ID   AF173555; SV 1; circular; genomic DNA; STD; VRL; 2644 BP.
XX
AC   AF173555;
XX
DT   07-SEP-1999 (Rel. 61, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Bean golden yellow mosaic virus-[Mexico] DNA-A, complete sequence.
XX
KW   .
XX
OS   Bean golden yellow mosaic virus-[Mexico]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2644
RA   Garrido-Ramirez E.R., Gilbertson R.L.;
RT   "Molecular detection and characterization of bean golden mosaic geminivirus
RT   (BGMV) from Chiapas, Mexico";
RL   Phytopathology 86:S17-S17(1996).
XX
RN   [2]
RP   1-2644
RA   Garrido-Ramirez E.R., Gilbertson R.L.;
RT   ;
RL   Submitted (29-JUL-1999) to the INSDC.
RL   Plant Pathology, University of California, Davis, One Shields Avenue # 1,
RL   Davis, CA 95616, USA
XX
DR   MD5; ffc32794368e837aeb60ed9cad998121.
DR   EuropePMC; PMC3485178; 23082767.
DR   EuropePMC; PMC5408669; 28358318.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2644
FT                   /organism="Bean golden yellow mosaic virus-[Mexico]"
FT                   /segment="DNA-A"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Chiapas"
FT                   /note="type: II"
FT                   /db_xref="taxon:222447"
FT   gene            complement(join(1589..2644,1..6))
FT                   /gene="AC1"
FT   CDS             complement(join(1589..2644,1..6))
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="rep protein"
FT                   /note="DNA polymerase"
FT                   /db_xref="GOA:Q9QGH3"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QGH3"
FT                   /protein_id="AAD53082.1"
FT                   /translation="MPPPQRFRVQSKNYFLTYPRCSIPKEEALSQLQKIHTATNKKFIK
FT                   VCEERHENGEPHLHALIQFEGKFVCTNKRLFDLVSSTRSAHFHPNIQGAKSSSDVKAYI
FT                   DKGGVTIEWGQFQVDGRSARGGQQSANDSYAKALNADSIESALSVLKEEQPKDYVLQHH
FT                   NIRSNLERIFVKAPEPWVPPFPLSSFINVPVVMQEWVDDYFGRGSAARPERPISIIVEG
FT                   DSRTGKTMWARALGPHNYLSGHLDFNSRVYSNAVEYNVIDDISPNYLKLKHWKELIGAQ
FT                   KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLDKEENRALHNWTIHNAIFVTLT
FT                   APLYQSTAQDCQT"
FT   misc_feature    1..207
FT                   /note="common region of bipartite geminiviruses"
FT   gene            367..1122
FT                   /gene="AV1"
FT   CDS             367..1122
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9QGH6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QGH6"
FT                   /protein_id="AAD53081.1"
FT                   /translation="MPKRDAPWRQMAGTYKVSRSGNYSPGSGMGSKSNKANAWVNRPMY
FT                   RKPRIYRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRYQVMHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   gene            complement(1119..1517)
FT                   /gene="AC3"
FT   CDS             complement(1119..1517)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="AC3"
FT                   /db_xref="GOA:Q9QGH5"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QGH5"
FT                   /protein_id="AAD53084.1"
FT                   /translation="MDSRTGENITAHQVENSVFIWEVPNPLYFKIMRVEDPAYTRTRIY
FT                   HIQVRFNHNLRKALNLHKAFLNFQVWTTSIQASGTTYLNRFRHLVLLYLHRIGVIGINN
FT                   VIRAVQFATDKSYVNTVLENHEIKFKFY"
FT   gene            complement(1263..1782)
FT                   /gene="AC2"
FT   CDS             complement(1264..1782)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="Trap"
FT                   /note="transactivator for AV1 and BV1; DNA-binding protein"
FT                   /db_xref="GOA:Q9QGH4"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QGH4"
FT                   /protein_id="AAD53083.1"
FT                   /translation="MESRFKLKEEYHQSCCAIQVRVPVIKTSWTKKKTELYTTGLFIMR
FT                   SSSPSQPPSIKAQHRIAKRKAIRRRRIDLNCGCSIFYHIKCADHGFTHRGEHHCASGRE
