ID   AF185956; SV 1; linear; genomic RNA; STD; VRL; 1622 BP.
XX
AC   AF185956;
XX
DT   06-OCT-1999 (Rel. 61, Created)
DT   07-AUG-2000 (Rel. 64, Last updated, Version 3)
XX
DE   Rhopalanthe virus Y polyprotein gene, partial cds.
XX
KW   .
XX
OS   Rhopalanthe virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1622
RA   Gibbs A., Mackenzie A., Blanchfield A., Cross P., Wilson C., Kitajima E.,
RA   Nightingale M., Clements M.;
RT   "Viruses of orchids in Australia: their identification, biology and
RT   control";
RL   Aust. Orchid Rev. 65(3):10-21(2000).
XX
RN   [2]
RP   1-1622
RA   Mackenzie A.M., Gibbs A.J.;
RT   ;
RL   Submitted (13-SEP-1999) to the INSDC.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra, ACT 2601, Australia
XX
DR   MD5; db7335a61b904d0703b7ae08d07b8d4e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1622
FT                   /organism="Rhopalanthe virus Y"
FT                   /host="Dendrobium philippinense"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /note="acronym: RhoVY"
FT                   /db_xref="taxon:104392"
FT   CDS             <1..1443
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="NIb polymerase/coat protein"
FT                   /db_xref="GOA:Q9QDL6"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QDL6"
FT                   /protein_id="AAF00518.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVVAMYYALSKEINDLDDLTEFIVFFVNG
FT                   DDLVIAIAPDKVNLLDDFGDSFRELGLTYDFSERSLDKSDIEFMSHKGILIDGTYIPKL
FT                   EKERIVSILEWDRSNDITHRAEAICAAMIEAWGYNDLLTEIRKFYNWLMDLEEFRDETA
FT                   RGVFPYIAETALRKLYTNADSSVNELLAYLEIIHEEDTGEFDIVVLQGDRAEMDAGADT
FT                   VRRRNQPSEEPSASTGIVSGERDRDIDTGSRGQVVPRLKTIGKKMRMPKKVNEIVLNLE
FT                   HLLEYKPDQVDLSNTRATHKQFEMWHNTVMKELEITEEQMKIILNGFMVWCIENGTSPN
FT                   LNGVWTMMDGVEQVEFPLKPFIENAKPTLRQIMHHFSDAAEAYIEFRNAESVYIPRYAL
FT                   IRNLRDPNLARYAFDFYEMHAKTPVRAREAHLQMKAAALTNVNTRLFGLDGNIATQEEN
FT                   TERHVATDVNANMHTLLGVRHM"
FT   3'UTR           1444..1622
XX
SQ   Sequence 1622 BP; 519 A; 251 C; 388 G; 464 T; 0 other;
     gggaacaaca gtgggcaacc atcaaccgtt gttgacaaca ctttaatggt ggttgtagct        60
     atgtattacg ctttgagcaa agaaatcaac gatcttgatg atttaactga attcatcgtc       120
     ttctttgtga atggtgacga tttagtcatt gccatagcgc ctgataaagt taatttgctt       180
     gatgatttcg gagattcgtt tcgagaattg ggcctaacat atgatttttc tgagaggagc       240
     ttggataaga gcgatattga gtttatgtct cataagggaa tccttataga tggcacatac       300
     attcccaaat tggagaagga gaggattgtt tcgattctcg agtgggatag aagtaatgat       360
     attacacata gagccgaagc aatttgtgca gcgatgattg aagcgtgggg atataatgat       420
     ttattaacgg agattagaaa attttataac tggttaatgg acctggaaga gtttagagat       480
     gaaaccgcga gaggtgtttt tccatatata gctgaaaccg ctcttcggaa attgtacaca       540
     aacgctgatt caagtgtcaa tgaattgtta gcgtatctgg aaatcattca tgaggaagac       600
     accggagaat ttgatattgt tgttttgcaa ggcgaccgag ctgagatgga tgcgggtgca       660
     gatactgtga gacggagaaa tcaaccaagt gaagaaccaa gtgctagcac tgggattgtg       720
     agtggagagc gagatagaga cattgacact gggagtaggg ggcaagtagt tcctagatta       780
     aagacgattg gaaagaaaat gcgtatgccc aagaaagtta atgaaattgt tctgaactta       840
     gaacatttat tggaatacaa accagatcaa gtggatctct cgaatactcg agcaacgcat       900
     aagcaatttg agatgtggca caatacagtc atgaaagaat tagagataac tgaagagcaa       960
     atgaagataa tcttgaatgg atttatggtt tggtgtattg agaatggcac atcaccaaac      1020
     ttgaatggtg tttggacgat gatggatggg gttgagcaag ttgagtttcc tttgaaacca      1080
     ttcattgaaa atgcgaaacc aacccttaga cagattatgc atcatttctc tgatgctgca      1140
     gaggcttata tagaattcag gaacgctgaa agtgtgtata tacctagata tgctttaatt      1200
     aggaatttgc gtgatcccaa tttagctaga tatgcgtttg atttctatga gatgcatgca      1260
     aaaactccag ttagagcacg tgaagctcat ctgcagatga aggcggctgc gttaactaat      1320
     gttaacacaa gattatttgg tcttgatggg aacatagcaa cgcaagaaga aaacacagaa      1380
     cggcacgtcg cgaccgacgt taatgcaaac atgcacaccc tcttgggtgt ccgccatatg      1440
     tagtttatat atttgtgtgt gttctgtggt acttattata atattatagt gtttcagtgt      1500
     gggttgccca ccttcctatc ctattataat aaacaaagga ctactaactt ggtttcttct      1560
     gagagtggtt agaccacgtg gaataaacct ttagtataca cctttaaaaa aaaaaaaaaa      1620
     aa                                                                     1622
//