coat protein"
FT                   /db_xref="GOA:Q9QDL5"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QDL5"
FT                   /protein_id="AAF00519.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVVAVYYSCLKSGWICSELKDKLIFFANG
FT                   DDIILAVEPHSVNILDTFKESFWELGLSYDFSERTREREQLWFMSHQAKLINDVYIPKL
FT                   EQERIVSILEWDRSKELMHRTEAICAAMIEAWGHNELLQEIRKFYLWLLQKPEFKALSV
FT                   AGKTPYIAETALRKLYIDEEATTDELMRYLEVFTYGDDEEDQVRMQAGETPTVIDAGQE
FT                   GKPKEKGVASGSGTVMTQPEARDKDVDVGSRGQVPRLQKITKKMKMPMVKGNVILNLNH
FT                   LLEYKPDQTDLFNTRATRSQFETWFETVKSEYGLNDSQMGIVMNGFMVWCIDNGTSPDI
FT                   SGMWVMMDGEDQVEYPLKPMVENAKPTLRQIMHHFSDAAEAYIELRNSERPYMPRYGLV
FT                   RNLRDMSLARYAFDFFEVNSKTPARAREAVAQMKAAALSNVTSKMFGLDGNVGQMSEDT
FT                   ERHTARDVNQNMHTLLGMKSL"
FT   3'UTR           1441..1685
XX
SQ   Sequence 1685 BP; 534 A; 285 C; 398 G; 468 T; 0 other;
     gggaacaaca gtgggcaacc ctctacagtt gttgataaca cacttatggt tgttgttgct        60
     gtttattatt cctgtttgaa atctggctgg atctgtagcg aacttaaaga taagcttata       120
     ttcttcgcaa atggggatga tataatacta gcagttgaac ctcatagtgt taacattctt       180
     gacacattca aggaatcttt ttgggaactt ggattgagtt atgacttctc tgagagaaca       240
     agggagcgag agcagttatg gtttatgtca catcaagcaa agcttataaa tgatgtgtat       300
     atccccaagt tagagcaaga gcgtattgta tcgattctgg aatgggatag gagcaaagaa       360
     ttaatgcacc gtactgaggc aatttgtgct gcaatgatag aagcttgggg acataatgag       420
     cttttgcagg aaattcggaa attctatttg tggttattac aaaaaccgga attcaaagct       480
     ttatcagtgg ctggcaagac accatatata gcggaaactg ctcttagaaa actatatata       540
     gacgaggagg cgactactga tgagttgatg agatatcttg aagtgttcac atatggagat       600
     gatgaggaag accaagtgcg tatgcaagca ggggaaacac caacagttat tgacgcaggt       660
     caggagggaa aacctaaaga aaaaggtgtg gcaagtggtt ctgggacagt aatgacacaa       720
     ccagaagctc gcgataaaga cgtcgatgtt ggttcgcgag gccaagttcc acgtttacaa       780
     aagattacaa agaaaatgaa aatgccaatg gttaaaggaa atgtcatact caatctcaat       840
     catcttctag agtataaacc tgatcaaact gatctattca atactagagc aacaaggtca       900
     caatttgaaa cttggttcga aacagttaaa tctgagtatg gattgaatga ttctcaaatg       960
     ggaatagtta tgaatggttt catggtatgg tgcattgaca atggaacttc accagacatt      1020
     agtggtatgt gggtaatgat ggatggcgaa gatcaagttg aatacccact aaaaccaatg      1080
     gtagaaaatg ctaagccaac gctacgacaa atcatgcatc acttttcaga cgcagcggag      1140
     gcttacatag agcttcggaa ttctgaacgt ccgtacatgc ctaggtacgg attggtaaga      1200
     aatcttagag acatgagttt ggctcgctat gcttttgact tctttgaagt taattcaaaa      1260
     acgccagcac gagctcgtga agcagtcgca caaatgaagg ctgctgccct ttctaacgtt      1320
     acaagcaaaa tgttcggatt agatggtaac gttggacaaa tgagtgagga cacagaaagg      1380
     catactgcac gtgatgttaa ccaaaatatg cacactttac ttggtatgaa atcactgtag      1440
     ggaagattag gtaaactagt cactgttatc gcctcgccgt caagctttta tcgggtcaca      1500
     atatatagta tcttatgtct gtagtgtggt ttgaccacct gtgcgtttgg tgtatttaac      1560
     accttttata ctatatttgg atgtgtatta gctggattca ccactttcaa tggagagcct      1620
     ccagtgatgc ttggcatcgt gtgttgtaat ctgcggaaag tgtttgtgcg tccaagaaaa      1680
     aaaaa                                                                  1685
//