FT                   FRFYLGGTKSPLFQDHAGGRSSIHKDKDIPHPSQVQSQPQESTESPQSIPELPSLDDID
FT                   SSFWDDIFK"
XX
SQ   Sequence 2644 BP; 714 A; 534 C; 585 G; 811 T; 0 other;
     tggcatattt gtaaatatgc gagtgtctcc aaatgagttt gcgagtgtct ccaattgagg        60
     ctcctcaaaa ctcgctcatg caattggaga ctggagtaca atatatacta gtaccctcaa       120
     tctcgtgaat tatcagattc acacacgtgg cggccatccg atataatatt accggatggc       180
     cgcccgcgcc cctttatttc cgtacacttc cacgtgtcgc tttaatttaa atttgccatg       240
     actctttttg actgaccaat gatattgtat ttgacgagcc tagatattcg taaacttggt       300
     gactaagtgt tacctttgct tataaattta aattaaattg atgcccattc cacgtgtaag       360
     tccagaatgc ctaagcgtga tgcgccatgg cgtcaaatgg cgggaaccta caaggtttcc       420
     cgttctggca attattcacc aggaagtgga atgggctcaa aatccaacaa ggccaatgca       480
     tgggtcaaca ggcccatgta tagaaagcct aggatatatc ggatgtacag aagcccagac       540
     gtgcccaagg gatgtgaagg accttgcaag gtccaatcat atgaacaacg ccatgatata       600
     tctcatgttg gtaaggttat gtgtatatcc gatatcacac gtgggaatgg tattacccac       660
     cgtgttggta aacgtttttg tgtgaagtct gtgtatattt tagggaagat atggatggat       720
     gaaaacatca agcttaagaa ccatactaat agtgttattt tttggttggt ccgtgaccgt       780
     agaccatatg gaacccctat ggattttgga caagttttta acatgtttga caatgaaccc       840
     agtactgcta cggtcaagaa cgatcttcgt gatcgttatc aagttatgca taggttcaat       900
     gcaaaggtga ctggtggtca atatgcaagc aacgaacaag ccttggtaag gcgattttgg       960
     aaggtgaaca accatgtcgt ctataaccac caggaagcag gaaaatatga gaatcatacg      1020
     gagaatgcat tattgttgta tatggcatgt acacatgcct ctaatcctgt atatgcgaca      1080
     ttgaaaattc ggatctattt ctatgattcg ataaccaatt aataaaattt aaattttatt      1140
     tcatgattct caagtacagt atttacatat gatttgtctg ttgcgaactg aacagctcga      1200
     atgacattgt ttattcctat tacgcctatt ctatgtaaat acaataaaac caaatgtcta      1260
     aatctattta aatatgtcgt cccagaagct tgaatcgatg tcgtccagac ttggaagttc      1320
     aggaatgctt tgtggagatt cagtgctttc ctgaggttgt gattgaacct gacttggatg      1380
     tggtatatcc ttgtccttgt gtatgctgga tcttccaccc gcatgatctt gaaataaagg      1440
     ggatttggta cctcccaaat aaaaacggaa ttctctacct gatgcgcagt gatgttctcc      1500
     cctgtgcgtg aatccatgat ctgcgcactt gatatggtaa aatatggaac agccgcagtt      1560
     caagtcaatg cgtcgtcgac gaatggcttt acgtttggca atcctgtgct gtgctttgat      1620
     agaggggggc tgtgagggtg acgaagatcg cattatgaat agtccagttg tgtaaagctc      1680
     ggttttcttc tttgtccagg aagtctttat aactggaacc ctcacctgga ttgcacagca      1740
     cgattgatgg tattcctcct ttaatttgaa ccggctttcc atatttacag tttgattgcc      1800
     agtccttttg tgccccaatt agttctttcc aatgctttaa cttcaaataa ttggggctta      1860
     tgtcatcaat gacgttgtat tccactgcgt tggaatagac acgtgaatta aagtccaagt      1920
     gaccgctcaa ataattatgt ggtcctaaag cacgagccca cattgtcttt ccggttcgtg      1980
     aatcaccctc gacgatgata ctaataggtc tctccggccg cgcagcggaa ccccttccga      2040
     aatagtcgtc aacccattct tgcataacaa ccggaacatt gatgaatgat gacaacggaa      2100
     atggaggaac ccatggttcc ggcgctttga cgaagatccg ttcgagatta gaacggatgt      2160
     tgtgatgttg aaggacgtaa tctttcggtt gttcttcctt caataccgac aaggcagatt      2220
     caattgaatc tgcgtttaat gcctttgcat atgagtcgtt ggcagactgc tgacctcctc      2280
     ttgcagatct gccgtcgact tggaattgtc cccattcgat tgtgactcca cctttgtcga      2340
     tgtatgcctt gacgtctgaa cttgatttag ctccctgaat gttcggatgg aaatgtgctg      2400
     acctggttga ggataccagg tcgaacaatc ttttatttgt gcagacgaat ttaccttcga      2460
     attgaataag cgcatgaaga tgaggttcac cattttcgtg acgttcctca cagaccttga      2520
     tgaatttttt atttgtcgct gtatgaattt tctgaagttg cgaaagagct tcttctttcg      2580
     gtatagagca acgaggataa gtgaggaaat agtttttgga ctgaactcta aatctttgag      2640
     gtgg                                                                   2644
//