ID   AF185955; SV 1; linear; genomic RNA; STD; VRL; 1642 BP.
XX
AC   AF185955;
XX
DT   06-OCT-1999 (Rel. 61, Created)
DT   06-OCT-1999 (Rel. 61, Last updated, Version 1)
XX
DE   Cypripedium virus Y isolate CF polyprotein gene, partial cds.
XX
KW   .
XX
OS   Cypripedium virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1642
RA   Gibbs A., Mackenzie A., Nightingale M., Wilson C., Blanchfield A.,
RA   Kitajima E., Clements M.;
RT   "Viruses of orchids: identification, biology and control";
RL   Unpublished.
XX
RN   [2]
RP   1-1642
RA   Mackenzie A.M., Gibbs A.J.;
RT   ;
RL   Submitted (13-SEP-1999) to the INSDC.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra, ACT 2601, Australia
XX
DR   MD5; 86fad6946c63e4acc1d97b759f4d966f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1642
FT                   /organism="Cypripedium virus Y"
FT                   /host="Cypripedium franchettii"
FT                   /isolate="CF"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom"
FT                   /note="acronym: CypVY"
FT                   /db_xref="taxon:104389"
FT   CDS             <1..1437
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="NIb polymerase/coat protein"
FT                   /db_xref="GOA:Q9QDL7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QDL7"
FT                   /protein_id="AAF00517.1"
FT                   /translation="GNNSGQPSTVVDNTLMVILAMHYTLLKCGIPSERHDDMCKYYANG
FT                   DDLIIAIHPDYKNLLNNFSGHFSTLGLKYNFDSRHTDKADLWFMSHKSILVDGLYIPKL
FT                   EPERIVSIIQWDRATFPEHRLEAICAAMIESWGYTQLTHEIRKFYKWVLEQAPYNELAR
FT                   EGRAPYVAETALRNLYTSRAPAPSELEIYYAAINEHTAQEQTDVVYHQSGPDKMDAGLA
FT                   RVEKAGDSSGNKQAITRQPDRDVNVGTSGGFNIPRTKAISSKLVLPKSKGKVVLNMNHL
FT                   LTYVPSQVDISNTRSTHQQFTTWYEGIKNDYDITDEGMSILMNGLMVWCIENGTSPNIN
FT                   GVWVMMDGEEQVEYPIKPLIDHARPTLCQIMAHFSNVAEAYIEKRNNEKAYMPRYGLQR
FT                   GLNDMSLGRYAFDFYEMTSNAPARAREAHMQMKAAALVNATTRLFGLDGNVNVKEEDPE
FT                   RHTVEDVNRHQHYLHGSRNF"
FT   3'UTR           1438..1642
XX
SQ   Sequence 1642 BP; 552 A; 332 C; 379 G; 379 T; 0 other;
     gggaacaata gcgggcagcc atcaacagtg gtagacaata cactgatggt tatactagct        60
     atgcactaca ctttactgaa atgcggaatt ccgtcggaac gacacgatga catgtgcaaa       120
     tactacgcca acggtgacga tctgatcatt gcaatccatc cagactataa aaacctgtta       180
     aacaacttct ctggtcattt cagcacacta gggttaaagt acaactttga ctcacgacac       240
     acagataaag cagacctttg gttcatgtct cacaagagca tcctagtgga tggattgtac       300
     ataccaaaac ttgagccgga gcgcatagta tctataattc agtgggatcg tgcaactttc       360
     cccgaacaca ggcttgaagc tatatgtgcg gctatgatag aatcgtgggg ttacacacaa       420
     ctcacacacg agattagaaa attttataag tgggtgcttg agcaagcccc atacaacgag       480
     ctagcaaggg aagggagagc gccatatgtt gctgagacag cattacgaaa cttatacact       540
     agtagagccc cagcccctag tgaactcgaa atctactacg cagctatcaa tgagcatacc       600
     gcacaagagc aaacagatgt tgtttaccac cagtcagggc ctgataaaat ggacgcaggt       660
     ctagcgaggg ttgagaaagc aggtgatagc tcaggaaaca agcaagcaat cacacgacaa       720
     ccagatagag acgtgaacgt aggaacgagt ggaggattca atatcccacg aaccaaggca       780
     atctcatcaa agctagtcct tccaaaaagc aaaggaaagg ttgtcctgaa catgaatcat       840
     ctcttaactt atgtaccgag tcaagtggac atctcgaata caaggtccac acatcaacaa       900
     ttcacaactt ggtatgaagg cattaagaat gattatgata ttacagatga aggcatgagc       960
     atattaatga atggactcat ggtgtggtgt atcgagaacg ggacatcacc aaatataaat      1020
     ggagtatggg taatgatgga tggtgaggaa caagtggagt atccaataaa gccactcatc      1080
     gatcatgcca gacccacact ttgccagata atggcccatt tcagtaacgt tgcggaggcg      1140
     tatattgaaa agagaaataa tgaaaaagca tacatgccac ggtatggact tcagcgagga      1200
     ttaaacgaca tgagcttagg ccgatacgca ttcgattttt atgaaatgac ttcgaacgca      1260
     ccagcgcgag cacgtgaagc ccacatgcaa atgaaagcag cagcattagt gaatgcaaca      1320
     acgcgtttat ttggattgga tggaaatgtc aatgtaaagg aagaagaccc ggagagacac      1380
     acagttgaag atgtgaatag acatcaacat tatttacatg gcagtagaaa tttttgagtg      1440
     ttgggacttt agttaatcgt tacataaact actatggacc cgttagtatt ttcacctacg      1500
     agggtgagca aatcactcgc agtgagatgt atctcgagag tgagagattc ccctttcgag      1560
     cttgcgattt ttgttgtgaa tgtaatgtga tgcgatcact atttccgaca tctggccgtt      1620
     agtgagagaa aaaaaaaaaa aa                                               1642
//